mRNA_E-siliculosus-1a_M_contig8.16051.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE) HSP 1 Score: 1003 bits (2593), Expect = 0.000e+0 Identity = 534/596 (89.60%), Postives = 546/596 (91.61%), Query Frame = 1
Query: 1 MAGRGRGGRFGAWGGNSRGKSGASGRGGGDAAALARVLNKADCCACISNAPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACTLEGVGNFTARRMLRGLPPAGAEPDNSSGVRRTDEENIEPSGSXXXXXXXXXXXXXXXXXXXXXXGTTSVTSAGAGSRLPSDTNSLLRMDLRVGSSATATTGGRPLSLASNFAALRGGGGETTPDVTPKRPTSRARREEAGGETVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGLADDDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGGCGRRGHSSADLSVGGPYCVDGWDVEPMNQDDPY 1788
MAGRGRGGRFG GNS GK ASGRGG DA+ALARVLN ADCCAC+SN PLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEAC LEGVG+FTARRMLRGLPPAG EP+NSSGVRRTDEENIEPSGS GT+SVT+A AGSRLPSDTNSLLRM+LRVGSSAT TTGGRPLSLASNFAALRGGG ETTPDVTPKRPTSRAR+EEA GET RSSKAPSFFSGQWEAWL+VDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARK DDP SEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCD LR TV+FLARTHRHIASLLE SCRR AGL PV GSRECSGG AML PAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDG+A DDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGG GRRGHS+ADLSVGGPYCVDGWDVEPMNQDDPY
Sbjct: 1 MAGRGRGGRFGGQDGNSHGKIVASGRGGSDASALARVLNTADCCACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSSGVRRTDEENIEPSGSSSSRGGGARKSSNKST------GTSSVTNADAGSRLPSDTNSLLRMNLRVGSSATTTTGGRPLSLASNFAALRGGGEETTPDVTPKRPTSRARKEEASGETARSSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELSCRREAGLSPVRGSRECSGGRAMLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGIAGDDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGGYGRRGHSNADLSVGGPYCVDGWDVEPMNQDDPY 590
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA) HSP 1 Score: 194 bits (493), Expect = 5.910e-53 Identity = 127/297 (42.76%), Postives = 162/297 (54.55%), Query Frame = 1
Query: 742 SFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDDPA----SEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASGDGLADDDAARMKRADALLGGLVCSGGA--GTNKLPQPLRRLLCRLFLGD 1614
SF G W LI D RE + Q+++L + CE R LPLGDMLW+AR D + EVLLGYIVERKTASDL SS++DGR+ EQK R+ GL R IYLVEG + H +L PA LRTA+ +QA G+ V+ ++ +V L R HRHIA+ LE +CR P G R P M+ +Y C K VR V G +RQ GCSAARA AI+ + +PL MLA+E A + R LL G+ GA KL +PL+ LC+L+ D
Sbjct: 7 SFAGGIWTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGRFHEQKHRMARHGLGRVIYLVEGPITHTTRLTPAHLRTAMAHTQAQDGMTVLWTANVTESVAHLQRVHRHIAASLEAACRGITASAPGTGVR----------PIMSMDQYRAQCGKGKDGD-VRYVFGCQLRQVYGCSAARAAAILNEYPTPLDFMLAMEAAGESE-----------RCLELLAGIKGEPGARMAEAKLTKPLQAALCKLYADD 281
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK) HSP 1 Score: 129 bits (324), Expect = 1.350e-29 Identity = 92/245 (37.55%), Postives = 126/245 (51.43%), Query Frame = 1
Query: 808 VQSSLLQKGIRCETRQLPLGDMLWIAR------KGDDPASEVL--------------------------LGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLM 1446
VQ+ LL G+ CE QL +GDM+W AR D P ++ L LG++VERKTA DLA SIIDGRY EQK RLK SGL + YLVEG+L+ Q+ L +LRTA+ S+ G +V +C +L +V +LARTH +A L + P+ + A+L P MTY Y C K + V+ + G ++Q PG S + +AI+ F +P LM
Sbjct: 2 VQAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQVARQLGYAVAAAQSGDPLDSFK------AVL-PVMTYRHYHDQCGKLK-AQKVQDIFGMQLKQFPGMSVGKIQAILERFPTPQRLM 238
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.180e-25 Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 1
Query: 712 GETVRSSKAPSFFSGQWEAWLIVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIA--RKGDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLL 1203
GE S+ P L+ D+RE +VQS LLQ+G+ CE R L LGDM+WIA R+ D E +L +I+ERK+A+DLA SIIDGRY EQK RL+ SG+ YLVEG + QE+L ALRTA+ ++ G V+ +++ + + L R H I SL+
