prot_E-siliculosus-1a_M_contig7.15166.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15166.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15166.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length205
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: D7FN78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN78_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 2.190e-79
Identity = 159/204 (77.94%), Postives = 164/204 (80.39%), Query Frame = 0
Query:    1 VGLIGLTVRPAAGTAAAVDKNGGCRSLETISRAALRGEASKKSATGEKPKTSWLSSSSTSAAAAASPWSISKNRLEERARKAEYKAGRELVSKMSRKDSARRVQLPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSAXXXXXXXXXSTVATAPTSFLRNV 204
            +GL+GLTV PAAGT AAVDK+GGC+S ETISR AL+GEASKKSA                     SPWSISK  LEERARKAEYKAGRELVSKMSRKDSAR    PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSA XXXX     T   APTSFLRNV
Sbjct:  260 MGLVGLTVHPAAGTVAAVDKDGGCQSPETISRTALQGEASKKSAXXXXXXXXXXXXXXXXXXXXXSPWSISKKLLEERARKAEYKAGRELVSKMSRKDSAR----PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSAAXXXXGAAP-TATIAPTSFLRNV 458          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: V5FZU4_BYSSN (Nucleosome binding protein n=2 Tax=Byssochlamys spectabilis TaxID=264951 RepID=V5FZU4_BYSSN)

HSP 1 Score: 59.3 bits (142), Expect = 3.420e-8
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  106 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 169
            PK   S+Y+ F  E+  S +   PG+S   +   +GE W+ LSDE + PY +KA+AD+KRYED+
Sbjct:   26 PKRGLSAYMFFANEQRESVREQNPGISFGQVGKVLGERWKALSDEERRPYEEKAQADKKRYEDE 89          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: A0A168Q5V9_MUCCL (HMG box domain-containing protein n=5 Tax=Mucor TaxID=4830 RepID=A0A168Q5V9_MUCCL)

HSP 1 Score: 58.2 bits (139), Expect = 7.140e-8
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   91 VSKMSRKDSARRVQ----LPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAI 173
            V K++++++ +R +     PK   S+Y+ F  +K A  K   P  S   +   +GE W+ +SDE K PY  KAEAD+KRYED+  A+
Sbjct:    5 VQKVTKRETKKRGKKDPNAPKRGLSAYMFFSQDKRAQVKEENPEASFGTLGKLLGEKWKAMSDEEKKPYIDKAEADKKRYEDEKAAL 91          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: A0A8H7VAX4_9FUNG (HMG box domain-containing protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7VAX4_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 8.240e-8
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0
Query:  106 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAI 173
            PK   S+Y+ F  ++ A+ K   P  +   I   +GE W+ +SD+ K PY KKAEAD+KRYED+  A+
Sbjct:   30 PKRGLSAYMFFSQDQRATVKEESPDATFGQIGKLLGEKWKNMSDDEKKPYVKKAEADKKRYEDEKAAL 97          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: NHP6_CANAL (Non-histone chromosomal protein 6 n=6 Tax=Candida/Lodderomyces clade TaxID=1535325 RepID=NHP6_CANAL)

HSP 1 Score: 57.8 bits (138), Expect = 9.960e-8
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   96 RKDSARRVQLPKGPQ---SSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 169
            RK S+R+ + P  P+   S+Y+ F  E     +A  PG+S   +   +GE W+ L+ E KLPY  KAEAD+KRYE +
Sbjct:    6 RKKSSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRYEKE 82          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: UPI001C7FD2B0 (Non-histone chromosomal protein 6 n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C7FD2B0)

HSP 1 Score: 57.8 bits (138), Expect = 1.120e-7
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 0
Query:   87 GRELVSKMSRKDSARRVQLPKGPQ---SSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 169
            GREL     R+ + R+ + P  P+   S+Y+ F  E     +A  PG++   +   +GE W+ L+ + K+PY  KAEAD+KRYE +
Sbjct:    3 GRELAMVAERRKTTRKKKDPDAPKRALSAYMFFANENRDIVRAENPGIAFGQVGKLLGEKWKALTGDEKIPYESKAEADKKRYEKE 88          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: A0A0F4YSN3_TALEM (Nonhistone chromosomal protein 6B n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YSN3_TALEM)

HSP 1 Score: 57.8 bits (138), Expect = 1.420e-7
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:  106 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 169
            PK   S+Y+ F  E+  + +   PG+S   +   +GE W+ LSDE + PY +KA+AD+KRYED+
Sbjct:   25 PKRGLSAYMFFANEQREAVREQNPGISFGQVGKILGERWKALSDEERRPYEEKAQADKKRYEDE 88          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: A0A0C7NBT0_9SACH (LALA0S09e03686g1_1 n=4 Tax=Lachancea TaxID=300275 RepID=A0A0C7NBT0_9SACH)

HSP 1 Score: 57.4 bits (137), Expect = 1.420e-7
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   96 RKDSARRVQLPKGPQ---SSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQ 169
            RK + RR + P  P+   S+Y+ F  E     +A  PG++   +   +GE W+ L+D+ K+PY  KAEAD+KRYE +
Sbjct:    8 RKKTTRRKKDPNAPKRALSAYMFFANENRDIVRAENPGVTFGQVGRILGEKWKALNDDEKVPYESKAEADKKRYESE 84          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: K8EPY9_9CHLO (Nucleosome binding protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EPY9_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.460e-7
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  106 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYE 167
            PK   S+Y  F  ++ A    A P M +T++   +GE WR +SD  K+PY KKA+AD+ RYE
Sbjct:   24 PKRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEKVPYNKKADADKVRYE 85          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Match: A0A8H7BXE0_9FUNG (Non-histone chromosomal protein 6 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BXE0_9FUNG)

HSP 1 Score: 57.0 bits (136), Expect = 2.880e-7
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query:  106 PKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAI 173
            PK   S+Y+ F  EK    K   P  +   I   +GE W+ ++DE K PY +KAEAD+KRYED+  A+
Sbjct:   30 PKRGLSAYMFFSQEKRQEVKDENPEATFGQIGKILGEKWKGMTDEQKKPYVEKAEADKKRYEDEKAAV 97          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN78_ECTSI2.190e-7977.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
V5FZU4_BYSSN3.420e-843.75Nucleosome binding protein n=2 Tax=Byssochlamys sp... [more]
A0A168Q5V9_MUCCL7.140e-837.93HMG box domain-containing protein n=5 Tax=Mucor Ta... [more]
A0A8H7VAX4_9FUNG8.240e-842.65HMG box domain-containing protein n=1 Tax=Mucor pl... [more]
NHP6_CANAL9.960e-841.56Non-histone chromosomal protein 6 n=6 Tax=Candida/... [more]
UPI001C7FD2B01.120e-736.05Non-histone chromosomal protein 6 n=1 Tax=Scheffer... [more]
A0A0F4YSN3_TALEM1.420e-742.19Nonhistone chromosomal protein 6B n=1 Tax=Rasamson... [more]
A0A0C7NBT0_9SACH1.420e-738.96LALA0S09e03686g1_1 n=4 Tax=Lachancea TaxID=300275 ... [more]
K8EPY9_9CHLO1.460e-743.55Nucleosome binding protein n=1 Tax=Bathycoccus pra... [more]
A0A8H7BXE0_9FUNG2.880e-742.65Non-histone chromosomal protein 6 n=1 Tax=Apophyso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 156..176
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 158..178
score: 23.46
coord: 121..139
score: 36.45
coord: 139..158
score: 37.78
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 36..174
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 36..174
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 105..175
e-value: 1.9E-18
score: 77.3
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 106..171
e-value: 1.6E-18
score: 66.8
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 106..174
score: 16.434
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 90..189
e-value: 3.7E-21
score: 77.2
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 96..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1867340..1869385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15166.1mRNA_E-siliculosus-1a_M_contig7.15166.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1867340..1869385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15166.1 ID=prot_E-siliculosus-1a_M_contig7.15166.1|Name=mRNA_E-siliculosus-1a_M_contig7.15166.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=205bp
VGLIGLTVRPAAGTAAAVDKNGGCRSLETISRAALRGEASKKSATGEKPK
TSWLSSSSTSAAAAASPWSISKNRLEERARKAEYKAGRELVSKMSRKDSA
RRVQLPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDE
MKLPYTKKAEADRKRYEDQLRAIARSAATSAAATTTTGAASTVATAPTSF
LRNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036910HMG_box_dom_sf
IPR009071HMG_box_dom