mRNA_E-siliculosus-1a_M_contig8.16134.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: D8LQE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE7_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 1.050e-148 Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 1
Query: 247 MASNRSERLTVHQKKKLSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQADENDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL 906
MASNRSERLTVHQKKK+SRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQAD+NDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL
Sbjct: 1 MASNRSERLTVHQKKKMSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQADKNDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL 220
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.460e-12 Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = -3
Query: 1085 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLPSNGI 1243
L Q+E+CDLAADR RRSYDLVREQHNLSVSRIERR+S L+DALRK+PS +
Sbjct: 1098 LHRDQLEYCDLAADRQRRSYDLVREQHNLSVSRIERRNSALTDALRKVPSYAV 1150
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5JL71_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL71_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 9.200e-11 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = -3
Query: 1094 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLPS 1243
L Q+E+C LAAD RRSYDLVREQHNLSVSRIERR+S LSDALRK+PS
Sbjct: 825 LHRDQLEYCYLAADCQRRSYDLVREQHNLSVSRIERRNSALSDALRKVPS 874
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 2.330e-8 Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query: 1094 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLPS 1243
L Q+E+CDLAADR R SY LVR+QHNLSVSRIERR+S LS AL ++PS
Sbjct: 577 LHRDQLEYCDLAADRQRCSYGLVRQQHNLSVSRIERRNSALSGALCQVPS 626
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5K7Q6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q6_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.880e-7 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = -3
Query: 1097 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLP 1243
L Q+E+C+LA DR RR+YDLVRE + L +SR+ERRSS+L DA+ LP
Sbjct: 97 LARDQLEYCNLAVDRQRRAYDLVREYNALKISRVERRSSSLLDAIHNLP 145
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5L4A9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A9_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 9.200e-7 Identity = 27/49 (55.10%), Postives = 40/49 (81.63%), Query Frame = -3
Query: 1097 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLP 1243
L+ Q+E+C+LA DR RR+YDLVRE + L +SR+ERR+S++ DA+ K+P
Sbjct: 97 LDRDQLEYCNLAVDRQRRAYDLVREYNALKISRVERRNSSMLDAINKIP 145
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5L1P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1P1_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.620e-6 Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = -3
Query: 1097 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLP 1243
L +Q+E+C+LA DR RR+Y+LVRE + L +SR+ERR+S+L DA+ KLP
Sbjct: 63 LVRNQLEYCNLAVDRQRRAYELVREYNTLKISRVERRNSSLLDAIHKLP 111
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5L1V7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V7_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 2.410e-6 Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = -3
Query: 1097 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLP 1243
L Q+E+C+LA DR RR+Y+LVRE + L +SR+ERR+S+L DA+ KLP
Sbjct: 83 LARDQLEYCNLAVDRQRRAYELVREYNALKISRVERRNSSLLDAIHKLP 131
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5K2S7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2S7_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 2.780e-6 Identity = 27/49 (55.10%), Postives = 40/49 (81.63%), Query Frame = -3
Query: 1097 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLP 1243
L+ Q+E+C+LA DR RR+YDLVRE + L +SR+ERR+S++ DA+ K+P
Sbjct: 330 LDRDQLEYCNLAVDRQRRAYDLVREYNALKISRVERRNSSMLDAINKIP 378
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: A0A6H5K580_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K580_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 2.990e-6 Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = -3
Query: 1097 LESHQMEHCDLAADR*RRSYDLVREQHNLSVSRIERRSSTLSDALRKLP 1243
L Q+E+C+LA DR RR+Y+LVRE + L +SR+ERR+S+L DA+ KLP
Sbjct: 142 LARDQLEYCNLAVDRQRRAYELVREYNALKISRVERRNSSLLDAIHKLP 190 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16134.1 >prot_E-siliculosus-1a_M_contig8.16134.1 ID=prot_E-siliculosus-1a_M_contig8.16134.1|Name=mRNA_E-siliculosus-1a_M_contig8.16134.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=266bp MSVLCRTTLLGAAHRTARNCVRQRLELALVGNLEQQQQQHQQRRSMASNRback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1210022..1213364- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16134.1 ID=mRNA_E-siliculosus-1a_M_contig8.16134.1|Name=mRNA_E-siliculosus-1a_M_contig8.16134.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3343bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1210022..1213364- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1210022..1213364- >mRNA_E-siliculosus-1a_M_contig8.16134.1 ID=mRNA_E-siliculosus-1a_M_contig8.16134.1|Name=mRNA_E-siliculosus-1a_M_contig8.16134.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1596bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1210022..1213364- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |