prot_E-siliculosus-1a_M_contig73.15470.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15470.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15470.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length716
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig73.15470.1 vs. uniprot
Match: D7FRX1_ECTSI (SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX1_ECTSI)

HSP 1 Score: 814 bits (2102), Expect = 3.120e-288
Identity = 639/715 (89.37%), Postives = 640/715 (89.51%), Query Frame = 0
Query:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPSTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADGLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKKXXXXXXXXXXXXXXXXXASAGVEKDEERTRAPRPARKSLGDWRGKLAVGAAGLGIGSGGGGVSRGASTRGAGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDAREGAAVPSGGQQLQQLGALTPEDFNRKLGSASEGGRLLFKPPSARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTATVXXXXXXXXXXXXXXXXXXXXXXXXRPXXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMMGETHARRPSYESWGIPPEPTQKFEYGGAPTVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPPSRPXVAXXXXXVQEASQFGQXXXXXXXXXAMPSMGHAPXXXXXXXXXXGGGGASMRGDLLASITNGKKLKTVERPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDDG 715
            MPLTMRPIPHALNLGDPEIYGQGPSGQGTP TQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTAD LSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREK XXXXXXXXXXXXXXXXX  AGVEKDEER RAPRPARKSLGDWRGKLAVGAAGLGIGS   GVSRGASTRGAGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDA  GAAVPSGGQQLQQLGALTPEDFNRKLGSASEGGRLLFKPPSAR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXX XXXXX  XXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMM ETHARRPSYESWGIPPEP Q FE+GGAP VAPP XXXXXXX                      PP           VQEASQFGQ    XXXXX MPSMGHA XXXXXXXXXX  GGASMRGDLLASITNGKKLK VERPAP  XXXXXXXX  XXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDDG
Sbjct:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPGTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADDLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXAGVEKDEERARAPRPARKSLGDWRGKLAVGAAGLGIGSXXXGVSRGASTRGAGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDA--GAAVPSGGQQLQQLGALTPEDFNRKLGSASEGGRLLFKPPSARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXX-XXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMMEETHARRPSYESWGIPPEPAQNFEHGGAPAVAPPAXXXXXXXAQL-------------------PP-----------VQEASQFGQPPLPXXXXXXMPSMGHAXXXXXXXXXXXXSGGASMRGDLLASITNGKKLKKVERPAPVAXXXXXXXXNEXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDDG 682          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15470.1 vs. uniprot
Match: A0A7S1XLA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLA9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.710e-20
Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 0
Query:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPSTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADGLSKKISAASTRCSNLLQALPEAE---KRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQ 203
            MP+  R I H L   DP +Y Q      +P   +L++++MAS  G + QLG+LA+YA +MF  L+  A+  SK++  AS + S++L  L E E       + +G+  G D              A +   E AS +F+ EAMP  +  RY +  V R P L  +D ++  E     T+     CA R+SNP+FF++E+ + E ERQ
Sbjct:    1 MPIVKRGIAHPLAYPDPALYEQ------SPPDMILQNIDMASFSGAMQQLGILASYATEMFQDLYDIANEQSKRLVRASEKTSSILARLEEVEGVVSSNTQMLGTVGGTD-------------VAVREPVEVASGLFNKEAMPSAIKSRYVNEAVQRAPPLDTVDEIVLPE-----TRVEWGPCAARFSNPKFFFEEFLQAEEERQ 182          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15470.1 vs. uniprot
Match: A0A7R9U748_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U748_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.850e-20
Identity = 72/206 (34.95%), Postives = 106/206 (51.46%), Query Frame = 0
Query:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPSTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADGLSKKISAASTRCSNLLQALPEAEK---RTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQ 203
            MP+  R I H L   DP++Y      + +P   VL++++MAS+ G +AQLG LA+YA +MF  L   A+  SK++ AAS +   LL  L + +       + +G+  G+      E    E Q       E  S +F  +AMP  +  RY +  V R P L  +D V+  E     TK     CA R+SNP+FF +EW++ E ERQ
Sbjct:    1 MPIVKRGIAHPLAYADPQLY------ENSPPELVLQNIDMASLSGAMAQLGNLASYATEMFRELMDIANEQSKRLVAASEKTEGLLLKLRDVDSVVSTNTKPLGAAGGV------EVTVREPQ-------EVDSGLFDKDAMPMAIRHRYENEVVQRAPPLQRLDTVVLPE-----TKKEWGPCADRFSNPRFFREEWFKAEKERQ 182          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15470.1 vs. uniprot
Match: A0A7S1C3S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3S4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.980e-5
Identity = 63/202 (31.19%), Postives = 85/202 (42.08%), Query Frame = 0
Query:    1 MPLTMRPIPHALN-LGDPEIYGQGPSGQGTPSTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADGLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALR------YSNPQFFYQEW 195
            MP+  RPI  A +  G  ++Y        TP T VL DV  A M G + Q+GVLA YA D+F+GL   A   + +I+A +TR + L+  L        EA G G   D     E +  ER  A                +P +   R   P V  V +L        H   SL   D   + A        +SNPQFF++ W
Sbjct:    2 MPVPGRPIQPAHDGEGVADLYKSS-----TPQT-VLADVAQAEMCGVIQQIGVLARYAADVFEGLTAEAAATNARIAADATRVTALVHVL--------EAAG-GIAPD---VPEHVVLERADA---------------GLPEFFTPRNRPPAVEEVLEL-------CHPVPSLAALDDFATAACPAPVARLFSNPQFFFETW 163          
BLAST of mRNA_E-siliculosus-1a_M_contig73.15470.1 vs. uniprot
Match: A0A7S3H440_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H440_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.090e-5
Identity = 57/212 (26.89%), Postives = 94/212 (44.34%), Query Frame = 0
Query:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPSTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADGLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQA-ESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKK 211
            MPLT R I    +    +I       + +   ++L D   A  VG L QL  LA +A ++F GL   +  L+++I +  +R + L  ALP+              +  N+A +    E QH +Q  ++  +  +    ++   L+ R  S +V      H +DA   H    L       + A RYSNP FF  +W  +++ R ++  REKK
Sbjct:    1 MPLTQRLISRDSSASYSKIM------ENSHGEELLTDKTFAETVGCLRQLSDLALFANEVFSGLLSLSVNLNERIESLHSRSAKLQVALPKL-------------VVTNSAFDIHGDEIQHHRQMLQNPQSQHLVDRSSISNALLLRCCSNQVKPRIQFHTLDAYAKH----LAIGSKSTTIAQRYSNPDFFLNQWCTVQVARMKQLEREKK 189          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FRX1_ECTSI3.120e-28889.37SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7S1XLA9_9STRA1.710e-2033.98Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9U748_9STRA8.850e-2034.95Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1C3S4_9STRA2.980e-531.19Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3H440_9STRA3.090e-526.89Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..227
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 376..388
score: 30.77
coord: 411..427
score: 38.82
coord: 446..471
score: 40.77
coord: 388..409
score: 30.91
NoneNo IPR availableGENE3D1.20.58.1570coord: 107..252
e-value: 5.1E-7
score: 31.6
coord: 649..714
e-value: 3.1E-7
score: 32.3
NoneNo IPR availableGENE3D1.20.5.340coord: 1..93
e-value: 3.5E-5
score: 26.0
IPR003124WH2 domainSMARTSM00246wh2_8coord: 649..666
e-value: 6.7E-4
score: 29.0
coord: 618..635
e-value: 4.5
score: 16.2
IPR003124WH2 domainPFAMPF02205WH2coord: 616..635
e-value: 7.3E-4
score: 19.3
coord: 646..669
e-value: 1.8E-6
score: 27.6
IPR003124WH2 domainPROSITEPS51082WH2coord: 649..666
score: 10.127
IPR003124WH2 domainPROSITEPS51082WH2coord: 618..635
score: 8.123
IPR028288SCAR/WAVE familyPANTHERPTHR12902WASP-1coord: 1..221
coord: 532..714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:290228..297257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15470.1mRNA_E-siliculosus-1a_M_contig73.15470.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 290228..298051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15470.1 ID=prot_E-siliculosus-1a_M_contig73.15470.1|Name=mRNA_E-siliculosus-1a_M_contig73.15470.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=716bp
MPLTMRPIPHALNLGDPEIYGQGPSGQGTPSTQVLEDVNMASMVGTLAQL
GVLATYAQDMFDGLFQTADGLSKKISAASTRCSNLLQALPEAEKRTAEAI
GSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSP
EVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLEL
ERQEKSVREKKQKKEERKRRKAAAKAAGASAGVEKDEERTRAPRPARKSL
GDWRGKLAVGAAGLGIGSGGGGVSRGASTRGAGDVSSLVGQDKVVVQKRE
AYSDKFYRKEEEEADTSYQIAPSDAREGAAVPSGGQQLQQLGALTPEDFN
RKLGSASEGGRLLFKPPSARGGESGGAGMSTSPPPPPPQQRPPPPQAPAA
RPGSSASPPLPPPPPTSARPPALPQPPQGGQSTATVAGGPSAYGAPPVPP
PPPTARPPPPRPAPPPPPPPPPTQPYAPRPSYQEPIVTPTLESEAMMGET
HARRPSYESWGIPPEPTQKFEYGGAPTVAPPAPPAPPPPAQMMSTPSEPP
PPPPPPPPPVAPPSRPPVAPPLPPVQEASQFGQPPLPPPMPPAMPSMGHA
PPPPSLPAAPPGGGGASMRGDLLASITNGKKLKTVERPAPVAGGGGGGGG
NELLDAIRNGAKLKKVEQPAAPAVETSNPLFGGNPGINEILARRKYLEAE
SEDSDSDDDSDWDDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028288SCAR/WAVE_fam
IPR003124WH2_dom