Sbjct: 418 GERRPDSRCPPVPFEDLSVILVQDHRETRKDAVQSHLLQRGVSCENRALHLGDMIWIAQDRRSD---VEYVLDFIIERKSAADLAESIIDGRYAEQKSRLRASGIGHVTYLVEGAASSQERLPKQALRTAMAETRVLPGFRVLHTNNIAQSAEELRRMHEQIKSLM 580
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A4D9DDT9_9STRA (ERCC4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDT9_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.360e-23 Identity = 101/295 (34.24%), Postives = 140/295 (47.46%), Query Frame = 1
Query: 757 QWEAWLIVDNREHEFM-SVQSSLLQKGIRCETRQLPLGDMLWIARK-------GD-----------DPAS---------------EVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSG--LRRRIYLVEGNLNH-QEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHI----ASLLEQSCRRG-----AGLWPVGGSRECSGGGAMLG------------PA---MTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALE 1458
+WE ++D EHE S++++LLQ GIRCE R L L D+LW+AR+ GD DP E++L Y++ERKT DLASSI DGRY EQK R+ G + R YLVEG L + + PAALRTAL+S+Q G+ V+Q SL T+ L R H I A L+ +C L P S + L PA + EY C K G+ +VR + A + S A+++A+V A+ +P L A++
Sbjct: 350 EWEVVALLDRVEHENNPSIEATLLQAGIRCEVRVLRLADVLWVARRRAEGRLGGDGGGRAAAGIAVDPGDAGGLREGGHPTEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDMIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRISHEFAHFLQAACGHNRLNSEGDLLPATESFDGLAQSERLSEYLQKHSKAFPLPASRIIRLAEYQHLCRKTVGNLSVRAMFTAQLCAIDKVSEAKSKAVVNAYSTPSRLARAMQ 644
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A1V9ZBA3_9STRA (Crossover junction endonuclease MUS81-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBA3_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.900e-23 Identity = 89/246 (36.18%), Postives = 122/246 (49.59%), Query Frame = 1
Query: 757 QWEAWLIVDNRE----HEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKGDDP-----ASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQS--CRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCA--KRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLAL 1455
+WE L++D+RE + LL+ + CE R L LGDMLWIAR+G E +L +VERK +DLA SIID RY EQK+RL SGLR +YLVEG+L+ + + A LRTAL +Q V + TV FLA H H+ +S CR A G M++ YA A ++ + + ++ M+ Q PG SA RA+A+ A + L AL
Sbjct: 264 EWEVVLLLDHREMLSRRNPAVFERKLLEAHVTCEVRALHLGDMLWIARRGRQDQGRTVVEEFVLDVVVERKAVTDLALSIIDKRYTEQKQRLAESGLRYVVYLVEGSLSTETAIGAAGLRTALTRTQVLNNYLVHHAATADETVAFLAALHWHVVGAFRESYRCRNCAPPTSAGPPPPAPLVDFTQLLPMSWQPYADFNATFRKKAAPSAGELYQMMLMQIPGISAGRAQALGTAHPTFASLWAAL 509
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A067BND5_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BND5_SAPPC) HSP 1 Score: 112 bits (279), Expect = 5.060e-23 Identity = 93/253 (36.76%), Postives = 125/253 (49.41%), Query Frame = 1
Query: 757 QWEAWLIVDNREHEFMSVQS----SLLQKGIRCETRQLPLGDMLWIARK------GDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWP----VGGSRECSGGGAMLGPA--MTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAA 1467
+WE L++D+RE S +S LL+ G+ CE R L LGDM+WIAR+ G E +L IVERK SDLA SIID RY EQK+RL +GLR +YL+EG+L + L AL TAL +Q V S TV FL+ H H + P +G C L P ++GE+ + K+A TT ++ M+ Q PG SA RA + A + L L ++AA
Sbjct: 84 EWEIVLLLDHREMVSRSNKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHRPTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPTAASIGRLPACLRDFTQLIPTTWQSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 335
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A673AFK1_9TELE (MUS81 structure-specific endonuclease subunit n=7 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AFK1_9TELE) HSP 1 Score: 115 bits (287), Expect = 5.540e-23 Identity = 89/270 (32.96%), Postives = 128/270 (47.41%), Query Frame = 1
Query: 724 RSSKAPSFFSGQWEAWLIVDNRE------HEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKG---------DDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVE--GNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQS---CRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASG 1473
