mRNA_E-siliculosus-1a_F_contig1047.337.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1047.337.1
Unique NamemRNA_E-siliculosus-1a_F_contig1047.337.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A6H5JJG5_9PHAE (DMT protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJG5_9PHAE)

HSP 1 Score: 838 bits (2164), Expect = 1.380e-300
Identity = 474/504 (94.05%), Postives = 479/504 (95.04%), Query Frame = 2
Query:   50 MDLWRALAMAVLVASRCSVSLQFGFAHQPLRSSSSRLMKKPQAGQADRLWARRRAGPSVRLSTAETGVPETAVSCDTSLKPNIDADGAGKDVATLPASKGKNIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAV-----GGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLFXXXXXXXXXXXXXXXXXXXXXXATASAPTAAGQGDEEAAGKIA 1546
            M LWRALAMAVL+ASRCSVSLQFGFAHQPLRSSSS  MKK QAGQADRLW RRRAGPSVRLSTAETGVPET VSCDTSLKP+IDA+GAGKDVATLPASKGK IRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVA LNTARRHRTATA      G R  VEEEAELPPKEKAL NRYAARAGAELGLWLFLAGTV    WGLELTSASRAGFLVQLTTVIVPVLEAF+GRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSEL LSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAA+LLKESFRGVEAAGAGLLLLSLFXXXXXXXXXXXXXXXXXXXX  ATASAPTAAGQGDEEAAGKIA
Sbjct:    1 MYLWRALAMAVLLASRCSVSLQFGFAHQPLRSSSSHHMKKQQAGQADRLWTRRRAGPSVRLSTAETGVPETVVSCDTSLKPDIDANGAGKDVATLPASKGKIIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVASLNTARRHRTATAGECGRWGKRRGVEEEAELPPKEKALRNRYAARAGAELGLWLFLAGTV----WGLELTSASRAGFLVQLTTVIVPVLEAFVGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELALSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAMLLKESFRGVEAAGAGLLLLSLFXXXXXXXXXXXXXXXXXXXXDEATASAPTAAGQGDEEAAGKIA 500          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A8J2ST49_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST49_9STRA)

HSP 1 Score: 193 bits (490), Expect = 6.470e-52
Identity = 136/349 (38.97%), Postives = 181/349 (51.86%), Query Frame = 2
Query:  383 VLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAG----FLGGQADNFARFLGALA-SKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSL 1414
            VL +VP+ WGTYAP+VK +Y +   PPG++F+ A YVV++    AVA                           P+     N    RAG ELGL+LFL    Q  V GLE  SA  A FLVQ TTVIVPVLEA +  + +    +  CA+A +GVA++   G+                 T  AP+            GDLL+ C+AL YS+HVVRL      LD L LARAKA +E+G + LS+        FL G+A     F  +LA + PD     +  V+W GA+T AY +WAQ+ GQ  V  + ANLVY+ QP++S LFA  LL E       AG GL+L+++
Sbjct:   44 VLLSVPVAWGTYAPAVKAVYALPAPPPGVVFSLAYYVVALACLGAVAA--------------------------PRRSQ--NPLPYRAGGELGLYLFLGNLFQ--VVGLETVSADAAAFLVQTTTVIVPVLEARVTGKAVAGATYRNCAVAFLGVAVLCGEGL----------------ETGAAPAA-----------GDLLILCAALLYSVHVVRLSALAPGLDALDLARAKAAAEVGFAVLSVAALAAATPFLDGRA-----FAASLAHAAPDTTAALATAVVWCGAVTCAYTIWAQSFGQRGVTAARANLVYTSQPVFSALFAFGLLHEVPTAATLAGGGLILIAV 330          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: K0RU20_THAOC (EamA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU20_THAOC)

HSP 1 Score: 192 bits (488), Expect = 2.620e-50
Identity = 135/367 (36.78%), Postives = 197/367 (53.68%), Query Frame = 2
Query:  374 GLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAF-LGRRKLKP-QVWLACALATVGVALVSL--GGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLG---------------ALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLF 1417
            G+LVL TVPL WGTY P+VKY+Y+M  + PG +F+   Y+V+ +T   ++ L     +     V    E EE  ++             R G ELG +LF+   +Q  V GL+   A RA FLVQLTTV+VP++ A  +G     P Q WLAC +A VGV+++ +  GG+   GA     ISG    T L  S            GDLL+  +A  Y+LHVVRLGV+  +   L+LA AKA +E  LS   +++   +G  A    +F+                A +  P LL + +  ++W G +T AY ++AQ+ GQ+ V+P+E+NL+Y+ QPL+S LFA  LL E+       GA L+ L+L+
