prot_E-siliculosus-1a_F_contig1047.340.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1047.340.1
Unique Nameprot_E-siliculosus-1a_F_contig1047.340.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length289
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 2.310e-189
Identity = 275/288 (95.49%), Postives = 278/288 (96.53%), Query Frame = 0
Query:    1 MPVASAVRKVAVVGHAQLLGARHRATTTSALPRRQCCGGSGTRSASTKAPAQPPPTGAPKPTKPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVDVTSSHK 288
            MPVASAVRKVA+VGH QLLGARHRATTTSALPRRQCCGGSGTRSASTK PAQPPPTGAPKPTKPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEE SSAQ VD+HE  EPFGDGGA SVASEIDWGRTLRFTFVGAA+VAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAP FLAVFLSTVMLLDGNAAKIDRKLRADY TTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPA VDVTSSHK
Sbjct:    1 MPVASAVRKVAIVGHTQLLGARHRATTTSALPRRQCCGGSGTRSASTKVPAQPPPTGAPKPTKPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHVDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAAVDVTSSHK 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 5.150e-144
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0
Query:   72 MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVDVTSSHK 288
            MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEE+SSAQDVDE EH EPFGDGGARSVASEIDWGRTLRFTFVGAA+VAPALHAWYGFLI+RLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTT+VSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGV VTSSHK
Sbjct:    1 MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVGVTSSHK 217          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.580e-50
Identity = 96/204 (47.06%), Postives = 123/204 (60.29%), Query Frame = 0
Query:   68 SIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 271
            + +  Y SLLE+ PL+TK  T GAIA  GD+ CQL+                ++E E  +P            +D  R   FTF+G  L++P LH WYGFL  RLPG + A V KR+ALDQL FAP FL VFLS+V+ L+GN  +I  KLRAD+ T   +NWG W+PAQ++NFRFV    QVL++N VG  WN YLSY S+  V
Sbjct:   35 NAWDSYTSLLETHPLSTKIATGGAIAGLGDMGCQLV----------------LEEKEKHKPL-----------LDVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGNKEQIPDKLRADWWTVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHADV 211          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.270e-49
Identity = 101/209 (48.33%), Postives = 125/209 (59.81%), Query Frame = 0
Query:   68 SIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQL-----LALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 271
            +I   Y+ LLE+ P+ATKA+TS AIA  GD+ CQ+     LA   A   E  S+A   D           G+ S    +DW R  RF  +  AL APA HAWYG L R LPG       KR+ALDQ +F+P F+ VF S +M+L+G AA+I  KLR DY TT+VSNW  W+PAQ+ NFR V   YQV  AN VG FWN YLS+QS K +
Sbjct:   46 NIIQSYSRLLETNPIATKALTSAAIAGMGDIGCQIYTNRGLAAAAAGAGEAGSNAGAAD------GAATWGSTSQQRHLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKKI 248          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: W2Q4U2_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q4U2_PHYPN)

HSP 1 Score: 171 bits (433), Expect = 6.590e-49
Identity = 99/214 (46.26%), Postives = 129/214 (60.28%), Query Frame = 0
Query:   69 IFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVD 282
            ++  Y SLLE+ PL+TK VT GAIA  GDV CQL                 V E E      DG A+     +D  R   FTF+G  L++PALH WYGFL  RLPG + A V KR+ALDQL FAP FL + LS+V++L+G++  I  KLRAD+ +   +NW  W+PAQ++NFRFV    QVL+AN +G  WN YLSY S+  V K + +   V+
Sbjct:   41 VWDAYASLLETHPLSTKIVTGGAIAGLGDVGCQL-----------------VLESE------DGDAK-----LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSEDIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSEVPKTLLNEKDVE 226          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.760e-49
Identity = 107/237 (45.15%), Postives = 134/237 (56.54%), Query Frame = 0
Query:   68 SIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASE-------------------IDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPG-TAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVDVT 284
            S+   Y++LL SRPL TK VT+  IA  GDV+CQL     A  EE Q    DV  H    P   GG  SV++                    +D  RT +F  + AAL AP+ H WY  L + + G TA    VKR+ALDQ LFAP F+ +F S +M+++G AAKI +KL+ DY  T+V NWG W+PAQ+INFR V   YQVL+AN VGFFWN  +S Q  K  L D E P  V  T
Sbjct:   23 SLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGE-NDVPPHH---PHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTET 255          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A225WCL6_9STRA (Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCL6_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.650e-48
Identity = 100/215 (46.51%), Postives = 125/215 (58.14%), Query Frame = 0
Query:   62 TKPTRAS-IFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDM 275
