prot_E-siliculosus-1a_M_contig8.16134.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16134.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16134.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length266
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Match: D8LQE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE7_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 2.280e-151
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 0 
Query:   46 MASNRSERLTVHQKKKLSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQADENDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL 265
            MASNRSERLTVHQKKK+SRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQAD+NDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL
Sbjct:    1 MASNRSERLTVHQKKKMSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQADKNDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL 220
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQE7_ECTSI2.280e-15199.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 136..256
e-value: 8.8E-8
score: 34.1
IPR023799Ribosome-binding factor A domain superfamilySUPERFAMILY89919Ribosome-binding factor A, RbfAcoord: 162..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1210367..1213253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16134.1mRNA_E-siliculosus-1a_M_contig8.16134.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1210022..1213364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16134.1 ID=prot_E-siliculosus-1a_M_contig8.16134.1|Name=mRNA_E-siliculosus-1a_M_contig8.16134.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=266bp
MSVLCRTTLLGAAHRTARNCVRQRLELALVGNLEQQQQQHQQRRSMASNR
SERLTVHQKKKLSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLREL
DDTTEVKRRGTYASKPLVSAAPQADENDDGRLLSERDAWAERMEGVWNEI
LQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSV
LRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVR
WQHVSEMPMSLQIEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023799RbfA_dom_sf
IPR015946KH_dom-like_a/b