Sbjct:  122 GILVLLTVPLAWGTYTPAVKYMYEMEPAIPGFVFSAGYYLVAAVTLRLLSSLQANESNELK--VDRAEESEEGLDI-------------RGGWELGSYLFVGNALQ--VVGLQTVPADRAAFLVQLTTVLVPLVAALSVGALSAVPAQTWLACVVAFVGVSVMGIDDGGV---GAG----ISGGNPITLLHVS-----------PGDLLIVLAAFSYTLHVVRLGVYAPRTKPLALASAKATTEAFLSVAVVIILTIIGNNALEVPQFMQETGQGVINYFDALKTAASDNPRLLEISACAILWTGWVTCAYTIYAQSYGQSKVSPTESNLIYTTQPLFSSLFAYFLLGETLGAAGYVGATLICLALW 453          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A0G4H494_9ALVE (EamA domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H494_9ALVE)

HSP 1 Score: 181 bits (458), Expect = 3.240e-46
Identity = 137/380 (36.05%), Postives = 194/380 (51.05%), Query Frame = 2
Query:  341 SKGKNIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAV--------AGLNTARRHRT---ATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSAL--------------SLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLL 1405
            S+ K + S  S LL L++V L+WGTY P +K LY +   PP +  NF+ Y+ S+    A         A + T +   +   ++A G   EVE+  E      +LL      AGAELGLWL+L    Q  ++GL+ T ASRA F VQ TTV+VP+L +  G  +++  +W++ ALA  GV  ++ G +      LF     SLS   L              +GDLLV  SALFYS HVVRLG     L  L LA  K   +L ++ L              SL +  FL    ++F   +G  +    +  VF  V ++NG ++  YA WAQ+ GQ  V+P+ ANL+YSLQP+W+ LFAA+LLKE        G   ++
Sbjct:   87 SETKELTSLGSALL-LSSVSLLWGTYTPIIKLLYNLPHPPPPMAVNFSAYLASIFLLLAARNLGSNGGADIETLQETSSDFHSSAKGREDEVEDSDE---SSVSLLP-----AGAELGLWLYLGSISQ--LFGLQNTPASRAAFEVQTTTVLVPLLASVTGGERVRGSLWVSVALAFAGVVTLAGGSV-----SLFPSEGQSLSLQNL-------------FKGDLLVILSALFYSSHVVRLGRVAPFLPALPLATTKIGVQLVIAGLVVAWTAYSEGESGGSLPLTLFLQDFVNSFGDSVGGNSFLNSVFFVFLIVSVYNGGVS-GYAAWAQSAGQKKVSPTAANLLYSLQPVWASLFAALLLKEQIETRTLTGGACII 436          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S2LKU0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKU0_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.020e-45
Identity = 131/382 (34.29%), Postives = 189/382 (49.48%), Query Frame = 2
Query:  344 KGKNIRSERSGLLVLATVPLVWGTYAPSVKYLYQ-MGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFL-GRRKLKP-QVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADN---------------------FARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLF 1417
            +  NI     G+LVL TVPL WGTY P VKY+Y+ M  S PG +F+   Y+V+ ++ + ++ L      +         ++EEE           N+   R G ELG +LF+   +Q  V GL+   A RA FLVQLTTVIVP+L AF  G     P Q W AC +A  GV ++                 G+   T L P    E   S   +GD L+  +A+ YS+HVVRLG +  +   + LA +KA +E  LS   +    F+GG A +                      A   G++ S    L V +A ++W G +T AY ++AQ+ GQ  V P+++NL+Y+ QPL+S LFA  LL E        GA L+ ++L+
Sbjct:   63 QSNNISQRSLGILVLLTVPLAWGTYTPVVKYMYEKMDPSMPGFVFSAGYYIVAAVSLSVLSQLQAKNDDQEIINTPNDLQIEEEN----------NKITTRGGWELGSYLFIGNGLQ--VVGLQTVPADRAAFLVQLTTVIVPLLSAFAAGNLSAIPLQTWAACIIAFSGVVIMGA-----------HDSGGAGDQTGLLPLNSLEFNVS---QGDALILLAAIAYSMHVVRLGEYAPRTTAIKLAASKATTEAFLSIALVATLFFVGGSAQSPLPEFVNKIGHEVVEYYNAISSAVMNGSVLSSGSSLGVSAAAILWTGWITCAYTIFAQSFGQGRVNPTDSNLIYTTQPLFSSLFAYFLLGEVLGVYGYIGAILIGMALW 418          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7R9TUG6_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TUG6_9VIRI)

HSP 1 Score: 172 bits (436), Expect = 2.160e-44
Identity = 128/345 (37.10%), Postives = 176/345 (51.01%), Query Frame = 2
Query:  380 LVLATVPLVWGTYAPS---VKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLL 1405
            LVL +VPL WGT+A     +  ++     PP         + +  + AA+  +  AR  RTA   GGR      A LP    AL   +  R GAELG WLF+  ++Q  ++ L LT+ASR  FLVQ TTVIVP+LEA L RR +  + W ACA+AT G+AL+S GG             G   A+ L P         G+  GD L   SA F+++HVVRL    +    L LA  KA ++  L+ L++V+AG   G  +      G   + P  +    A+V WNG + +AY +WAQ   Q +++   ANL YS QPL +   AA  L ES     AAG  L++
Sbjct:    9 LVLTSVPLAWGTWAVVNVLMLNVFVAAGVPPXXXXAINAGIQAA-SLAALTAVCAARAVRTA---GGRG-----ASLPAPS-ALPGAFTLRGGAELGAWLFMGSSLQ--LYALTLTTASRVAFLVQATTVIVPMLEAALCRRAVSGRTWFACAMATSGIALLSFGG-------------GGAPASALPP---------GHALGDALALTSAAFFAMHVVRLQGFAAACVPLELAWVKAATQAALT-LAVVLAGVAFGIFEVVPTLDGLAVAGPHTIAAVCALVAWNGVVPSAYTVWAQGFAQRAISAPRANLFYSAQPLAAAALAAAFLGESLGAHGAAGGALIV 318          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S3AAI5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAI5_9RHOD)

