Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002151 | Kinesin light chain | PRINTS | PR00381 | KINESINLIGHT | coord: 97..114
score: 48.89
coord: 32..50
score: 26.32
coord: 141..161
score: 49.52
coord: 176..197
score: 24.55 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 101..134
e-value: 0.043
score: 23.0
coord: 143..176
e-value: 0.38
score: 19.8
coord: 59..92
e-value: 0.016
score: 24.3 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 188..234
e-value: 1.3E-5
score: 27.1 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 1..128
e-value: 1.5E-42
score: 147.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 129..187
e-value: 2.2E-14
score: 55.1 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 53..204 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 184..225
e-value: 6.2E-5
score: 22.7 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 19..91
e-value: 2.2E-13
score: 50.3
coord: 100..173
e-value: 9.9E-23
score: 80.2 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 1..101 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 88..199 |
| None | No IPR available | PANTHER | PTHR45783:SF3 | KINESIN LIGHT CHAIN | coord: 88..199 |
| None | No IPR available | PANTHER | PTHR45783 | FAMILY NOT NAMED | coord: 191..232 |
| None | No IPR available | PANTHER | PTHR45783:SF3 | KINESIN LIGHT CHAIN | coord: 1..101
coord: 191..232 |
| IPR013026 | Tetratricopeptide repeat-containing domain | PROSITE | PS50293 | TPR_REGION | coord: 59..176
score: 14.212 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig10453.331.1 ID=prot_E-siliculosus-1a_F_contig10453.331.1|Name=mRNA_E-siliculosus-1a_F_contig10453.331.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=234bp
ALAINEVALGVDHPSTITSRGWMADLYENQGFLDKASPLLKEVVSARERV
QGRDHPDVASALNNRAALLMSQGKLSEAEPLFKRTQEIFEKSLGRDHPNV
ATILNNRAQLLESQGKYEEAGPLYERSLAIREKVYGPDHPAVATALNNRA
GLLNAQGKFAEAQPLFERALAINEVALGVDHPSTITSRGWMADLYENQGF
LDKASPLLKEVVSARERVQGRDHPDVASALNNRA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
|