R A G ++ L VD E H + L + G+ + R+L +GD LW+AR+ P E++L YIVERK DL SIIDGR+ EQK RLK GLRR IYLVE G+ L +L+ A+V++Q G V + +R + +L R++ L + CR VGG E G G +++ E+ G K TVR+V + Q G S +A AI+ + +P L+ A E+ +SG
Sbjct: 301 RRPDAGRLLPGTYQIILCVDFIETTGGSHHRKQELVKELQRNGVNFDIRKLNVGDFLWVARENVAPIPGQLRAPPGRELVLDYIVERKRMDDLCGSIIDGRFREQKFRLKRCGLRRPIYLVEECGSAASHLSLPETSLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRYLTKLYQNRTLVCRSRELEGDVGGDEEEGGRGLPSCSLISFAEFNHGATKNK-CQTVREVFARQLMQISGLSGDKAAAILEQYSTPHSLLTAYEKCSSG 569
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: A0A067CHT1_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHT1_SAPPC) HSP 1 Score: 114 bits (284), Expect = 9.590e-23 Identity = 94/253 (37.15%), Postives = 125/253 (49.41%), Query Frame = 1
Query: 757 QWEAWLIVDNREHEFMSVQS----SLLQKGIRCETRQLPLGDMLWIARK------GDDPASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLEQSCRRGAGLWPVGGS----RECSGGGAMLGPA--MTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAA 1467
+WE L++D+RE S +S LL+ G+ CE R L LGDM+WIAR+ G E +L IVERK SDLA SIID RY EQK+RL +GLR +YL+EG+L + L AL TAL +Q V S TV FL+ H H + PV S C L P ++GE+ + K+A TT ++ M+ Q PG SA RA + A + L L ++AA
Sbjct: 275 EWEIVLLLDHREMVSRSSKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHRPTFGGRPIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPVAASIGRPPACLRDFTQLIPTTWQSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 526
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Match: UPI001EB09496 (crossover junction endonuclease MUS81-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB09496) HSP 1 Score: 115 bits (287), Expect = 1.120e-22 Identity = 99/298 (33.22%), Postives = 148/298 (49.66%), Query Frame = 1
Query: 649 ETTPDVTPKRPTSRARREEAGGETVRSSKAPSFFS---GQWEAWLIVDNREHEFMSVQSS------LLQKGIRCETRQLPLGDMLWIARKGDDP---------ASEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVE--GNLNHQEQLAPAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIASLLE----QSCRRGAGLWPVGGSRECSGGGAMLGPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAAS 1470
ET PD+TP S A + + + SS P FS G ++ L VDNRE S S L++ G+ C+ R+L +GDMLWIAR+ P E++L +I+ERK DL SS+IDGR+ EQK RLK SG+ IYL+E G+L H +A ++ A+V++Q G + + ++ TV +L R++ S Q+C L + GS +L + YA +K TVR++ G + Q G SA +A+AI + +P + A +R S
Sbjct: 562 ETLPDITPA--FSAAGSQASSVTSAGSSLPPPDFSLTPGSFDVVLCVDNREFYGGSKSQSKTLLPELIKNGVECDLRELQIGDMLWIARERLQPQPGQLQRPKGRELVLDFIIERKRMDDLVSSMIDGRFREQKFRLKRSGIANAIYLIEDYGSLQHFS-IAEDRIKQAIVNTQVIDGFKMKRTSGVKETVAYLTVMTRYLQSFYRTKSLQACTPEM-LRELDGSFHIEESEKLL-TTFQHFNYASVKSK---DLTVRELFGKQLIQLHGMSADKAKAITDRYPTPTSIFRAYDRCIS 851 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16051.1 >prot_E-siliculosus-1a_M_contig8.16051.1 ID=prot_E-siliculosus-1a_M_contig8.16051.1|Name=mRNA_E-siliculosus-1a_M_contig8.16051.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=597bp MAGRGRGGRFGAWGGNSRGKSGASGRGGGDAAALARVLNKADCCACISNAback to top mRNA from alignment at E-siliculosus-1a_M_contig8:263092..267613+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16051.1 ID=mRNA_E-siliculosus-1a_M_contig8.16051.1|Name=mRNA_E-siliculosus-1a_M_contig8.16051.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4522bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:263092..267613+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:263092..267613+ >mRNA_E-siliculosus-1a_M_contig8.16051.1 ID=mRNA_E-siliculosus-1a_M_contig8.16051.1|Name=mRNA_E-siliculosus-1a_M_contig8.16051.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3582bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:263092..267613+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |