prot_E-siliculosus-1a_F_contig157.3294.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig157.3294.1
Unique Nameprot_E-siliculosus-1a_F_contig157.3294.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length287
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig157.3294.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 6.030e-168
Identity = 226/239 (94.56%), Postives = 228/239 (95.40%), Query Frame = 0 
Query:   48 TTAVQVRGHLQQQSAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDEKADLEAGCDECDVSCGEFQECLLYEDGLESEYYCADTCDDPDRCADNETCVLTEVACIRAPCPPVASCEATDNCDGACDDIQECLQYARNDKYYCSDTCDSPAACEEGEECSTRPRKWCRSSGYDGCPEKRSCR 286
            TT V  RG    +SAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDEKADLEAGC ECDVSCGEFQECLLYEDGLESEYYCADTCDDPDRCADNETCVLTEVACIRAPCPPVASCEAT+NCDGACDD QECLQYARN KYYCSDTCDSPAACEEGEECSTRPRKWCRSSGYDGCPEKR CR
Sbjct:   48 TTTVVFRGTALSKSAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDEKADLEAGCGECDVSCGEFQECLLYEDGLESEYYCADTCDDPDRCADNETCVLTEVACIRAPCPPVASCEATENCDGACDDTQECLQYARNGKYYCSDTCDSPAACEEGEECSTRPRKWCRSSGYDGCPEKRRCR 286
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BLAST of mRNA_E-siliculosus-1a_F_contig157.3294.1 vs. uniprot
Match: W2QDR7_PHYPN (Uncharacterized protein n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QDR7_PHYPN)

HSP 1 Score: 64.3 bits (155), Expect = 2.750e-9
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:  163 CDVSCGEFQECLLYE-DGLESEYYCADTCDDPDRCADNETCVLTEVACIRAPCPPVASC 220
            C + CG+FQEC +YE DG +   YCAD C +  RC     C L EV CIRAPCPP+A+C
Sbjct:   74 CTMECGDFQECRIYEPDGSD---YCADVCAEG-RCPKGSICELQEVQCIRAPCPPMATC 128
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BLAST of mRNA_E-siliculosus-1a_F_contig157.3294.1 vs. uniprot
Match: A0A329SZI3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SZI3_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.790e-9
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:  159 GCDECDVSCGEFQECLLYEDGLESEYYCADTCDDPDRCADNETCVLTEVACIRAPCPPVASC 220
            G   C + CG+FQEC +YE   +   YCAD C +  RC +  TC L EV CIRAPCPPVA+C
Sbjct:  640 GSPTCTMECGDFQECRIYEP--DDSEYCADVCAEG-RCPEGFTCELQEVQCIRAPCPPVATC 698
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig157.3294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCN7_ECTSI6.030e-16894.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2QDR7_PHYPN2.750e-954.24Uncharacterized protein n=14 Tax=Phytophthora para... [more]
A0A329SZI3_9STRA4.790e-953.23Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.120coord: 32..163
e-value: 1.9E-6
score: 30.0
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 59..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig157contigE-siliculosus-1a_F_contig157:10469..13986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig157.3294.1mRNA_E-siliculosus-1a_F_contig157.3294.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig157 10469..13986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig157.3294.1 ID=prot_E-siliculosus-1a_F_contig157.3294.1|Name=mRNA_E-siliculosus-1a_F_contig157.3294.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=287bp
GPQHDTHSFRSARVRPFVAQPSLARLRVHMSRPVHHALRICPGDLDYTTA
VQVRGHLQQQSAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAI
CGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPD
DEKADLEAGCDECDVSCGEFQECLLYEDGLESEYYCADTCDDPDRCADNE
TCVLTEVACIRAPCPPVASCEATDNCDGACDDIQECLQYARNDKYYCSDT
CDSPAACEEGEECSTRPRKWCRSSGYDGCPEKRSCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold