prot_E-siliculosus-1a_M_contig8.16051.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16051.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16051.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length597
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 1002 bits (2590), Expect = 0.000e+0
Identity = 534/596 (89.60%), Postives = 546/596 (91.61%), Query Frame = 0
Query:    1 MAGRGRGGRFGAWGGNSRGKSGASGRGGGDAAALARVLNKADCCACISNAPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACTLEGVGNFTARRMLRGLPPAGAEPDNSSGVRRTDEENIEPSGSXXXXXXXXXXXXXXXXXXXXXXGTTSVTSAGAGSRLPSDTNSLLRMDLRVGSSATATTGGRPLSLASNFAALRGGGGETTPDVTPKRPTSRARREEAGGETVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGLADDDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGGCGRRGHSSADLSVGGPYCVDGWDVEPMNQDDPY 596
            MAGRGRGGRFG   GNS GK  ASGRGG DA+ALARVLN ADCCAC+SN PLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEAC LEGVG+FTARRMLRGLPPAG EP+NSSGVRRTDEENIEPSGS                      GT+SVT+A AGSRLPSDTNSLLRM+LRVGSSAT TTGGRPLSLASNFAALRGGG ETTPDVTPKRPTSRAR+EEA GET RSSKAPSFFSGQWEAWL+VDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARK DDP SEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCD LR TV+FLARTHRHIASLLE SCRR AGL PV GSRECSGG AML PAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDG+A DDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGG GRRGHS+ADLSVGGPYCVDGWDVEPMNQDDPY
Sbjct:    1 MAGRGRGGRFGGQDGNSHGKIVASGRGGSDASALARVLNTADCCACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSSGVRRTDEENIEPSGSSSSRGGGARKSSNKST------GTSSVTNADAGSRLPSDTNSLLRMNLRVGSSATTTTGGRPLSLASNFAALRGGGEETTPDVTPKRPTSRARKEEASGETARSSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELSCRREAGLSPVRGSRECSGGRAMLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGIAGDDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGGYGRRGHSNADLSVGGPYCVDGWDVEPMNQDDPY 590          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 194 bits (493), Expect = 7.610e-54
Identity = 127/297 (42.76%), Postives = 162/297 (54.55%), Query Frame = 0
Query:  248 SFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDDPA----SEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGLADDDAARMKRADALLGGLVCSGGA--GTNKLPQPLRRLLCRLFLGD 538
            SF  G W   LI D RE    + Q+++L   + CE R LPLGDMLW+AR  D  +     EVLLGYIVERKTASDL SS++DGR+ EQK R+   GL R IYLVEG + H  +L PA LRTA+  +QA  G+ V+   ++  +V  L R HRHIA+ LE +CR      P  G R          P M+  +Y   C K      VR V G  +RQ  GCSAARA AI+  + +PL  MLA+E A   +           R   LL G+    GA     KL +PL+  LC+L+  D
Sbjct:    7 SFAGGIWTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGRFHEQKHRMARHGLGRVIYLVEGPITHTTRLTPAHLRTAMAHTQAQDGMTVLWTANVTESVAHLQRVHRHIAASLEAACRGITASAPGTGVR----------PIMSMDQYRAQCGKGKDGD-VRYVFGCQLRQVYGCSAARAAAILNEYPTPLDFMLAMEAAGESE-----------RCLELLAGIKGEPGARMAEAKLTKPLQAALCKLYADD 281          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK)

HSP 1 Score: 129 bits (324), Expect = 6.890e-30
Identity = 92/245 (37.55%), Postives = 126/245 (51.43%), Query Frame = 0
Query:  270 VQSSLLQKGIRCETRQLPLGDMLWIAR------KGDDPASEVL--------------------------LGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLM 482
            VQ+ LL  G+ CE  QL +GDM+W AR        D P ++ L                          LG++VERKTA DLA SIIDGRY EQK RLK SGL +  YLVEG+L+ Q+ L   +LRTA+ S+    G +V +C +L  +V +LARTH  +A  L  +        P+   +      A+L P MTY  Y   C K   +  V+ + G  ++Q PG S  + +AI+  F +P  LM
Sbjct:    2 VQAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQVARQLGYAVAAAQSGDPLDSFK------AVL-PVMTYRHYHDQCGKLK-AQKVQDIFGMQLKQFPGMSVGKIQAILERFPTPQRLM 238          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.430e-26
Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 0
Query:  238 GETVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIA--RKGDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLL 401
            GE    S+ P          L+ D+RE    +VQS LLQ+G+ CE R L LGDM+WIA  R+ D    E +L +I+ERK+A+DLA SIIDGRY EQK RL+ SG+    YLVEG  + QE+L   ALRTA+  ++   G  V+  +++  + + L R H  I SL+
Sbjct:  418 GERRPDSRCPPVPFEDLSVILVQDHRETRKDAVQSHLLQRGVSCENRALHLGDMIWIAQDRRSD---VEYVLDFIIERKSAADLAESIIDGRYAEQKSRLRASGIGHVTYLVEGAASSQERLPKQALRTAMAETRVLPGFRVLHTNNIAQSAEELRRMHEQIKSLM 580          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A4D9DDT9_9STRA (ERCC4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDT9_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.870e-24
Identity = 101/295 (34.24%), Postives = 140/295 (47.46%), Query Frame = 0
Query:  253 QWEAWLIVDNREHEFM-SVQSSLLQKGIRCETRQLPLGDMLWIARK-------GD-----------DPAS---------------EVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSG--LRRRIYLVEGNLNH-QEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHI----ASLLEQSCRRG-----AGLWPVGGSRECSGGGAMLG------------PA---MTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALE 486
            +WE   ++D  EHE   S++++LLQ GIRCE R L L D+LW+AR+       GD           DP                 E++L Y++ERKT  DLASSI DGRY EQK R+   G  + R  YLVEG L    + + PAALRTAL+S+Q   G+ V+Q  SL  T+  L R H  I    A  L+ +C          L P   S +       L             PA   +   EY   C K  G+ +VR +  A +      S A+++A+V A+ +P  L  A++
Sbjct:  350 EWEVVALLDRVEHENNPSIEATLLQAGIRCEVRVLRLADVLWVARRRAEGRLGGDGGGRAAAGIAVDPGDAGGLREGGHPTEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDMIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRISHEFAHFLQAACGHNRLNSEGDLLPATESFDGLAQSERLSEYLQKHSKAFPLPASRIIRLAEYQHLCRKTVGNLSVRAMFTAQLCAIDKVSEAKSKAVVNAYSTPSRLARAMQ 644          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A1V9ZBA3_9STRA (Crossover junction endonuclease MUS81-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBA3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.770e-23
Identity = 89/246 (36.18%), Postives = 122/246 (49.59%), Query Frame = 0
Query:  253 QWEAWLIVDNRE----HEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDDP-----ASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQS--CRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCA--KRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLAL 485
            +WE  L++D+RE          +  LL+  + CE R L LGDMLWIAR+G          E +L  +VERK  +DLA SIID RY EQK+RL  SGLR  +YLVEG+L+ +  +  A LRTAL  +Q      V    +   TV FLA  H H+     +S  CR  A     G               M++  YA   A  ++  + +  ++   M+ Q PG SA RA+A+  A  +   L  AL
Sbjct:  264 EWEVVLLLDHREMLSRRNPAVFERKLLEAHVTCEVRALHLGDMLWIARRGRQDQGRTVVEEFVLDVVVERKAVTDLALSIIDKRYTEQKQRLAESGLRYVVYLVEGSLSTETAIGAAGLRTALTRTQVLNNYLVHHAATADETVAFLAALHWHVVGAFRESYRCRNCAPPTSAGPPPPAPLVDFTQLLPMSWQPYADFNATFRKKAAPSAGELYQMMLMQIPGISAGRAQALGTAHPTFASLWAAL 509          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A673AFK1_9TELE (MUS81 structure-specific endonuclease subunit n=7 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AFK1_9TELE)

HSP 1 Score: 115 bits (287), Expect = 2.990e-23
Identity = 89/270 (32.96%), Postives = 128/270 (47.41%), Query Frame = 0
Query:  242 RSSKAPSFFSGQWEAWLIVDNRE------HEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKG---------DDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVE--GNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQS---CRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASG 491
            R   A     G ++  L VD  E      H    +   L + G+  + R+L +GD LW+AR+            P  E++L YIVERK   DL  SIIDGR+ EQK RLK  GLRR IYLVE  G+      L   +L+ A+V++Q   G  V +   +R +  +L    R++  L +     CR       VGG  E  G G      +++ E+  G  K     TVR+V    + Q  G S  +A AI+  + +P  L+ A E+ +SG
Sbjct:  301 RRPDAGRLLPGTYQIILCVDFIETTGGSHHRKQELVKELQRNGVNFDIRKLNVGDFLWVARENVAPIPGQLRAPPGRELVLDYIVERKRMDDLCGSIIDGRFREQKFRLKRCGLRRPIYLVEECGSAASHLSLPETSLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRYLTKLYQNRTLVCRSRELEGDVGGDEEEGGRGLPSCSLISFAEFNHGATKNK-CQTVREVFARQLMQISGLSGDKAAAILEQYSTPHSLLTAYEKCSSG 569          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A067BND5_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BND5_SAPPC)

HSP 1 Score: 112 bits (279), Expect = 3.250e-23
Identity = 93/253 (36.76%), Postives = 125/253 (49.41%), Query Frame = 0
Query:  253 QWEAWLIVDNREHEFMSVQS----SLLQKGIRCETRQLPLGDMLWIARK------GDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWP----VGGSRECSGGGAMLGPA--MTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAA 489
            +WE  L++D+RE    S +S     LL+ G+ CE R L LGDM+WIAR+      G     E +L  IVERK  SDLA SIID RY EQK+RL  +GLR  +YL+EG+L  +  L   AL TAL  +Q      V    S   TV FL+  H H         +      P    +G    C      L P    ++GE+ +   K+A  TT  ++   M+ Q PG SA RA  +  A  + L L    ++AA
Sbjct:   84 EWEIVLLLDHREMVSRSNKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHRPTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPTAASIGRLPACLRDFTQLIPTTWQSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 335          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: UPI001EB09496 (crossover junction endonuclease MUS81-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB09496)

HSP 1 Score: 115 bits (287), Expect = 5.380e-23
Identity = 99/298 (33.22%), Postives = 148/298 (49.66%), Query Frame = 0
Query:  217 ETTPDVTPKRPTSRARREEAGGETVRSSKAPSFFS---GQWEAWLIVDNREHEFMSVQSS------LLQKGIRCETRQLPLGDMLWIARKGDDP---------ASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVE--GNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLE----QSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAAS 490
            ET PD+TP    S A  + +   +  SS  P  FS   G ++  L VDNRE    S   S      L++ G+ C+ R+L +GDMLWIAR+   P           E++L +I+ERK   DL SS+IDGR+ EQK RLK SG+   IYL+E  G+L H   +A   ++ A+V++Q   G  + +   ++ TV +L    R++ S       Q+C     L  + GS        +L     +  YA   +K     TVR++ G  + Q  G SA +A+AI   + +P  +  A +R  S
Sbjct:  562 ETLPDITPA--FSAAGSQASSVTSAGSSLPPPDFSLTPGSFDVVLCVDNREFYGGSKSQSKTLLPELIKNGVECDLRELQIGDMLWIARERLQPQPGQLQRPKGRELVLDFIIERKRMDDLVSSMIDGRFREQKFRLKRSGIANAIYLIEDYGSLQHFS-IAEDRIKQAIVNTQVIDGFKMKRTSGVKETVAYLTVMTRYLQSFYRTKSLQACTPEM-LRELDGSFHIEESEKLL-TTFQHFNYASVKSK---DLTVRELFGKQLIQLHGMSADKAKAITDRYPTPTSIFRAYDRCIS 851          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A067CHT1_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHT1_SAPPC)

HSP 1 Score: 114 bits (284), Expect = 5.410e-23
Identity = 94/253 (37.15%), Postives = 125/253 (49.41%), Query Frame = 0
Query:  253 QWEAWLIVDNREHEFMSVQS----SLLQKGIRCETRQLPLGDMLWIARK------GDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGS----RECSGGGAMLGPA--MTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAA 489
            +WE  L++D+RE    S +S     LL+ G+ CE R L LGDM+WIAR+      G     E +L  IVERK  SDLA SIID RY EQK+RL  +GLR  +YL+EG+L  +  L   AL TAL  +Q      V    S   TV FL+  H H         +      PV  S      C      L P    ++GE+ +   K+A  TT  ++   M+ Q PG SA RA  +  A  + L L    ++AA
Sbjct:  275 EWEIVLLLDHREMVSRSSKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHRPTFGGRPIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPVAASIGRPPACLRDFTQLIPTTWQSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 526          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE0.000e+089.60ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA7.610e-5442.76Restriction endonuclease type II-like protein n=1 ... [more]
A0A7S3XK47_HETAK6.890e-3037.55Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7R9UCP7_9STRA5.430e-2643.98Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9DDT9_9STRA6.870e-2434.24ERCC4 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A1V9ZBA3_9STRA2.770e-2336.18Crossover junction endonuclease MUS81-like protein... [more]
A0A673AFK1_9TELE2.990e-2332.96MUS81 structure-specific endonuclease subunit n=7 ... [more]
A0A067BND5_SAPPC3.250e-2336.76ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]
UPI001EB094965.380e-2333.22crossover junction endonuclease MUS81-like n=2 Tax... [more]
A0A067CHT1_SAPPC5.410e-2337.15ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006166ERCC4 domainSMARTSM00891ERCC4_2coord: 257..351
e-value: 6.8E-24
score: 95.4
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 260..391
e-value: 2.4E-22
score: 79.8
NoneNo IPR availableGENE3D3.40.50.10130coord: 283..462
e-value: 4.9E-39
score: 136.0
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 67..164
coord: 227..496
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 49..114
e-value: 6.0E-7
score: 31.5
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 56..109
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 254..396

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:263092..267209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16051.1mRNA_E-siliculosus-1a_M_contig8.16051.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 263092..267613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16051.1 ID=prot_E-siliculosus-1a_M_contig8.16051.1|Name=mRNA_E-siliculosus-1a_M_contig8.16051.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=597bp
MAGRGRGGRFGAWGGNSRGKSGASGRGGGDAAALARVLNKADCCACISNA
PLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACTLEG
VGNFTARRMLRGLPPAGAEPDNSSGVRRTDEENIEPSGSSSSRGGGGGGG
GGARKASNNTTGTTSVTSAGAGSRLPSDTNSLLRMDLRVGSSATATTGGR
PLSLASNFAALRGGGGETTPDVTPKRPTSRARREEAGGETVRSSKAPSFF
SGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDD
PASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGN
LNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASL
LEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVR
QVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGLADDDAA
RMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAG
GVGAAGPPTAAGGCGRRGHSSADLSVGGPYCVDGWDVEPMNQDDPY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR006166ERCC4_domain