Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 306 |
| Model size | 429 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927501.7354531-CDS-E-siliculosus-1a_F_contig10:139985..140291 | 1622927501.7354531-CDS-E-siliculosus-1a_F_contig10:139985..140291 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10 139986..140291 + |
| 1696318553.7561717-CDS-E-siliculosus-1a_F_contig10:139985..140291 | 1696318553.7561717-CDS-E-siliculosus-1a_F_contig10:139985..140291 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig10 139986..140291 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10.49.1 >prot_E-siliculosus-1a_F_contig10.49.1 ID=prot_E-siliculosus-1a_F_contig10.49.1|Name=mRNA_E-siliculosus-1a_F_contig10.49.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=102bp
MCSVLETCTEKTLLRVTFWSCSHTVHAHQRMSCIPPFNFPTGRSLAGWAY
DGLIRARQGVEFACEVFFCPEGFIRSGQGVGRSYELAPGDSAILAVECQF
Q* back to topmRNA from alignment at E-siliculosus-1a_F_contig10:139929..140357+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig10.49.1 ID=mRNA_E-siliculosus-1a_F_contig10.49.1|Name=mRNA_E-siliculosus-1a_F_contig10.49.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=429bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:139929..140357+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGCGGGCAAAGGGTTGAAAGAGTCGGTCAGTGTACTTGTCGTTCTCCGT
GAAAACGATGTGCTCCGTACTCGAGACATGCACTGAGAAAACGCTGTTGC
GTGTTACTTTTTGGAGTTGTTCGCACACGGTGCATGCCCATCAACGAATG
TCTTGTATACCCCCTTTCAATTTCCCTACTGGGCGCTCTCTTGCGGGGTG
GGCATATGACGGATTGATTAGGGCTCGTCAGGGCGTAGAGTTTGCATGTG
AAGTTTTTTTCTGCCCGGAGGGTTTTATTCGTAGTGGCCAAGGTGTCGGG
AGGTCTTATGAGCTAGCGCCCGGTGATAGCGCAATTCTGGCTGTCGAGTG
CCAATTTCAATGATTTAAATGTAGTTGTTGACGTACGTACATGAAGTCCT
TGTTCAACGCTAGGTGCTCGAATTGGAAT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10:139929..140357+ >mRNA_E-siliculosus-1a_F_contig10.49.1 ID=mRNA_E-siliculosus-1a_F_contig10.49.1|Name=mRNA_E-siliculosus-1a_F_contig10.49.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:139929..140357+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTGCTCCGTACTCGAGACATGCACTGAGAAAACGCTGTTGCGTGTTAC
TTTTTGGAGTTGTTCGCACACGGTGCATGCCCATCAACGAATGTCTTGTA
TACCCCCTTTCAATTTCCCTACTGGGCGCTCTCTTGCGGGGTGGGCATAT
GACGGATTGATTAGGGCTCGTCAGGGCGTAGAGTTTGCATGTGAAGTTTT
TTTCTGCCCGGAGGGTTTTATTCGTAGTGGCCAAGGTGTCGGGAGGTCTT
ATGAGCTAGCGCCCGGTGATAGCGCAATTCTGGCTGTCGAGTGCCAATTT
CAATGAATGTGCTCCGTACTCGAGACATGCACTGAGAAAACGCTGTTGCG
TGTTACTTTTTGGAGTTGTTCGCACACGGTGCATGCCCATCAACGAATGT
CTTGTATACCCCCTTTCAATTTCCCTACTGGGCGCTCTCTTGCGGGGTGG
GCATATGACGGATTGATTAGGGCTCGTCAGGGCGTAGAGTTTGCATGTGA
AGTTTTTTTCTGCCCGGAGGGTTTTATTCGTAGTGGCCAAGGTGTCGGGA
GGTCTTATGAGCTAGCGCCCGGTGATAGCGCAATTCTGGCTGTCGAGTGC
CAATTTCAATGA back to top
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