HSP 1 Score: 171 bits (433), Expect = 8.000e-44
Identity = 132/352 (37.50%), Postives = 186/352 (52.84%), Query Frame = 2
Query:  383 VLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGR---RKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKL-DTLSLARAKALSELGLSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESF------RGVEAAGAGLLLL 1408
            +LA+VP+ W TY  +V+ LY +   PP  L N   Y+ S+ TF        A   R A +         E+E  P+ +++++ Y A  G ELGL+LFL  T+Q     L+LT+AS+A F+VQ T+V+VP +EA LGR   +K+ P V     LA++G+ L S+      GA              L PS L       NL GD L   +A+FYSLHV+RLG   SKL DT  LARAK + +L +++   V A       D    +L  +      L   + +++W GA+TTAY  WAQTRGQ SV PS A+++YS QP+WS + A ++L E         GV    A LL +
Sbjct:   41 ILASVPVAWSTYNVAVRLLYSIDHPPPAPLINVGNYLTSLATF------QIALLVRFALSKFSGSWQASESESSPEYESMISYYYA--GFELGLYLFLGSTIQLEA--LKLTTASKAAFIVQTTSVLVPTIEAILGRFPFKKILPSV----VLASIGIILFSVDDPKSLGA--------------LDPSQL-------NL-GDSLALFAAVFYSLHVIRLGSLSSKLRDTFRLARAKTICQLCIAS---VYATLALTSTDGIGEYLDNVTFND--LQASALILVWLGAVTTAYPQWAQTRGQMSVPPSVASILYSTQPVWSSITAFVVLSEQLPLKDIIAGVAIISASLLAI 351          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S2HES8_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HES8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.040e-43
Identity = 132/375 (35.20%), Postives = 187/375 (49.87%), Query Frame = 2
Query:  353 NIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKL---KPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVVAGFLGGQADN--------------FARFLGALASKP---DLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGLLLLSLF 1417
            N+     G+LVL TVPL WGTYAP VKY+Y++    PG +F+   YVV+ LT   +A L T     T      R E  E  E    E+ +            GL+LFL   +Q  V GL+   A RA FLVQLTT++VP+++A L  + L     + W+AC LA  GV ++ L G    G D    +  SLS           S+ +    GDLL+  +A  Y+LHVVRLG +      + LA +KA +E  LS   ++   FL G  D               F     +L +       LL     ++W G +T AY ++AQ+ GQ  V+P++ANL+Y+ QPL+S LFA  +L E+       GAGL+  +L+
Sbjct:  106 NVNERALGILVLMTVPLSWGTYAPVVKYVYEINPPVPGFVFSAGYYVVASLTLLTLASLTTTNDDDT------RKEGVETMEEGGVEEGM--DLXXXXXXXXGLYLFLGNALQ--VIGLKTVPADRAAFLVQLTTIMVPLVQATLVEKNLWSISIKTWVACLLAFSGVVVMGLDGKEMSGGD---SVLSSLS-----------SIVNTFTSGDLLIVSAAFVYTLHVVRLGRYAPYTTPIRLAASKATTEAILSVGLVLALLFLTGSDDQASFVTQTSHEISTFFTSIQNSLTTNAIPITTLLPAVGAILWTGWITCAYTIYAQSFGQRRVSPTDANLIYTTQPLFSALFAWGILGETLGKEGYVGAGLIGAALW 456          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A1Z5KLH4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLH4_FISSO)

HSP 1 Score: 172 bits (436), Expect = 2.150e-43
Identity = 128/385 (33.25%), Postives = 191/385 (49.61%), Query Frame = 2
Query:  356 IRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNR---YAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSALSLVV---------------AGFL------GGQADNFARFL------GALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKES-----FRGVEAAGAGLLL 1405
            +  ++ G+ VLATVP+VWGTY P VK LY++    PG +F+ A + V+ ++   +                           P  E +L +       +AG ELG +LFL  ++Q  V GL+  ++ RAGFLVQLTT+IVP+++A L R  +  + W+AC LA  G++++   G      ++ K    S S         W S+  G    D L+  +A+ YSLHVVRLG   ++   L L   KAL+EL LS ++L++               AG L      G +   F   L      G L +    L V    V+W G ++TAY  +AQ+ GQ  V P++ANL+YSLQP+++ +FA  LL E+     F G    G  +LL
Sbjct:   80 VSEKQIGIFVLATVPVVWGTYVPVVKGLYEIDPPIPGFVFSTAYFAVAAVSAFGLLSFQ-----------------------PSNESSLSSDDGWVVLQAGLELGFYLFLGNSLQ--VLGLKTITSERAGFLVQLTTIIVPIVQAALLRSSVSSRTWIACVLALAGISIMGYDG------EILKTQMSSFS---------WPSLKDG----DFLILGAAVVYSLHVVRLGRWANETSPLKLVAFKALTELILSIIALLLLTSVAPSSTGGIVPEAGLLTFAQETGLEISTFFETLQERIVSGTLTTSSIRLAV--GAVLWTGLISTAYTTFAQSFGQRRVKPADANLIYSLQPIFTAIFAYFLLGETMGMYGFVGGSVIGGAVLL 418          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Match: A0A7S4GI16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GI16_9EUGL)

