mRNA_E-siliculosus-1a_F_contig10453.331.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig10453	contig	E-siliculosus-1a_F_contig10453:365..2249 +

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig10453.331.1	prot_E-siliculosus-1a_F_contig10453.331.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig10453 365..2248 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927547.773418-CDS-E-siliculosus-1a_F_contig10453:364..580	1622927547.773418-CDS-E-siliculosus-1a_F_contig10453:364..580	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 365..580 +
1696318579.5698833-CDS-E-siliculosus-1a_F_contig10453:364..580	1696318579.5698833-CDS-E-siliculosus-1a_F_contig10453:364..580	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 365..580 +
1622927547.7837265-CDS-E-siliculosus-1a_F_contig10453:969..1095	1622927547.7837265-CDS-E-siliculosus-1a_F_contig10453:969..1095	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 970..1095 +
1696318579.580557-CDS-E-siliculosus-1a_F_contig10453:969..1095	1696318579.580557-CDS-E-siliculosus-1a_F_contig10453:969..1095	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 970..1095 +
1622927547.797694-CDS-E-siliculosus-1a_F_contig10453:1430..1556	1622927547.797694-CDS-E-siliculosus-1a_F_contig10453:1430..1556	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 1431..1556 +
1696318579.5954013-CDS-E-siliculosus-1a_F_contig10453:1430..1556	1696318579.5954013-CDS-E-siliculosus-1a_F_contig10453:1430..1556	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 1431..1556 +
1622927547.8098288-CDS-E-siliculosus-1a_F_contig10453:2014..2248	1622927547.8098288-CDS-E-siliculosus-1a_F_contig10453:2014..2248	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 2015..2248 +
1696318579.6080627-CDS-E-siliculosus-1a_F_contig10453:2014..2248	1696318579.6080627-CDS-E-siliculosus-1a_F_contig10453:2014..2248	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig10453 2015..2248 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig10453:365..2249+
coding sequence from alignment at E-siliculosus-1a_F_contig10453:365..2249+

protein sequence of mRNA_E-siliculosus-1a_F_contig10453.331.1

>prot_E-siliculosus-1a_F_contig10453.331.1 ID=prot_E-siliculosus-1a_F_contig10453.331.1|Name=mRNA_E-siliculosus-1a_F_contig10453.331.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=234bp
ALAINEVALGVDHPSTITSRGWMADLYENQGFLDKASPLLKEVVSARERV
QGRDHPDVASALNNRAALLMSQGKLSEAEPLFKRTQEIFEKSLGRDHPNV
ATILNNRAQLLESQGKYEEAGPLYERSLAIREKVYGPDHPAVATALNNRA
GLLNAQGKFAEAQPLFERALAINEVALGVDHPSTITSRGWMADLYENQGF
LDKASPLLKEVVSARERVQGRDHPDVASALNNRA

mRNA from alignment at E-siliculosus-1a_F_contig10453:365..2249+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig10453.331.1 ID=mRNA_E-siliculosus-1a_F_contig10453.331.1|Name=mRNA_E-siliculosus-1a_F_contig10453.331.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1885bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10453:365..2249+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTCTGGCAATCAATGAAGTTGCTCTGGGGGTGGACCACCCGAGCACGAT
CACGTCTCGTGGGTGGATGGCGGACTTGTACGAGAATCAGGGGTTCCTGG
ACAAGGCTTCTCCTCTCTTGAAGGAGGTTGTGAGCGCCCGTGAGCGTGTT
CAAGGACGTGATCATCCGGATGTCGCTTCAGCGCTCAACAACAGGGCGGC
GTTGTTGATGAGTCAGGTGAGAGCCATCAGAAAATTCCAGGAAGTTTCTT
GTGGTACCCCACAGATTTCGGGAGTGCCCAACAACAGGGCGCAGTTGTTG
AAGAGTCAGGTGATAGCCATCAGAAAATTCCAGGAAGTTTCTTGTGGTAC
CCGATAGATTTCGGAAGTGCTCAACAACAGGGCGGGGTTGTTGTACAAGC
AGGTGAGAGCGGTCAGAATATTCCGAGAAATTTCTTGTGGTGCTCTGTGG
ATGTTGTAGAGCTCAACAACCGGGCGGGGTTGTTGAGAGCGCAGGTGAGA
ACCGCCAGAATTTTCTCGTAAACTTCGTAGGGTCCACATTAGTCGGTGAA
ATATTGACGTTTTTTGTCGACCACTGCCTAACACCAACCACCGCTTGCTA
TCCAGGGCAAGCTTTCGGAAGCCGAGCCGCTATTCAAGAGGACGCAAGAG
ATCTTTGAGAAATCGTTAGGGCGGGATCATCCCAACGTCGCCACAATTCT
CAACAACAGGGCGCAGTTATTGGAGAGTCAGGTGAGAGCCATCAGAAAAT
TTCAGGAAGTTTCTTGTGGTACCCGATAGATTTCGGAAGTGCTCAACAAC
CGGGCGGGGTTGTTGAGCATTTGTTCCTCCGCCTTGAGCTGCGCTGGCCG
TGACATTTCTCCTTTTGCATTTTATTTCGTAATCCAGGGCAAATACGACG
AAGCAGACCCTCTGTACGCTCGGGTCCTCCAAATCCTTGCTGCAACAGTA
GGCGAAGAACACCCAAACTACGCTGTAGCGCTCAACAACCGGGCGGGGTT
GTTGAATATTCCTCCGCATTCATTGTCGTCATTCCATTAATTTAACATAT
TTTCGTCACGTTCCAGGGCAAGTACGAGGAAGCCGGGCCGCTGTATGAAC
GTTCCCTTGCTATCCGCGAGAAAGTATACGGGCCTGATCATCCTGCGGTG
GCAACCGCGCTCAACAACCGGGCGGGGTTGTTGAACGCCCAGGTGAGAGC
CGACAGAATATTCCAGGAAATTTCTTTTAGTGTTTATTGAATATTTCGCA
GTGCTCAACAACCGGACGCTTATGTTGAAGAATCAGGTAAGAGCCATCAA
TGTTTCCGGGATTTTTTTTGTGGTCATCGGTGGATGTTGTAGGGTGTTGC
CCAAGAACCGGGCGGGGTTGTTGATGAGTCAGGTGAGAGCCAAGCGATTC
TTCCTTCTCGAAGATGCTTCTTGATTCTCCTTCAAAGCTTTTCTAGATGC
TTCTAGATGCCTCTGGACCTCCTTTCTGGTTCTAGAACACGTGGAACAAT
TTTGGCACGGTGTCAATGGTCTGGGAGGCTGTTGTTTCTTCCGCCAATTC
ATGTCACGGTGGGAACTTTGCTGCGGAACATGGCGGTGCCACCGTAATTT
CGCTGTCACCTTGCAATGTGTAAACTGCTGTTCTCGAATGTTTCTTACAG
GGAAAGTTCGCTGAGGCGCAGCCGTTGTTCGAAAGAGCTCTGGCAATCAA
TGAAGTTGCTCTGGGGGTGGACCACCCGAGCACGATCACGTCTCGTGGGT
GGATGGCGGACTTGTACGAGAATCAGGGGTTCCTGGACAAGGCTTCTCCT
CTCTTGAAGGAGGTTGTGAGCGCCCGTGAGCGTGTTCAAGGACGTGACCA
TCCGGATGTCGCTTCAGCGCTCAACAACAGGGCGG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10453:365..2249+

