prot_E-siliculosus-1a_M_contig7.15184.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig7.15184.1
Unique Name	prot_E-siliculosus-1a_M_contig7.15184.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	195

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15184.1 vs. uniprot
Match: D8LSN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN7_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 8.660e-119
Identity = 177/195 (90.77%), Postives = 186/195 (95.38%), Query Frame = 0

Query:    1 MACNFSLATAMGGGRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIAVVGTASTVGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATTIIPFSIYVRVSHT 195
            MACNFSLATAMGG RSLPELYVLQT+Y+VFLPVLMFGIPI+VDFWVQSLPMHLLP+HSFLAKAKVLADKF VFQALSMGLLV ISV+GSFSF GA+WPFQAVDTI V+G  +TVGLTGV+AHQIIGCIDDARAKSSSQSAKVFY KTKAGILKQIAGYFVLAGANASSAIAFTYTATGRAT IIPFSIYVRVSHT
Sbjct:    1 MACNFSLATAMGGSRSLPELYVLQTNYAVFLPVLMFGIPIIVDFWVQSLPMHLLPNHSFLAKAKVLADKFNVFQALSMGLLVSISVVGSFSFSGAKWPFQAVDTIIVLGAVTTVGLTGVLAHQIIGCIDDARAKSSSQSAKVFYDKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATAIIPFSIYVRVSHT 195

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15184.1 vs. uniprot
Match: A0A6H5JMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA3_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 1.360e-110
Identity = 178/216 (82.41%), Postives = 184/216 (85.19%), Query Frame = 0

Query:    1 MACNFSLATAMGGGRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIAVVGTAST----------------------VGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATTIIPFSIYVRVSH 194
            MACNFSLATAMGG  SLPELYVLQT+Y+VFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLAD+FKVFQALSMGLLVGISVIGSFSF GA+WPFQAVDTI V+G  +T                      VGLT VVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQI GYFVLAGANASSAIAFTYTATGRAT IIPFS YVRVSH
Sbjct:  135 MACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADEFKVFQALSMGLLVGISVIGSFSFSGAQWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQITGYFVLAGANASSAIAFTYTATGRATPIIPFSTYVRVSH 350

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15184.1 vs. uniprot
Match: D8LSN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN6_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 5.950e-110
Identity = 170/189 (89.95%), Postives = 174/189 (92.06%), Query Frame = 0

Query:    7 LATAMGGGRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIAVVGTASTVGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATTIIPFSIYVRVSHT 195
            L  + G  RSLPELYVLQTSYSVFLPVLMFGIPIVVDFW QSLPMHLLPDHSFLAKAKVLA KFK  QALSMGLLVGIS+IGSFSFGGAEWPF AVDTIAVVG ASTVGLT +VAHQI+GCIDDARAKSSSQSAKVFY KTKAGILKQIAGYFVLAGANASSAI FTYTATGRAT IIPFSIYVRVSHT
Sbjct:   17 LGDSDGRNRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWAQSLPMHLLPDHSFLAKAKVLAGKFKAVQALSMGLLVGISLIGSFSFGGAEWPFHAVDTIAVVGAASTVGLTDLVAHQIVGCIDDARAKSSSQSAKVFYDKTKAGILKQIAGYFVLAGANASSAITFTYTATGRATAIIPFSIYVRVSHT 205

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig7.15184.1 vs. uniprot
Match: A0A6H5JML4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML4_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.800e-88
Identity = 148/186 (79.57%), Postives = 153/186 (82.26%), Query Frame = 0

Query:   31 LPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQAVDTIAVVGTAST----------------------VGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATTIIPFSIYVRVSH 194
            LPVLMFGIPIVVDFWVQSLPMHLLPDHS LAKAKVLAD+F VFQALSMGLLVGI++IGSFSF GA WPFQAVDTI V+G  +T                      VGLT VVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQI GYFVLAGANASSAIAFTYTATGRAT IIPFSI VRVSH
Sbjct:    3 LPVLMFGIPIVVDFWVQSLPMHLLPDHSLLAKAKVLADEFNVFQALSMGLLVGIALIGSFSFSGARWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQITGYFVLAGANASSAIAFTYTATGRATPIIPFSIDVRVSH 188

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig7.15184.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig7.15184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LSN7_ECTSI	8.660e-119	90.77	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JMA3_9PHAE	1.360e-110	82.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LSN6_ECTSI	5.950e-110	89.95	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JML4_9PHAE	1.800e-88	79.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 47..71
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..26
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..93
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 94..104
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 129..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..46
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 105..128
None	No IPR available	TMHMM	TMhelix		coord: 155..177
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 104..126
None	No IPR available	TMHMM	TMhelix		coord: 72..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig7	contig	E-siliculosus-1a_M_contig7:2008814..2010992 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig7.15184.1	mRNA_E-siliculosus-1a_M_contig7.15184.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig7 2008814..2011008 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15184.1 ID=prot_E-siliculosus-1a_M_contig7.15184.1|Name=mRNA_E-siliculosus-1a_M_contig7.15184.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=195bp
MACNFSLATAMGGGRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWVQSLP
MHLLPDHSFLAKAKVLADKFKVFQALSMGLLVGISVIGSFSFGGAEWPFQ
AVDTIAVVGTASTVGLTGVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAG
ILKQIAGYFVLAGANASSAIAFTYTATGRATTIIPFSIYVRVSHT