HSP 1 Score: 175 bits (443), Expect = 1.620e-42
Identity = 129/353 (36.54%), Postives = 178/353 (50.42%), Query Frame = 2
Query:  377 LLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAGAELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRKLKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLWESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELGLSAL---SLVVAGFLGGQ--ADNFARFLGALASKPDLLLVFSAVVIWNGALTTAYAMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFR-----GVEAAGAGLLL 1405
            L VL +VPLVWGTYAP+V+++Y +    PG+ F+   Y+V+ L  +AVA          A    G     E+A     E+    R     GAELG +LFL    Q  V GL+ T++ +A F+ QLTT+ VPVLEA L R  +   +W A  +A  GV +V+  G               ++A   A         +  L G LL+  + LFY+LH+VRLGV   K D + LA +KA  EL  S      L V+G   G+       + +  + S  DL  +  A   W GA+T  Y +WAQ+ GQA + P EANL+YS QP+WS  F A+LL E+       G    GA +LL
Sbjct:  377 LAVLFSVPLVWGTYAPAVRFIYTLPVKVPGIFFSSLYYLVATLFLSAVA----------AALRPGPGSAPEDA----AERQAAKRRTLLGGAELGGYLFLGSYAQ--VLGLQATTSGQAAFITQLTTISVPVLEALLNRTPVPRGLWAASFVALAGVLVVAADG---------------MAAVAAADP-------AATLPGFLLLGLATLFYTLHIVRLGVWAPKCDAIPLALSKAAWELLFSVALMGGLAVSGTDSGREIVTFLQQLMDGVLSLVDLQNLGLAAA-WTGAVTFGYTLWAQSFGQAGIRPVEANLIYSTQPIWSTFFGAVLLGETLGPAGVVGFVLIGAAMLL 690          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1047.337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJG5_9PHAE1.380e-30094.05DMT protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A8J2ST49_9STRA6.470e-5238.97Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K0RU20_THAOC2.620e-5036.78EamA domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A0G4H494_9ALVE3.240e-4636.05EamA domain-containing protein n=1 Tax=Chromera ve... [more]
A0A7S2LKU0_9STRA4.020e-4534.29Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7R9TUG6_9VIRI2.160e-4437.10Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S3AAI5_9RHOD8.000e-4437.50Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2HES8_9STRA2.040e-4335.20Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A1Z5KLH4_FISSO2.150e-4333.25Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S4GI16_9EUGL1.620e-4236.54Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1047contigE-siliculosus-1a_F_contig1047:5729..12808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1500
Model size2143
Exons9
Ec32 orthologEc-02_005650.1
Ec32 ortholog descriptionEamA domain
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.EG
EggNOG OGs2S6AJ@2759,COG0697@1
EggNOG free text desc.EamA-like transporter family
Seed eggNOG ortholog2880.D8LTH6
Seed ortholog evalue7.4e-251
Seed ortholog score872.8
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927548.4177897-UTR-E-siliculosus-1a_F_contig1047:5728..57771622927548.4177897-UTR-E-siliculosus-1a_F_contig1047:5728..5777Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1047 5729..5777 +
1696318579.9343464-UTR-E-siliculosus-1a_F_contig1047:5728..57771696318579.9343464-UTR-E-siliculosus-1a_F_contig1047:5728..5777Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1047 5729..5777 +
1622927548.563074-UTR-E-siliculosus-1a_F_contig1047:12214..128081622927548.563074-UTR-E-siliculosus-1a_F_contig1047:12214..12808Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1047 12215..12808 +
1696318580.0283186-UTR-E-siliculosus-1a_F_contig1047:12214..128081696318580.0283186-UTR-E-siliculosus-1a_F_contig1047:12214..12808Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1047 12215..12808 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927548.433134-CDS-E-siliculosus-1a_F_contig1047:5777..62911622927548.433134-CDS-E-siliculosus-1a_F_contig1047:5777..6291Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 5778..6291 +
1696318579.9453294-CDS-E-siliculosus-1a_F_contig1047:5777..62911696318579.9453294-CDS-E-siliculosus-1a_F_contig1047:5777..6291Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 5778..6291 +
1622927548.4493895-CDS-E-siliculosus-1a_F_contig1047:6890..70241622927548.4493895-CDS-E-siliculosus-1a_F_contig1047:6890..7024Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 6891..7024 +
1696318579.9574919-CDS-E-siliculosus-1a_F_contig1047:6890..70241696318579.9574919-CDS-E-siliculosus-1a_F_contig1047:6890..7024Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 6891..7024 +
1622927548.4649317-CDS-E-siliculosus-1a_F_contig1047:7442..75561622927548.4649317-CDS-E-siliculosus-1a_F_contig1047:7442..7556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 7443..7556 +
1696318579.9704432-CDS-E-siliculosus-1a_F_contig1047:7442..75561696318579.9704432-CDS-E-siliculosus-1a_F_contig1047:7442..7556Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 7443..7556 +
1622927548.4750109-CDS-E-siliculosus-1a_F_contig1047:8210..83071622927548.4750109-CDS-E-siliculosus-1a_F_contig1047:8210..8307Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 8211..8307 +
1696318579.97868-CDS-E-siliculosus-1a_F_contig1047:8210..83071696318579.97868-CDS-E-siliculosus-1a_F_contig1047:8210..8307Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 8211..8307 +
1622927548.485877-CDS-E-siliculosus-1a_F_contig1047:8976..91021622927548.485877-CDS-E-siliculosus-1a_F_contig1047:8976..9102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 8977..9102 +
1696318579.986082-CDS-E-siliculosus-1a_F_contig1047:8976..91021696318579.986082-CDS-E-siliculosus-1a_F_contig1047:8976..9102Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 8977..9102 +
1622927548.5001037-CDS-E-siliculosus-1a_F_contig1047:9664..97911622927548.5001037-CDS-E-siliculosus-1a_F_contig1047:9664..9791Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 9665..9791 +
1696318579.993834-CDS-E-siliculosus-1a_F_contig1047:9664..97911696318579.993834-CDS-E-siliculosus-1a_F_contig1047:9664..9791Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 9665..9791 +
1622927548.5143232-CDS-E-siliculosus-1a_F_contig1047:10535..106711622927548.5143232-CDS-E-siliculosus-1a_F_contig1047:10535..10671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 10536..10671 +
1696318580.0017087-CDS-E-siliculosus-1a_F_contig1047:10535..106711696318580.0017087-CDS-E-siliculosus-1a_F_contig1047:10535..10671Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 10536..10671 +
1622927548.531777-CDS-E-siliculosus-1a_F_contig1047:11432..114951622927548.531777-CDS-E-siliculosus-1a_F_contig1047:11432..11495Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 11433..11495 +
1696318580.0101225-CDS-E-siliculosus-1a_F_contig1047:11432..114951696318580.0101225-CDS-E-siliculosus-1a_F_contig1047:11432..11495Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 11433..11495 +
1622927548.5467937-CDS-E-siliculosus-1a_F_contig1047:12025..122141622927548.5467937-CDS-E-siliculosus-1a_F_contig1047:12025..12214Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 12026..12214 +
1696318580.0189855-CDS-E-siliculosus-1a_F_contig1047:12025..122141696318580.0189855-CDS-E-siliculosus-1a_F_contig1047:12025..12214Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1047 12026..12214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1047.337.1prot_E-siliculosus-1a_F_contig1047.337.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1047 5778..12214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1047.337.1

>prot_E-siliculosus-1a_F_contig1047.337.1 ID=prot_E-siliculosus-1a_F_contig1047.337.1|Name=mRNA_E-siliculosus-1a_F_contig1047.337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=500bp
MDLWRALAMAVLVASRCSVSLQFGFAHQPLRSSSSRLMKKPQAGQADRLW
ARRRAGPSVRLSTAETGVPETAVSCDTSLKPNIDADGAGKDVATLPASKG
KNIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVS
VLTFAAVAGLNTARRHRTATAVGGRHEVEEEAELPPKEKALLNRYAARAG
AELGLWLFLAGTVQARVWGLELTSASRAGFLVQLTTVIVPVLEAFLGRRK
LKPQVWLACALATVGVALVSLGGILPPGADLFKYISGSLSATRLAPSGLW
ESVTSGNLRGDLLVACSALFYSLHVVRLGVHVSKLDTLSLARAKALSELG
LSALSLVVAGFLGGQADNFARFLGALASKPDLLLVFSAVVIWNGALTTAY
AMWAQTRGQASVAPSEANLVYSLQPLWSVLFAAILLKESFRGVEAAGAGL
LLLSLFLVTTQTGGGGGGAPPTNHGGDEATASAPTAAGQGDEEAAGKIA*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1047:5729..12808+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1047.337.1 ID=mRNA_E-siliculosus-1a_F_contig1047.337.1|Name=mRNA_E-siliculosus-1a_F_contig1047.337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7080bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1047:5729..12808+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCGACACCAAACAACCAGGGCGTGGCGGTGTGCTTGCGTGCGTGCTGCA TGGATTTATGGCGTGCTCTGGCTATGGCCGTATTGGTAGCCTCTAGATGC AGCGTCTCCTTGCAGTTTGGCTTCGCACATCAGCCTCTCCGAAGCAGCAG CAGTCGCCTCATGAAGAAACCGCAGGCCGGGCAAGCCGACAGGCTTTGGG CCAGGCGGCGCGCCGGCCCCTCCGTCCGCCTTAGCACGGCAGAAACTGGT GTGCCAGAGACAGCGGTGTCCTGCGATACCAGCCTCAAGCCAAACATCGA TGCGGATGGTGCTGGGAAGGATGTTGCGACGCTACCGGCTAGCAAAGGGA AGAACATCCGCTCGGAGCGGAGCGGCCTCCTCGTGCTCGCCACCGTGCCG TTGGTGTGGGGTACTTACGCTCCTAGCGTGAAGTACTTGTACCAGATGGG AGAATCGCCGCCGGGGCTGCTGTTCAACTTTGCGTGCTACGTGGTGTCCG TGCTGACGTTCGCGGCTGTCGCCGGTCTCAACACCGCCAGAAGACATCGG ACAGCAACAGCAGGTGAGTGGTCACGACCTCGGATAATATCTGCACGTGT CCTATGATACGGCAGATTACCCACGCTGCACAGCAGGATCTATCTGTGGG CACTACCTTCCCTCTCCGTGCTGCCGTTGTTGACCGTTGCACCCCGTGCA CGTAGTAGTATGTCGTTCTTCGCATGTGTGACGGGTACCAACGTTGCTTT GCTTGAAGCACACTGGTTGCACAACACCCTCTCGGTAGCTGCACAACCTG AGGCTTGTTGGGATACGTTCGACTTATCTGCAGCAGTACATAATGCTGTT TAGAAACCAATAGATGTTCCTAAAGTGTCTTCAACAACTGCACCTACCTG TAGGACTAGCTGTTGTTTCGACGTACACTGCCATTTGTGGGTGGGTGATG TGCGCCGAAGACTTGACGGATGAACACATCCTTACACTTCTGCCCTGCCA ACCCGCTCCTGCCGTTTTGAACAACACCTACAACACTATTTCGCCCTTTT CCAATAGATTTGCCCGTTATACTGTCCCGGTGACTAACCCTGTCGCACCA CTGTCATCCTCCTTCCTCGCATGATGCTAACTCTCTGAAACTGCTGCTCC TGCCCACGAAAGTGGGGGGGAGACACGAGGTCGAGGAAGAGGCAGAACTT CCTCCAAAAGAGAAAGCACTACTAAACCGCTACGCCGCACGAGCGGGAGC TGAACTAGGACTGTGGCTTTTTCTTGCTGGCACCGTGCAGGCAAGAGTCG TCAAGGGCAGTGTAGGAGAGCCTTGTCTAGATAGCGATACGGTCTTAGGC TAGCTCGGCTCAGACTATGTTACAAGTACAAGGATTGCCTGAGGAAAGTG CATGTTTCGGGGGCTGCACGCAGCACCTCAGACGACTAGCACGGTCGTGC AACACACATCTCTCAGACGTTGCCGCGCTCAGGCTAGGAACGTGGCATTC AACACACGTCCCTGAGGCACCTATTCTCCTGTTGAAAGGCGTGGTTTATC GCGCGGCGTTTTATCACCGTTATCGGCGACCTTGCTCTGGAAATGGGAAA TCCCTACGATCAAGTACCGCGGTCCCCGGAGTGTCGGCTACAGATCATGA ACGTGTGCTTTTTATATCTTCGTGTGGGTTGTTGGCTCTGCGCTGAATGC GCTCACACCGCCAGGTGTGGGGATTGGAGTTGACCTCGGCAAGCAGGGCA GGGTTCCTGGTGCAGCTTACGACGGTCATCGTGCCGGTTTTGGAAGCGTT TTTGGGGCGGCGAAAGCTCAAGCCACAGGTGAACGCATGCCCGCCCGAAG CAGGGAGGACTCGCGCCGATTGCAGGAGTACGGTACACCACTCGCGTGCT TTTGGCATTTTTTCTATTTTGTATCGGAACAGTAGGAGTGGTTGCTGTGA TAGATTTCGTTTTGCTTTGATTGGGTGCGGTTTGATCGTCAATTCGTACT CGACGCACAAATCGAAGGCAAGATGTCCACAACAGCAACCTTAACAGCGG TGTCTGGACAGCACCAATTTTGCAGTTCAGCCGGCATCCATGGTACCCCA CAAGTCTCGAAGGATAGGCCTAAGTCGACACCTCTCGCGTACGTGACGTC GACCTAATGATGCACTTAGGGTTCGCCAGGCCACGGATCGCGCGGTATCG ATGGTATCTAGCTCAACGTTAGCACGGAAATGTTTGCTTGTGTAGTCTGT GAGGAGAGTGGTGAGAGGTCATTTCGATGTGTGCGTCCATGTGTGCGTTC TTCTCGCCCGCATGCCTAAAATAAGTAAAGATCAACGACGCCACCGAAGA ACATGTACTGTAAGCTGATCACAGCCCCAATAAAAATATATGTTAATAGC AACGATTGACTGTACGTATCTTGATTGAAATTTATCTGATTGACTGTACA TACCTTGATTGAAATTTATCTGGGGGTGGCAGGTGTGGTTGGCGTGCGCG CTTGCCACGGTGGGAGTTGCGCTAGTGAGTCTTGGAGGCATCCTTCCTCC GGGAGCTGATCTTTTCAAGTACATTTCCGGTGAGCCCAGGCTAGTGAGAT AGTTTATCCCGAGCACAGTGAATACCAAGAGTTCTCTGAATTTCAGACCA TGCTATAGTAGCGTCGCAGCTTGTGTCGTGAAAAATGTAACGTTTTCGAA GGTTATACGGCTTCGTTTCGTAGGTGTGAAGCAGACCAATCCACCTAAAC TACAAGTATGTAAATATACCGTGTGGTACTTAGAATAACATCAGGCCTAC TTGCTGTGGGTAAACTCTAGGCAAGCACCTACCCGTAGCCTGAGTACCTT CAGTGTGGAGACAGCTCTCCTGGTTTCTACTGCCACCACAGCGTTGCGCC TCTCGAGAGTGTGAAGTTCACGTCGAGTGTATGTGTTGTCCTAAAAGCAT