>mRNA_E-siliculosus-1a_F_contig10453.331.1 ID=mRNA_E-siliculosus-1a_F_contig10453.331.1|Name=mRNA_E-siliculosus-1a_F_contig10453.331.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10453:365..2249+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTCTGGCAATCAATGAAGTTGCTCTGGGGGTGGACCACCCGAGCACGAT
CACGTCTCGTGGGTGGATGGCGGACTTGTACGAGAATCAGGGGTTCCTGG
ACAAGGCTTCTCCTCTCTTGAAGGAGGTTGTGAGCGCCCGTGAGCGTGTT
CAAGGACGTGATCATCCGGATGTCGCTTCAGCGCTCAACAACAGGGCGGC
GTTGTTGATGAGTCAGGCTCTGGCAATCAATGAAGTTGCTCTGGGGGTGG
ACCACCCGAGCACGATCACGTCTCGTGGGTGGATGGCGGACTTGTACGAG
AATCAGGGGTTCCTGGACAAGGCTTCTCCTCTCTTGAAGGAGGTTGTGAG
CGCCCGTGAGCGTGTTCAAGGACGTGATCATCCGGATGTCGCTTCAGCGC
TCAACAACAGGGCGGCGTTGTTGATGAGTCAGGGCAAGCTTTCGGAAGCC
GAGCCGCTATTCAAGAGGACGCAAGAGATCTTTGAGAAATCGTTAGGGCG
GGATCATCCCAACGTCGCCACAATTCTCAACAACAGGGCGCAGTTATTGG
AGAGTCAGGGCAAGCTTTCGGAAGCCGAGCCGCTATTCAAGAGGACGCAA
GAGATCTTTGAGAAATCGTTAGGGCGGGATCATCCCAACGTCGCCACAAT
TCTCAACAACAGGGCGCAGTTATTGGAGAGTCAGGGCAAGTACGAGGAAG
CCGGGCCGCTGTATGAACGTTCCCTTGCTATCCGCGAGAAAGTATACGGG
CCTGATCATCCTGCGGTGGCAACCGCGCTCAACAACCGGGCGGGGTTGTT
GAACGCCCAGGGCAAGTACGAGGAAGCCGGGCCGCTGTATGAACGTTCCC
TTGCTATCCGCGAGAAAGTATACGGGCCTGATCATCCTGCGGTGGCAACC
GCGCTCAACAACCGGGCGGGGTTGTTGAACGCCCAGGGAAAGTTCGCTGA
GGCGCAGCCGTTGTTCGAAAGAGCTCTGGCAATCAATGAAGTTGCTCTGG
GGGTGGACCACCCGAGCACGATCACGTCTCGTGGGTGGATGGCGGACTTG
TACGAGAATCAGGGGTTCCTGGACAAGGCTTCTCCTCTCTTGAAGGAGGT
TGTGAGCGCCCGTGAGCGTGTTCAAGGACGTGACCATCCGGATGTCGCTT
CAGCGCTCAACAACAGGGCGGGAAAGTTCGCTGAGGCGCAGCCGTTGTTC
GAAAGAGCTCTGGCAATCAATGAAGTTGCTCTGGGGGTGGACCACCCGAG
CACGATCACGTCTCGTGGGTGGATGGCGGACTTGTACGAGAATCAGGGGT
TCCTGGACAAGGCTTCTCCTCTCTTGAAGGAGGTTGTGAGCGCCCGTGAG
CGTGTTCAAGGACGTGACCATCCGGATGTCGCTTCAGCGCTCAACAACAG
GGCG

mRNA_E-siliculosus-1a_F_contig10453.331.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

ZOOM

x 1

POSITION

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