prot_E-siliculosus-1a_F_contig1565.3266.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1565.3266.1
Unique Nameprot_E-siliculosus-1a_F_contig1565.3266.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length224
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: D8LAT3_ECTSI (Bile Acid:Na+ symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT3_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 5.340e-133
Identity = 199/223 (89.24%), Postives = 208/223 (93.27%), Query Frame = 0 
Query:    1 MASTSKSYEKARASVEKATGHFADVQTISARDVLRLEQEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT 223
            MASTSKSYEKARASVEKATGHFADVQTISA+DVLRLEQEGK+VLLVDVRTE+EMKVSMLRGALTR+             EFENSSLGEAARTG +F+ERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAA++VESG SPGSGP+NGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT
Sbjct:   24 MASTSKSYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTRE-------------EFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT 233
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A6H5KXH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH1_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 4.580e-37
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0 
Query:    1 MASTSKSYEKARASVEKATGHFADVQTISARDVLRLEQEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQT 78
            MASTSKSYEKARASVEKATGHFAD+QTISA+DVLRLEQEGK+VLLVDVRTE+EMKVSMLRGALTRQAPQPS TTC QT
Sbjct:    1 MASTSKSYEKARASVEKATGHFADIQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTRQAPQPSATTCLQT 78
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A836CAM6_9STRA (Bile Acid:Na+ symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 7.260e-36
Identity = 82/207 (39.61%), Postives = 107/207 (51.69%), Query Frame = 0 
Query:    8 YEKARASVEKATGHFADVQTISARDVLRLEQEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAF 214
            Y KAR S    TG FAD+ T+SA +VLRL   G  VLLVDVR  EE  VSM+ GA++               EFE+S            +++ G    A   V PYCT+G+RSG YA+KL  LGY  VRN EG+V+WTHD+G+GLV R                   G E K +H +G PWD  + D+ ++ F    W  S  + A+
Sbjct:    5 YTKARESCMHYTGEFADIATLSALEVLRLRTNGTPVLLVDVRLPEEQDVSMIEGAIS-------------LDEFESSHR----------RDQYGPAALANTTVVPYCTIGYRSGAYARKLKTLGYRHVRNGEGIVMWTHDIGSGLVDR------------------DGRETKYVHTYGPPWDLVASDYHSVHFGVWNWIQSHSRGAW 170
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: R1D8G3_EMIHU (Rhodanese domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D8G3_EMIHU)

HSP 1 Score: 89.0 bits (219), Expect = 1.850e-18
Identity = 67/213 (31.46%), Postives = 96/213 (45.07%), Query Frame = 0 
Query:    9 EKARASVEKATGHFADVQTISARDVLRLEQEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYP-------SVRNSEGVVLWTHDVGNGLVARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAF 214
            + A A +   T  FA +   SA DV+ ++Q G+ V+L+DVR+  E  VS L GAL + +                      A    +  ER      A  V+ P+CT+GFRSG Y + +   G          VRN EGVVLW+HDVG  +                      G  V+ LHV+GS WD A+D F+T+ F   G   + ++ A+
Sbjct:    7 DAALAELRARTAGFAGLPLASASDVISMQQGGRDVILIDVRSPPERAVSTLPGALDQHS---------------------FAALAREEPERV-----AAAVLVPFCTIGFRSGLYCEWIRGGGLGMAASSELDVRNGEGVVLWSHDVGTFVQ--------------------DGAPVRSLHVYGSAWDLAADGFDTVTFGPAGHLSAALRVAW 173
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A813CHA3_9DINO (Hypothetical protein (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CHA3_9DINO)

HSP 1 Score: 90.1 bits (222), Expect = 3.010e-18
Identity = 70/191 (36.65%), Postives = 101/191 (52.88%), Query Frame = 0 
Query:   38 QEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLV-----------ARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSK 216
            ++G+ V+LVDVR +EEM VSM+ G++T++              FE+  L        Q             +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV            +AAE  ++G++  S  Q      V R+HV+G PWD A++ + T  F+ TG     +K   SK
Sbjct:   40 EKGEDVVLVDVRCKEEMDVSMIPGSVTKE-------------HFESQLLPGLRAADPQP------------LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAAE--DAGEALTSAWQP-----VTRVHVYGKPWDMAAEGYTTEFFSQTGGAWRFLKQKCSK 197
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A813HB18_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HB18_POLGL)

HSP 1 Score: 89.0 bits (219), Expect = 8.090e-17
Identity = 75/222 (33.78%), Postives = 110/222 (49.55%), Query Frame = 0 
Query:    9 EKARASVEKATGHFADVQTISARDVLRLEQEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERSGEGEEAWGVVAPYCTVGFRSGQYAKKLV-DLGYPSVRNSEGVVLWTHDVGNGLV-------ARAAE---QVESGDSPGSGPQNGSGV---------------EVKRLHVFGSPWDHASDDFETIKFTATG 204
            E+ARA  +K  G    ++T   R+ L    +G+ ++LVDVRT EEM+VSM+ GA+ +               FE   L +      Q  ++      +  ++ PYCTVG+RSG Y ++LV + G+ +VRN EGV++WT D G+ LV       +RA     QV    S G+ P +G                   V  +HV+G PWD A++ F TI FT  G
Sbjct:  213 EEARAKADK-EGPL--IETPELRERLA---KGEDIILVDVRTPEEMQVSMIPGAVAKDL-------------FEAEILPKLLEGRQQDGQQQAIDSLSSPLIVPYCTVGYRSGLYCRELVNEHGFSNVRNGEGVIMWTFD-GSVLVKPLPGAPSRAPALPPQVYGKGSEGAQPSSGEAAGLVSGGGTKTATAWQSVSEVHVYGKPWDMAAEGFTTIYFTPVG 414
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A812UW94_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UW94_9DINO)

HSP 1 Score: 88.6 bits (218), Expect = 1.260e-16
Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 0 
Query:   38 QEGKRVLLVDVRTEEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLVARAAEQV-----ESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATG 204
            ++G+ V+LVDVR +EEM VSM+ G++T++              FE+  L        Q             +V PYCTVG+RSG YAK+L++  G  +VRN EGV++WT D G+GLV  A         +S +  G  P   +   V R+HV+G PWD A++ + T  F+ +G
Sbjct:  622 EKGENVVLVDVRCKEEMDVSMIPGSVTKE-------------HFESQLLPGLRAADPQP------------LVVPYCTVGYRSGVYAKELMNKHGLQNVRNGEGVIMWTFD-GSGLVRPAPGAPGTVVGKSAEDAGEAPST-AWEPVTRVHVYGKPWDMAAEGYTTEFFSQSG 767
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A812J6E8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812J6E8_9DINO)

HSP 1 Score: 78.6 bits (192), Expect = 6.730e-15
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0 
Query:  109 VVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLV-----------ARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATG 204
            +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV            +AAE  ++G++  S  Q      V R+HV+G PWD A++ + T  F+ TG
Sbjct:   32 LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAAE--DAGEALTSAWQP-----VTRVHVYGKPWDMAAEGYTTEFFSQTG 131
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A812UEF0_9DINO (PPR4 protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812UEF0_9DINO)

HSP 1 Score: 82.8 bits (203), Expect = 1.020e-14
Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 0 
Query:  109 VVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLVARAAEQV--------------ESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSK 216
            +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV  A+  V              ++G++P S  Q      V R+HV+G PWD A++ + T  F+ TG     +K   SK
Sbjct:  351 LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGAVGTVDSAQVVGKAAGDAGETPTSAWQP-----VTRVHVYGKPWDMAAEGYTTEFFSQTGGAWRFLKQKCSK 467
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Match: A0A1Q9F5B3_SYMMI (Pentatricopeptide repeat-containing protein, chloroplastic n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9F5B3_SYMMI)

HSP 1 Score: 79.7 bits (195), Expect = 1.320e-13
Identity = 51/120 (42.50%), Postives = 71/120 (59.17%), Query Frame = 0 
Query:  109 VVAPYCTVGFRSGQYAKKLVDL-GYPSVRNSEGVVLWTHDVGNGLV-----------ARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSK 216
            +V PYCTVG+RSG YAK+L+D  G  +VRN EGV++WT D G+GLV            +AAE  ++G++  S  Q      V R+HV+G PWD A++ + T  F+ TG     +K   SK
Sbjct:  439 LVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAAE--DAGEALTSAWQP-----VTRVHVYGKPWDMAAEGYTTEFFSQTGGAWRFLKQKCSK 550
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1565.3266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAT3_ECTSI5.340e-13389.24Bile Acid:Na+ symporter family n=1 Tax=Ectocarpus ... [more]
A0A6H5KXH1_9PHAE4.580e-3792.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAM6_9STRA7.260e-3639.61Bile Acid:Na+ symporter family n=1 Tax=Tribonema m... [more]
R1D8G3_EMIHU1.850e-1831.46Rhodanese domain-containing protein n=3 Tax=Emilia... [more]
A0A813CHA3_9DINO3.010e-1836.65Hypothetical protein (Fragment) n=2 Tax=Symbiodini... [more]
A0A813HB18_POLGL8.090e-1733.78Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A812UW94_9DINO1.260e-1636.42Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812J6E8_9DINO6.730e-1544.44Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A812UEF0_9DINO1.020e-1441.46PPR4 protein (Fragment) n=1 Tax=Symbiodinium sp. C... [more]
A0A1Q9F5B3_SYMMI1.320e-1342.50Pentatricopeptide repeat-containing protein, chlor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 6..148
e-value: 1.8E-11
score: 45.8
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 21..140
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 39..153
score: 8.834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1565contigE-siliculosus-1a_F_contig1565:21340..26934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1565.3266.1mRNA_E-siliculosus-1a_F_contig1565.3266.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1565 21271..27578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1565.3266.1 ID=prot_E-siliculosus-1a_F_contig1565.3266.1|Name=mRNA_E-siliculosus-1a_F_contig1565.3266.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=224bp
MASTSKSYEKARASVEKATGHFADVQTISARDVLRLEQEGKRVLLVDVRT
EEEMKVSMLRGALTRQAPQPSTTTCRQTQEFENSSLGEAARTGNQFQERS
GEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGN
GLVARAAEQVESGDSPGSGPQNGSGVEVKRLHVFGSPWDHASDDFETIKF
TATGWFGSTVKSAFSKMFKKKKT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
IPR036873Rhodanese-like_dom_sf