prot_E-siliculosus-1a_M_contig8.16100.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16100.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16100.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length666
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16100.1 vs. uniprot
Match: D8LQH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH9_ECTSI)

HSP 1 Score: 727 bits (1877), Expect = 1.090e-256
Identity = 490/581 (84.34%), Postives = 502/581 (86.40%), Query Frame = 0
Query:   84 MAELMAEAHEKRLQAMEAVKKEVQRGYEEQIADLQSKLAALPSPADADKGAAVATAVRAEEPVLVGVGQGASVGSAGGAAQHPSYAARSARPGWEARWGAEEPARASPAVTAADVISMESRVAAASAPGSGAVHPAYAARAQRPGWEERWGTEESVRKTVTAASTSSSAEVAPQAQGKAAAPADVHPAYAGKPGGGGRSGADSARRRPGWEERWGSEEQARKTMTVAGTGSTSAAVEVATQALGTPSAPADVHPAYAGKPEGGERPGWAERWGSEEPARMTAATATPTSTGPAASAQAQSTAASPPADVHPAYAARAQRPGWEARWGSEEPARMTAATSTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAEAGAIAVAGAAAGFXXXXXXXXXXXXXXXXXXXXXXXXXXDVPLADEFLPADVAELRSMVVSNRRSFQDYLLKSLEASNELKQSNAKLESELSRSKARLAAEEQLRESLQESFLDYMSRSGDAGAAGKAQVAKLEKDVLTLAAEADELRRFTQEYMVKASSDKQNALEEAAATARAQSAERIAALQAQVLELQAG 664
            MAE MA+AHE RLQAMEAVKKEVQRGYEEQIADLQSKLAALP PADADKGAA ATA RAEEPVLVGVGQGAS+G AGGAAQHPSYAARSARPGWEARWGAEEPARASPAVTAADV SMESRVAAASAPG GAVHPAYAARAQRPGWEERWG EE  RKT+ AASTS+SAEV PQAQGKAAAPADVHPAYA +             +RPGWEERWG+EE ARKTMTVAG GSTSA  EVATQALGTP+APADVHPAYA + +   RPGW ERWGSEEPARMTAATA              STAASPPADVHPAYAARAQRPGWEARWGSEEPARM AATSTAGA            XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGA+AGAIAVAGAAAGF    X XXXXXXXXXXXXXXXXX   D PLADEFL  DVAELRSMVVSNRRSFQDYLLKSL ASNELKQSNA LE+ELSRSK RLAAEEQLRESLQESFL YMSRSGDAGAAGKAQVAKLEKDVLTLAAEADELRRFTQEYMVKASSDKQNALEEAAATARAQSAERIAALQAQVLELQAG
Sbjct:    1 MAEFMAKAHENRLQAMEAVKKEVQRGYEEQIADLQSKLAALPPPADADKGAAAATAFRAEEPVLVGVGQGASMGFAGGAAQHPSYAARSARPGWEARWGAEEPARASPAVTAADVSSMESRVAAASAPGGGAVHPAYAARAQRPGWEERWGMEEPARKTMAAASTSASAEVVPQAQGKAAAPADVHPAYAART------------QRPGWEERWGAEEPARKTMTVAGAGSTSAPAEVATQALGTPAAPADVHPAYAARTQ---RPGWEERWGSEEPARMTAATAXXXXXXXXXXXXXXSTAASPPADVHPAYAARAQRPGWEARWGSEEPARMIAATSTAGAPTASGKTALPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADAGAIAVAGAAAGFATAGXLXXXXXXXXXXXXXXXXXGAGDDPLADEFLTDDVAELRSMVVSNRRSFQDYLLKSLWASNELKQSNAVLEAELSRSKVRLAAEEQLRESLQESFLGYMSRSGDAGAAGKAQVAKLEKDVLTLAAEADELRRFTQEYMVKASSDKQNALEEAAATARAQSAERIAALQAQVLELQAG 566          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16100.1 vs. uniprot
Match: A0A6H5KQ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ96_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 9.950e-82
Identity = 202/298 (67.79%), Postives = 209/298 (70.13%), Query Frame = 0
Query:  368 ATPTSTGPAASAQAQSTAASPPA-DVHPAYAARAQRPGWEARWGSEEPARMTAATSTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAEAGAIAVAGAAAGFXXXXXXXXXXXXXXXXXXXXXXXXXXDVPLADEFLPADVAELRSMVVSNRRSFQDYLLKSLEASNELKQSNAKLESELSRSKARLAAEEQLRESLQESFLDYMSRSGDAGAAGKAQVAKLEKDVLTLAAEADELRRFTQEYMVKASSDKQNALEEAAATARAQSAERIAALQAQVLELQAG 664
