prot_E-siliculosus-1a_M_contig74.15532.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig74.15532.1
Unique Nameprot_E-siliculosus-1a_M_contig74.15532.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length455
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: D7FLR0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR0_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.670e-50
Identity = 304/333 (91.29%), Postives = 308/333 (92.49%), Query Frame = 0 
Query:  123 NPWCWAGVECGVGDVQGLRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPELGKMVHLQYLRLAVSKLEGPIPDTLGEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXNLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXPELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHVVEGCPSYSLPLHRGFNRWLSLVMMSI-LTMLLRHQKPIILLWLPTGMF 454
            NPWCWAGVECGVGDVQGLRL+DNQLQGVLPGA+LTNMRGLVTLDLSGNEIGG LPPELGKMVHLQYLRLAVSKLEGPIP TLG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE XNLR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXPE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DLHVVEGCPSYSLPL RGF RWLSLV+  + LTM LRHQK  ILLWLPTGMF
Sbjct:    9 NPWCWAGVECGVGDVQGLRLSDNQLQGVLPGAALTNMRGLVTLDLSGNEIGGTLPPELGKMVHLQYLRLAVSKLEGPIPGTLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIXNLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHIEVAHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLHVVEGCPSYSLPLRRGFTRWLSLVLRCVNLTMQLRHQKTAILLWLPTGMF 341
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: D7FLQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ9_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.300e-26
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    1 MAASLLRRGSYNSRDIRFELEATIVVFEEEKAAMQKLGPKVEVSPATKRLWQELQQEKIAL 61
            MAASLLRRGSYNSRDIRFELEATIVVFEEEKAAMQKLGPKVEVSPATKRLWQELQQEK+++
Sbjct:   45 MAASLLRRGSYNSRDIRFELEATIVVFEEEKAAMQKLGPKVEVSPATKRLWQELQQEKVSV 105
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: A0A6H5K666_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K666_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.900e-20
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0 
Query:  159 MRGLVTLDLSGNEIGGALPPELGKMVHLQYLRLAVSKLEGPIPDTLGEI 207
            MRGLVTLDLSGNEIGG LPPELGKM++LQYLRLAVSKLEGPIPDTLGEI
Sbjct:    1 MRGLVTLDLSGNEIGGTLPPELGKMLNLQYLRLAVSKLEGPIPDTLGEI 49
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: A0A484DS87_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS87_BRELC)

HSP 1 Score: 67.8 bits (164), Expect = 1.190e-8
Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 0 
Query:   76 PHPVCDRDMKALEIFFEAMHGRRWLDLSGWLGRTATANTRGVPPFSCNPWCWAGVECGVGDVQGLRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPELGKMVHLQ 187
            P  +   ++KAL   ++A++G RW    GW   T             +P  W GVE  +G V  L L  N+L G LP  SL  +  L  LDLS N++ G++P ELGK+  L+
Sbjct:    5 PSAIPTSEVKALVDLYDALNGDRWRRRDGWKQPTR------------DPKHWFGVEVVMGHVVALELPTNELSGCLPSTSLARLPHLCVLDLSKNQLRGSIPAELGKLSALK 104
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: W2H4N1_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2H4N1_PHYPR)

HSP 1 Score: 63.5 bits (153), Expect = 2.950e-7
Identity = 39/101 (38.61%), Postives = 52/101 (51.49%), Query Frame = 0 
Query:   83 DMKALEIFFEAMHGRRWLDLSGWLGRTATANTRGVPPFSCNPWCWAGVECGVGDVQGLRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPELGKM 183
            ++ AL   ++A++G RW    GW   T             +P  W GVE  +G V  L L  NQL G LP ASLT +  L  LDLS N++ G +P ELG +
Sbjct:   12 EVAALVELYDALNGDRWRRRDGWKQPTR------------DPEQWFGVEVVMGHVVALELPANQLSGCLPAASLTRLPQLRVLDLSKNQLRGEIPAELGTL 100
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: A0A438JV57_VITVI (Receptor-like protein 12 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JV57_VITVI)

HSP 1 Score: 60.8 bits (146), Expect = 7.620e-7
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:  140 LRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPELGKMVHLQYLRLAVSKLEGPIPDTLG 205
            L +++N +QG +P     N+  LV+LD+SGN   G++PP+L  +  LQYL L  + L G IP+ +G
Sbjct:  112 LYISNNNIQGEIPAVGFANLSNLVSLDMSGNNFSGSIPPQLFHLPLLQYLNLDRNSLSGKIPEEIG 177
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: A0A3M6VBB7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBB7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.960e-6
Identity = 38/104 (36.54%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:   83 DMKALEIFFEAMHGRRWLDLSGWLGRTATANTRGVPPFSCNPWCWAGVECGVGDVQGLRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPELGKMVHL 186
            ++ AL   ++A++G RW    GW   T             +P  W GVE  +G V  L L  N L G LP ASLT +  L  LDLS N + G +P E+G +  L
Sbjct:   12 EVAALVELYDALNGDRWRRRDGWKQTTH------------DPEQWFGVEVSMGHVVALELRANDLSGCLPAASLTRLPQLRVLDLSKNRLQGDIPVEVGTLRSL 103
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: D0NG45_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NG45_PHYIT)

HSP 1 Score: 58.9 bits (141), Expect = 6.570e-6
Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0 
Query:   83 DMKALEIFFEAMHGRRWLDLSGWLGRTATANTRGVPPFSCNPWCWAGVECGVGDVQGLRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPELGKM 183
            ++ AL   ++A++G RW    GW   T             +P  W GV+  +G V  L L  N+L G LP ASL  +  L  LDLS N++ G +P ELG +
Sbjct:   12 EVTALVDLYDALNGDRWRRRDGWKQPTR------------DPEHWYGVKVVMGHVVALELPANELSGCLPAASLAQLPQLRVLDLSKNQLRGEIPAELGTL 100
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BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Match: G4YS16_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YS16_PHYSP)

HSP 1 Score: 57.8 bits (138), Expect = 2.160e-5
Identity = 36/98 (36.73%), Postives = 48/98 (48.98%), Query Frame = 0 
Query:   83 DMKALEIFFEAMHGRRWLDLSGWLGRTATANTRGVPPFSCNPWCWAGVECGVGDVQGLRLADNQLQGVLPGASLTNMRGLVTLDLSGNEIGGALPPEL 180
            ++ AL   ++A+ G RW    GW   T             +P  W GVE  +G V  L L  N+L G LP ASL  +  L  LDLS N++ G +P EL
Sbjct:   12 EVAALVELYDALGGDRWRRRDGWKQPTR------------DPEQWFGVEVAMGHVVALELPANELSGCLPAASLARLPQLRVLDLSKNQLRGEIPAEL 97
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig74.15532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FLR0_ECTSI1.670e-5091.29Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FLQ9_ECTSI1.300e-2695.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K666_9PHAE2.900e-2093.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A484DS87_BRELC1.190e-835.71Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W2H4N1_PHYPR2.950e-738.61Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A438JV57_VITVI7.620e-740.91Receptor-like protein 12 n=1 Tax=Vitis vinifera Ta... [more]
A0A3M6VBB7_9STRA2.960e-636.54Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
D0NG45_PHYIT6.570e-635.64Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
G4YS16_PHYSP2.160e-536.73Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 255..278
e-value: 41.0
score: 8.2
coord: 303..326
e-value: 15.0
score: 11.9
coord: 159..183
e-value: 23.0
score: 10.3
coord: 351..375
e-value: 11.0
score: 12.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 81..251
e-value: 9.2E-37
score: 128.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 257..437
e-value: 3.8E-44
score: 152.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 162..174
e-value: 0.48
score: 10.6
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 281..303
e-value: 0.93
score: 10.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 209..268
e-value: 7.0E-8
score: 32.1
coord: 306..364
e-value: 5.5E-9
score: 35.7
NoneNo IPR availablePANTHERPTHR46662:SF2coord: 282..408
coord: 138..295
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 232..359
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 282..408
coord: 138..295
NoneNo IPR availablePANTHERPTHR46662:SF2coord: 232..359
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 422..438
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..421
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 439..454
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 120..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig74contigE-siliculosus-1a_M_contig74:150970..157381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig74.15532.1mRNA_E-siliculosus-1a_M_contig74.15532.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig74 150970..157381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig74.15532.1 ID=prot_E-siliculosus-1a_M_contig74.15532.1|Name=mRNA_E-siliculosus-1a_M_contig74.15532.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=455bp
MAASLLRRGSYNSRDIRFELEATIVVFEEEKAAMQKLGPKVEVSPATKRL
WQELQQEKIALEGLYMHATGDEYSRPHPVCDRDMKALEIFFEAMHGRRWL
DLSGWLGRTATANTRGVPPFSCNPWCWAGVECGVGDVQGLRLADNQLQGV
LPGASLTNMRGLVTLDLSGNEIGGALPPELGKMVHLQYLRLAVSKLEGPI
PDTLGEIKGLRELDISHSRLSGPIPPSLGRCTKLSLLNLSHNRLRGSMPP
EIGNLRALRDLFLGHNRLTGRIPSSFADLVRLRSLSLSCNCLEGTLSPWL
GKLTCLHRLLLDHNQLTGRLPKAFQNLRHIEVAHFQHNCLSGTIPRCLGE
LTELRVLNLAGNRLQGKMPPELGDLAKLAGLEVGNNFIVGPLPSELGRLS
RLVDLHVVEGCPSYSLPLHRGFNRWLSLVMMSILTMLLRHQKPIILLWLP
TGMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR003591Leu-rich_rpt_typical-subtyp