            TKPT A  ++  Y SLL + PL+TK  T GAIA  GDV CQLL LE  KR                               D  RT  FT +G  L++P LH WYGFL  R+ G A + V+KR+ALDQL FAP FL VFLS+V+ L+G+A  I  KLR D+ +   +NWG W+PAQ++NFRFV    QVL++N VG  WN YLSY S+  V K +
Sbjct:    6 TKPTTARRVWDSYASLLGTHPLSTKIATGGAIAGLGDVGCQLL-LEGDKR------------------------------FDGKRTAIFTILGGFLISPVLHVWYGFLGSRVSGVATSAVMKRLALDQLGFAPIFLPVFLSSVLTLEGHAYDIPDKLRVDWWSVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHSTVPKTL 189          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 167 bits (423), Expect = 1.690e-47
Identity = 92/203 (45.32%), Postives = 122/203 (60.10%), Query Frame = 0
Query:   63 KPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSY 265
            +P  +S++  YN LLE+ PL TK +T+GAIA   DV+CQ+            S   D D +           +S+   +DW RT  FT V   L  P  H WYGFL  ++ GT     +KRV LDQ+LFAP  LA F S V+L++G + +I  KLR D  TT+++N+  WIPAQ+INF+FV   Y+VL+AN VGFFWNIYLSY
Sbjct:   25 RPDTSSLWQQYNKLLETHPLMTKCITAGAIAAVADVTCQV------------SFPSDEDAN-----------KSLLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSY 204          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: D0MT87_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT87_PHYIT)

HSP 1 Score: 167 bits (422), Expect = 3.200e-47
Identity = 98/205 (47.80%), Postives = 124/205 (60.49%), Query Frame = 0
Query:   69 IFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLK 273
            I+  Y SLLE+ PL TK VT GAIA  GDV CQL                 V E E      DG A+     +D  RT+ FTF+G  L++P LH WYGFL  RLPG + + V KR+ALDQL FAP FL + LS+V+ L+G+A  I  KLRAD+   + +NW  W+PAQ++NFRFV    QV+++N VG  WN YLSY S+  V K
Sbjct:   41 IWDTYASLLETHPLKTKIVTGGAIAGLGDVGCQL-----------------VLEGE------DGDAK-----LDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGHAEDIPDKLRADWWPLMKANWVVWVPAQILNFRFVPGSMQVIFSNVVGLLWNSYLSYVSHSQVPK 217          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Match: A0A329SFZ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFZ2_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.900e-47
Identity = 99/205 (48.29%), Postives = 119/205 (58.05%), Query Frame = 0
Query:   69 IFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFTFVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLK 273
             +  Y SLLE+ PL TK VT GAIA  GDV CQL+ LEV                       D  AR      D  RT  FTF+G  L++P LH WYGFL  RLPG +   V KR+ALDQL FAP FL V LS+V+ L+G+A  I  KLRAD+     +NW  W+PAQ++NFRFV    QVL++N VG  WN YLSY S+  V K
Sbjct:   34 FWDAYASLLETHPLRTKIVTGGAIAGLGDVGCQLV-LEVE----------------------DDDAR-----FDVKRTAIFTFLGGFLISPVLHVWYGFLGSRLPGVSTTAVAKRLALDQLGFAPTFLPVILSSVLALEGHAEDIPNKLRADWWPLTKANWVVWVPAQILNFRFVPGSMQVLFSNVVGLLWNAYLSYVSHSEVPK 210          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1047.340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL95_9PHAE2.310e-18995.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH2_ECTSI5.150e-14496.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A3NKH9_9STRA3.580e-5047.06Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A835YNC4_9STRA1.270e-4948.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W2Q4U2_PHYPN6.590e-4946.26Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A835YKC9_9STRA9.760e-4945.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A225WCL6_9STRA5.650e-4846.51Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID... [more]
A0A4Q2YFM0_9BACT1.690e-4745.32Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
D0MT87_PHYIT3.200e-4747.80Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A329SFZ2_9STRA4.900e-4748.29Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 208..264
e-value: 6.4E-21
score: 74.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 64..271
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 64..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..288
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..208
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1047contigE-siliculosus-1a_F_contig1047:26010..31470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1047.340.1mRNA_E-siliculosus-1a_F_contig1047.340.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1047 24941..31504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1047.340.1 ID=prot_E-siliculosus-1a_F_contig1047.340.1|Name=mRNA_E-siliculosus-1a_F_contig1047.340.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=289bp
MPVASAVRKVAVVGHAQLLGARHRATTTSALPRRQCCGGSGTRSASTKAP
AQPPPTGAPKPTKPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSC
QLLALEVAKREEEQSSAQDVDEHEHQEPFGDGGARSVASEIDWGRTLRFT
FVGAALVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFL
STVMLLDGNAAKIDRKLRADYTTTVVSNWGYWIPAQVINFRFVAPVYQVL
YANFVGFFWNIYLSYQSNKAVLKDMEHPAGVDVTSSHK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22