CTGCCTTTCCATCAAACCGTGCTCCTTCGCCTACTAGTTATTTTTTTGCG CCGCACAACATGGTTGCACCGCCCATTTAAAACTTCAAATGTACCTTCCG TTGTCCCGTCGTTTTATGGGCGCTCTTCCGGCCACGATCAGCACAGCCCC CGTCCCCGCCAATGGTCCGGCACTCTCTGGCCCGACACTCGCAATGCCGC GGTTTCTGTGTTTCCTACTTGATATTGTAAGAGATCAATCATCTCTGATC TCGGCCATCCGTGCCTCCCATCTCTGCGTCTTACGGCCGCCCATCCAGGT TCTCTTTCAGCCACTCGGCTAGCCCCGTCGGGGCTGTGGGAAAGCGTCAC GAGCGGAAACCTTCGGGGAGACTTGCTAGTGGCCTGTTCTGCCCTATTTT ACTCCCTCCATGTCGTGCGATTAGGTGCGAGCTAAAGGGGTCAATTGACC TTACGGTGTATTTTTCTTTCTTGATGATTACAGGTCATGGGCCGTTCTCC ATCACAAGTTGTAATACTTTACGGGCAGGCGTGACCACGTTGGTTTGTGC AGTGAATTCGATTGCTTTTCTGTGGTGTGGCGTCCTCTTTTGGTCATCCC AACTTGTTCTTCTTGTGTCGTTGGGAAAGGCGAGAGGCAGTGCGGTCCGT GTGCTCTGTTCTGTGCTCCCTATACGCTGTGCGACCGGCTGAGGTTGTGG GTGCTTTCTCGATGATAGGTCGACTCACGAATCACAGGCTGCTCACATCA GTACTACACCCTACACCAAAAACGTGCTTGATTTTGAACTAAAGCTTTCG TCCACGTTGAAGCTCAAGACGTCGCTTGGTGGAATCGAACATTGCTAAAT ATCAAAGAATCTATCCTGCGCAACCGCGGCAGTCCAAGCCTCCGATCACG GTTTCATCTGTTCGAGCCAACCTCAGATAGGAGTTGTTGTATTCCTCAGG AATCCGATGCCCATCTCTATGCTTGTCTCCAAGCAGGGGTACACGTGTCT AAGCTGGACACGCTGTCTCTCGCAAGGGCGAAGGCGCTCTCGGAGCTTGG GCTCTCCGCACTGTCGCTGGTGGTGGCGGGGTTCTTGGGGGGGCAAGCGG ACAACTTCGCGAGGTGGGTTGGGAGCAAGACCGGCGGGGGGGTAGGTGTG CGCTCTTTGTCGTTGGTGGCCGCAGGAATTCGGTCGTTGGGCACGCATCC CTCTCAAGACGGTAAGCTGGAGACCTCATGCGGTCGCTTGTAAGGTGCTT TGTTATTTGTGTTGTTGTCTTCGCACATTGAGAACCGTTCTGATACCTGC TCAGTGCCTTCTATCATCCGTACGGGTCCAGTTGACGCGGACTCCTTCCG TGGTCACAGGCTATCTACCCAGAGAGGGTGCACACTGCTAATGAATTCAT CTTAGATGCGATAGTAGCATGATAAAATCAGAAAGAGTAGTCCCCTGACT CCAGACGTCGCAGGCGACTCCGGCTTGATCGCCTTGGGATATTGTGCAGA TTGACCATGAACATGGTCGCAATTTCTTAACAATATCCGCGGAGCCACCA TCCGCGAAGAGGCTGCATGCTGGTGTCAAGGCTAGATCAATTCCCCGCTA CATCGTGGTGTGGTCGCGTTGGTGATCGTGCTGGGGTGTTTATCTACTGC TACGCACCCGCCCATTTGCGAACACGTAGAGCCGGCACTTGCTACGTACT TGTGTTCCCACCAACTCAAATTTGAAGCCAGTCTACCAGCATGGACACGA ACTCTTCCTGTCTCCAGCTCTACCGCTGAGTCCTGATCTCCTTCTCCACC CATTGTTCTTCGCCGCATCATCTACAAACAATAACGTTTGTCCGATTTTT TTATTAGGTTTCTTGGTGCCCTGGCCTCAAAGCCTGACCTGCTGCTGGTA TTCTCCGCGGTGGTGATCTGGAACGGGGCCCTAACAACTGCGTACGCCAT GTGGGCGCAAACCCGGGGACAGGCGTCGGTGGCCCCTAGTGAGGTGCGGG TTGTTCTTGCTTCTCGAACAGGGTGGACTGGTTTCCAGGCCGCTTTGCAT CTACTTCTGGTTTCAGGCCGCTTGGCATCAACTTATTCTGGGCCGCCAGA GTTACAGACACCGTTTAACTCTGCTCTCGAAGTGGTGTGTCCGCCCACAC AGTCTCTCATCAGACGCTAGTTCCGCTACTGTCTGCCACTCTTTGATCGT TCCAAGTAGTGTGTCCTCTTGCTCTCGTTCCGCGTGTTTTTTACATGCAG GTGTGACGCAGGGTGTGGTGTAGGGCGACCACTTCTTGGGTACCGAATAG CACGAGGGTAGATGCAGCGCCCCACAGATTTACATACAACCGTGGAACAA TCGGTAGCTCAGGAACAGCGAGGAAGTTGGTTTTGTGAGCCGAAGAACTT ACGTGTGTGACGCGAACTGACAGGGAAGCTTTTGCTGTTTTTCACGAGAC AGTCTTGAGAACATCTCAATCCACTGGCACATACAACAACAGCTGTAGAC GATCCACAGCTGGAAAACGCGCAGAATCCGGTAACGTTCCTCGAATGGAC CGATTCGAGCCCCCATGTTCGACAGCGACGCTTGAAACTCTTCCATCCAA GAGGAGTGGAGAGAGGCGGGTGTCGCTCAACACTTCCCAACCCACGCCTG CCTCTTTGAGACACTCTAATAGACTGAACGTCTGATACTGCTGCCCGTGA TTCGGATTTCTCCCTACGGGTTGGTTGTGTTCGTCGTTGACAACGTCACG GCAGGCGAATTTGGTCTACTCGCTGCAGCCGCTCTGGTCCGTCCTGTTTG CGGCAATACTCCTCAAGGTGTGGGACGAGTGTCATTTGACGACCACATAT ATGTTTGCACACAACATTGTTTTAACTCGATTTTTTTTTTTTGCGTGTGA CAATGTCATATTGCCTGTCTGTGTACCCCCCCAAGCTGGACAAAGAGTTA CAGCAGTCCTCTGCACTTGCTTTTTTTGTAGACAAGGAAAACAAGGCATG AGGGTATCCTCTCTTCGGTTCCGAGTTCGAAACAAATCCACCTCCATTGT GTGGGATGGCAGCAGCATTATGGGGGGGTGAAATGGCAATGTAATTCATG CTGTGCTGTGGCCCACTTCCGGGGCGTTTTTTTAGAAAAGTCACACCAAA ACACAGGAATACTAGTACCCTTTCGAGATATAACCACAGGCGAAAGGGAT GTGCCGAAGTCTCTTCAGTGAGTGGAGGGAAACCGGCTGGAAAACTTGGC ATATTCTGAGTCTGTTTTAAGCCCCCGTATCCTCGCGCAAGAGTACTGCT GTACTTCTGATTCGTTTGAATGTGCATGTACCCGTCTCTTCCCGCAGGAG TCTTTTAGGGGCGTAGAGGCGGCGGGCGCCGGACTGTTGCTCTTGTCGCT GTTTCTCGTTACGACCCAAACCGGCGGCGGTGGCGGCGGCGCTCCTCCGA CCAACCACGGCGGCGATGAGGCAACAGCATCAGCACCAACAGCGGCAGGC CAAGGCGATGAAGAGGCTGCAGGAAAGATTGCATGAGACAGCAGGACCCT TTTGCATTTCATGGTTAGGGAGTTGGTTTGGTGACGGCACGTGAATGGTT TCCATGTGTGTTTCCCGTTACCCGCTCTCTGTTCTTTTGGTGTCGGCGTA AGTTTTCGTTCATGGAACAACATTTTTGAGAGTTTTGTTCCTCTCGAGAC AGAGAGAAAACCTTTCAAGAACAGGCCGTAAATAAAGACTTCAGCACGAG TCGCCGCCCTCATGTTCCTTCAAGGACGACAACAAGAGTCGGCCACTCTT TGGTGTGGCTTGGACACAGATGTACGTAAAACTGCAAAAGCATCGGCTTG GATCCCAGGCTGTTTCGTTGGGAGAGATGCCGCAAGAACATCACTCGATG ACCTCATCACCTCATCACCGAGGGCACCATTAGTCTAGATGTTCAAGAAA CGGACAAAGCGGTGAGGAATACTAGACGGCACGCCATGGTGCCAATACTA ATATTTGCCCTTGGAGGTGCGCGACTGCTCTACCTACCCTTCAGTTTTTT TGCGGATCGATTGGTGTGTGGGTCCCTGGGAACTGCCACTGCTGTCAAAC GCTTTCCATGATGTCGCAACGCTTGGAAAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1047:5729..12808+

