prot_E-siliculosus-1a_M_contig7.15202.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15202.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15202.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length417
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15202.1 vs. uniprot
Match: D8LSQ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSQ4_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 4.380e-134
Identity = 252/365 (69.04%), Postives = 259/365 (70.96%), Query Frame = 0 
Query:   52 MSLAQSAVKGTTTEASSYSSSDVPPTMLTKSAIAYNDDDGDALGNDDDEPEPFPEPFPVGRSTAINSXXXXXXXXXXXXXXXXXEAFLFSSSTATTTSRXXXXXXXXXXXXDYCDSGDAWCGTDDLCQQCQSLTTSGGNFTCPEAYPAAAASGNSSACEQLAATFCCFYGDAPTAQRCLGNEPTALYWECVLTGPASGCSLEDMPCYSGNSSAAQTQPFPSPSPTEAATTAPVQFGSGGEMEGVFTVSPTGAPTAFDRGSSLAGTASPTPAAPIASAGGDVDEAPAATRSPVAGNDDTESGGVGAGSGFNSAGTSSGGGDLDGAAEEAGDGSAACVAWSAATAVPRAVVTLGVALFLAARHAAAK 416
            MSLAQSAV+GTTTEA       VPPTMLTKSAIAYNDDDGDALGNDDDEPEPFPEPFPV RS     XXXXXXXXXXXX     EAFLFS+ST T+ S             DYCDSGDAWCGTDDLCQ+CQSLTTSGG+ TC EAYPAAAASGNSSACEQLAATFCC+YGDA TAQRCLGNEPTALYWECVLTGPA GCSLEDMPCYSGNSSAAQTQP                        G                                       EAPAATRSPVAGNDDT SGG+GAGSGFNSAGTSSGGGD DGAAEEAGDG AA VAWS ATAVPRAVVTLGV LFLAARHAAAK
Sbjct:    1 MSLAQSAVQGTTTEAXXXXXXXVPPTMLTKSAIAYNDDDGDALGNDDDEPEPFPEPFPVRRSAXXXXXXXXXXXXXXXX-----EAFLFSNSTDTSYS--------DTSTYDYCDSGDAWCGTDDLCQECQSLTTSGGSLTCREAYPAAAASGNSSACEQLAATFCCYYGDASTAQRCLGNEPTALYWECVLTGPAFGCSLEDMPCYSGNSSAAQTQPXXXXXXXXXXXXXXXXXXXXXXXXG---------------------------------------EAPAATRSPVAGNDDTGSGGIGAGSGFNSAGTSSGGGDFDGAAEEAGDG-AARVAWSTATAVPRAVVTLGVTLFLAARHAAAK 312
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSQ4_ECTSI4.380e-13469.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 36..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..416
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 48..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:2206222..2207804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15202.1mRNA_E-siliculosus-1a_M_contig7.15202.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 2206222..2210383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15202.1 ID=prot_E-siliculosus-1a_M_contig7.15202.1|Name=mRNA_E-siliculosus-1a_M_contig7.15202.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=417bp
MGSGAERSTTTIAPHGQRSWGPAAAATSMWRGADSLLLLLLLTLLLTTRP
TMSLAQSAVKGTTTEASSYSSSDVPPTMLTKSAIAYNDDDGDALGNDDDE
PEPFPEPFPVGRSTAINSAAVAFNDDDGEALGHDDEAFLFSSSTATTTSR
STTTSYSDTSTYDYCDSGDAWCGTDDLCQQCQSLTTSGGNFTCPEAYPAA
AASGNSSACEQLAATFCCFYGDAPTAQRCLGNEPTALYWECVLTGPASGC
SLEDMPCYSGNSSAAQTQPFPSPSPTEAATTAPVQFGSGGEMEGVFTVSP
TGAPTAFDRGSSLAGTASPTPAAPIASAGGDVDEAPAATRSPVAGNDDTE
SGGVGAGSGFNSAGTSSGGGDLDGAAEEAGDGSAACVAWSAATAVPRAVV
TLGVALFLAARHAAAK*
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