            AT T+  PAAS +     ASP A D+HPAYAAR  RPGWEARWGSEE  R+                                                 AGAEAGAIAV       XXXXXXXXXXXXX             D PLADEFLP DVAELRSMVVSNRRSFQDYLLKSLEASNELKQSNAKLE ELSR+KARLAAEEQLRESLQ+SFLDYMSRSGDAGAAGKAQVAKLEKDVL LAAEADELRRFTQEYMVKASSDKQNAL+EAAATARAQSA RIAALQAQVLELQAG
Sbjct:    4 ATCTAVSPAASGK----TASPDAEDLHPAYAARLGRPGWEARWGSEEKERV-------------------------------------------------AGAEAGAIAVXXXXXXXXXXXXXXXXXXXXADEASAGSGGAGDD-PLADEFLPDDVAELRSMVVSNRRSFQDYLLKSLEASNELKQSNAKLEVELSRAKARLAAEEQLRESLQKSFLDYMSRSGDAGAAGKAQVAKLEKDVLALAAEADELRRFTQEYMVKASSDKQNALQEAAATARAQSAGRIAALQAQVLELQAG 247          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16100.1 vs. uniprot
Match: A0A835Z6M2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.820e-10
Identity = 59/162 (36.42%), Postives = 80/162 (49.38%), Query Frame = 0
Query:   84 MAELMAEAHEKRLQAMEAVKKEVQRGYEEQIADLQSKLAALPSPADADKGAAVATAVRAEEPVLVGVGQGASVGSAGGAAQHPSYAARSARPGWEARWGAEEPARAS-PAVTAADVISMESRVAAASAPGSGAVHPAYAARAQRPGWEERWGTEESVRKTVT 244
            MA+L+  A + RL +M+A++KE+   +  Q A ++ ++AAL     A  GAA   A  A  PV                + H +YAAR  R GWE RWG +E AR S    TA    +  +            VHPAY AR QR GWE+RWG+ E  R + T
Sbjct:    1 MADLVLSAQQSRLNSMDALRKELDSAFNAQAASVKDEIAALKP--QAVNGAAAVPAHTATVPVP---------------SVHAAYAARLTRKGWEDRWGDDEVARVSGDGATALQASAAPAAXXXXXXXXXXXVHPAYLARTQRAGWEDRWGSSEVQRTSGT 145          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQH9_ECTSI1.090e-25684.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ96_9PHAE9.950e-8267.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6M2_9STRA1.820e-1036.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..109
NoneNo IPR availableCOILSCoilCoilcoord: 547..581
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..665
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:820583..827271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16100.1mRNA_E-siliculosus-1a_M_contig8.16100.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 819512..827301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16100.1 ID=prot_E-siliculosus-1a_M_contig8.16100.1|Name=mRNA_E-siliculosus-1a_M_contig8.16100.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=666bp
MGSLRATDLVLAAAVASLCCAVNGFTPPTAVVVGNNAACFRTAGGTSTAA
AAIQPHQRRRRRGLPSLRAAEGEDDGIEEYKRQMAELMAEAHEKRLQAME
AVKKEVQRGYEEQIADLQSKLAALPSPADADKGAAVATAVRAEEPVLVGV
GQGASVGSAGGAAQHPSYAARSARPGWEARWGAEEPARASPAVTAADVIS
MESRVAAASAPGSGAVHPAYAARAQRPGWEERWGTEESVRKTVTAASTSS
SAEVAPQAQGKAAAPADVHPAYAGKPGGGGRSGADSARRRPGWEERWGSE
EQARKTMTVAGTGSTSAAVEVATQALGTPSAPADVHPAYAGKPEGGERPG
WAERWGSEEPARMTAATATPTSTGPAASAQAQSTAASPPADVHPAYAARA
QRPGWEARWGSEEPARMTAATSTAGAPASSGKTTSPDAEDLHPAYAARSG
RPGWEARWGSEEKERVAGAEAGAIAVAGAAAGFATAGGLDAAASTAAAGE
ASAGSGGAGDVPLADEFLPADVAELRSMVVSNRRSFQDYLLKSLEASNEL
KQSNAKLESELSRSKARLAAEEQLRESLQESFLDYMSRSGDAGAAGKAQV
AKLEKDVLTLAAEADELRRFTQEYMVKASSDKQNALEEAAATARAQSAER
IAALQAQVLELQAGA*
back to top