>mRNA_E-siliculosus-1a_F_contig1047.337.1 ID=mRNA_E-siliculosus-1a_F_contig1047.337.1|Name=mRNA_E-siliculosus-1a_F_contig1047.337.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3000bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1047:5729..12808+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGATTTATGGCGTGCTCTGGCTATGGCCGTATTGGTAGCCTCTAGATG
CAGCGTCTCCTTGCAGTTTGGCTTCGCACATCAGCCTCTCCGAAGCAGCA
GCAGTCGCCTCATGAAGAAACCGCAGGCCGGGCAAGCCGACAGGCTTTGG
GCCAGGCGGCGCGCCGGCCCCTCCGTCCGCCTTAGCACGGCAGAAACTGG
TGTGCCAGAGACAGCGGTGTCCTGCGATACCAGCCTCAAGCCAAACATCG
ATGCGGATGGTGCTGGGAAGGATGTTGCGACGCTACCGGCTAGCAAAGGG
AAGAACATCCGCTCGGAGCGGAGCGGCCTCCTCGTGCTCGCCACCGTGCC
GTTGGTGTGGGGTACTTACGCTCCTAGCGTGAAGTACTTGTACCAGATGG
GAGAATCGCCGCCGGGGCTGCTGTTCAACTTTGCGTGCTACGTGGTGTCC
GTGCTGACGTTCGCGGCTGTCGCCGGTCTCAACACCGCCAGAAGACATCG
GACAGCAACAGCAGATGGATTTATGGCGTGCTCTGGCTATGGCCGTATTG
GTAGCCTCTAGATGCAGCGTCTCCTTGCAGTTTGGCTTCGCACATCAGCC
TCTCCGAAGCAGCAGCAGTCGCCTCATGAAGAAACCGCAGGCCGGGCAAG
CCGACAGGCTTTGGGCCAGGCGGCGCGCCGGCCCCTCCGTCCGCCTTAGC
ACGGCAGAAACTGGTGTGCCAGAGACAGCGGTGTCCTGCGATACCAGCCT
CAAGCCAAACATCGATGCGGATGGTGCTGGGAAGGATGTTGCGACGCTAC
CGGCTAGCAAAGGGAAGAACATCCGCTCGGAGCGGAGCGGCCTCCTCGTG
CTCGCCACCGTGCCGTTGGTGTGGGGTACTTACGCTCCTAGCGTGAAGTA
CTTGTACCAGATGGGAGAATCGCCGCCGGGGCTGCTGTTCAACTTTGCGT
GCTACGTGGTGTCCGTGCTGACGTTCGCGGCTGTCGCCGGTCTCAACACC
GCCAGAAGACATCGGACAGCAACAGCAGTGGGGGGGAGACACGAGGTCGA
GGAAGAGGCAGAACTTCCTCCAAAAGAGAAAGCACTACTAAACCGCTACG
CCGCACGAGCGGGAGCTGAACTAGGACTGTGGCTTTTTCTTGCTGGCACC
GTGCAGGCAAGATGGGGGGGAGACACGAGGTCGAGGAAGAGGCAGAACTT
CCTCCAAAAGAGAAAGCACTACTAAACCGCTACGCCGCACGAGCGGGAGC
TGAACTAGGACTGTGGCTTTTTCTTGCTGGCACCGTGCAGGCAAGAGTGT
GGGGATTGGAGTTGACCTCGGCAAGCAGGGCAGGGTTCCTGGTGCAGCTT
ACGACGGTCATCGTGCCGGTTTTGGAAGCGTTTTTGGGGCGGCGAAAGCT
CAAGCCACAGGTGTGGGGATTGGAGTTGACCTCGGCAAGCAGGGCAGGGT
TCCTGGTGCAGCTTACGACGGTCATCGTGCCGGTTTTGGAAGCGTTTTTG
GGGCGGCGAAAGCTCAAGCCACAGGTGTGGTTGGCGTGCGCGCTTGCCAC
GGTGGGAGTTGCGCTAGTGAGTCTTGGAGGCATCCTTCCTCCGGGAGCTG
ATCTTTTCAAGTACATTTCCGGTGTGGTTGGCGTGCGCGCTTGCCACGGT
GGGAGTTGCGCTAGTGAGTCTTGGAGGCATCCTTCCTCCGGGAGCTGATC
TTTTCAAGTACATTTCCGGTTCTCTTTCAGCCACTCGGCTAGCCCCGTCG
GGGCTGTGGGAAAGCGTCACGAGCGGAAACCTTCGGGGAGACTTGCTAGT
GGCCTGTTCTGCCCTATTTTACTCCCTCCATGTCGTGCGATTAGGTTCTC
TTTCAGCCACTCGGCTAGCCCCGTCGGGGCTGTGGGAAAGCGTCACGAGC
GGAAACCTTCGGGGAGACTTGCTAGTGGCCTGTTCTGCCCTATTTTACTC
CCTCCATGTCGTGCGATTAGGGGTACACGTGTCTAAGCTGGACACGCTGT
CTCTCGCAAGGGCGAAGGCGCTCTCGGAGCTTGGGCTCTCCGCACTGTCG
CTGGTGGTGGCGGGGTTCTTGGGGGGGCAAGCGGACAACTTCGCGAGGGG
TACACGTGTCTAAGCTGGACACGCTGTCTCTCGCAAGGGCGAAGGCGCTC
TCGGAGCTTGGGCTCTCCGCACTGTCGCTGGTGGTGGCGGGGTTCTTGGG
GGGGCAAGCGGACAACTTCGCGAGGTTTCTTGGTGCCCTGGCCTCAAAGC
CTGACCTGCTGCTGGTATTCTCCGCGGTGGTGATCTGGAACGGGGCCCTA
ACAACTGCGTACGCCATGTGGGCGCAAACCCGGGGACAGGCGTCGGTGGC
CCCTAGTGAGGTTTCTTGGTGCCCTGGCCTCAAAGCCTGACCTGCTGCTG
GTATTCTCCGCGGTGGTGATCTGGAACGGGGCCCTAACAACTGCGTACGC
CATGTGGGCGCAAACCCGGGGACAGGCGTCGGTGGCCCCTAGTGAGGCGA
ATTTGGTCTACTCGCTGCAGCCGCTCTGGTCCGTCCTGTTTGCGGCAATA
CTCCTCAAGGCGAATTTGGTCTACTCGCTGCAGCCGCTCTGGTCCGTCCT
GTTTGCGGCAATACTCCTCAAGGAGTCTTTTAGGGGCGTAGAGGCGGCGG
GCGCCGGACTGTTGCTCTTGTCGCTGTTTCTCGTTACGACCCAAACCGGC
GGCGGTGGCGGCGGCGCTCCTCCGACCAACCACGGCGGCGATGAGGCAAC
AGCATCAGCACCAACAGCGGCAGGCCAAGGCGATGAAGAGGCTGCAGGAA
AGATTGCATGAGAGTCTTTTAGGGGCGTAGAGGCGGCGGGCGCCGGACTG
TTGCTCTTGTCGCTGTTTCTCGTTACGACCCAAACCGGCGGCGGTGGCGG
CGGCGCTCCTCCGACCAACCACGGCGGCGATGAGGCAACAGCATCAGCAC
CAACAGCGGCAGGCCAAGGCGATGAAGAGGCTGCAGGAAAGATTGCATGA
back to top