prot_E-siliculosus-1a_M_contig75.15624.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig75.15624.1
Unique Nameprot_E-siliculosus-1a_M_contig75.15624.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length185
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..83
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 61..80
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 84..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig75contigE-siliculosus-1a_M_contig75:261506..266085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig75.15624.1mRNA_E-siliculosus-1a_M_contig75.15624.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig75 260366..266125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig75.15624.1 ID=prot_E-siliculosus-1a_M_contig75.15624.1|Name=mRNA_E-siliculosus-1a_M_contig75.15624.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=185bp
MEKNAPATHVPVQQPTTVIVPPHHVGGGGGGGSGGGGSGGGGCCSVPSTA
SREVKNTRRAAIAIIVIHVIAVLLSGLFQIPGSLVGIIVGGAVLCNFSRC
AYKAAFVLFIVGLLLDLCSLGVLTWFIATSEGEIGEGVELSTGVKIAFIL
PVVLGVLSFLLGAVFARKAIQNWQRSGAPDVLPL*
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