mRNA_E-siliculosus-1a_F_contig1043.324.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A6H5KKR9_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKR9_9PHAE) HSP 1 Score: 883 bits (2282), Expect = 3.620e-311 Identity = 502/561 (89.48%), Postives = 506/561 (90.20%), Query Frame = 1 Query: 517 MPGVRPGRGADLAVGARQCSGGXXXXXXXXXXGTSRRWLWTAAAMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSCSGVRGSSEAGQRQREDKAPPTDAWRSPSASASTPATVRRADAALPQATAAGWGEDRSRSSAPPSWLDARVFLRGVSALHLRGGVRAMSAAAAPXXXXXEEAGEGGKKKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 2199
MPGVRPGRGADLAVGAR CSGGXXXXXXXXXXGTSRRWLWTAAAMTAXXXXXXXXXXXXXXXXXXX XXXXXXXXX SSCSGVRGSSEAGQ+QRED+APP DAWRSPSASASTPAT RA AA PQATAAGW ED SRSSAPPSWLDA VFLRGVSAL+LRGGVRAMS AAAP EEAGE GKKKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCD+EGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRH GMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGG KAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ
Sbjct: 1 MPGVRPGRGADLAVGARHCSGGXXXXXXXXXXGTSRRWLWTAAAMTAXXXXXXXXXXXXXXXXXXXDSMAATSAPGVAGGGRGGGRCELKNSRCSXXXXXXXXX-------KSSCSGVRGSSEAGQKQREDEAPPADAWRSPSASASTPATAPRAGAASPQATAAGWREDLSRSSAPPSWLDAGVFLRGVSALNLRGGVRAMSPAAAPSGRGSEEAGERGKKKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDKEGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHRGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGDKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 554
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: D8LTV6_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV6_ECTSI) HSP 1 Score: 704 bits (1818), Expect = 3.030e-244 Identity = 352/360 (97.78%), Postives = 352/360 (97.78%), Query Frame = 1 Query: 1120 MSAAAAPXXXXXEEAGEGGKKKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 2199
MSAAAAP EEAGEGGKKKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGG G KAGGSGAEA KPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ
Sbjct: 1 MSAAAAPSGGGGEEAGEGGKKKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGVGDKAGGSGAEAGKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 360
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A835Z7U5_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U5_9STRA) HSP 1 Score: 343 bits (880), Expect = 1.100e-104 Identity = 183/343 (53.35%), Postives = 240/343 (69.97%), Query Frame = 1 Query: 1180 KKVDGEGRGKRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIH---CDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 2199
+ D + + + VP A PLFTSV ++KGHR MED++FLS+DG F+AVYDGHGGA+VS+YLR+NLY V +LP + G E + +AL++AFK DD V+ + +GS AV+V IH G SII+ N+GDSRAVL R GKA+++T+DHKPNA E++RI G V W GF G IEGTGVYRING+LAVARAIGD RP++S E EI+++ + E DQF+I+A+DGLWDVM+S+E VQYV AVMGGAMG+ +EG+ G +D+P M L +WTQ YA+DRGMIRAA M RKKKMA YL +EA+RRG+ DN TV +++ +
Sbjct: 40 ESTDTKEQARDVP-APAPLFTSVQASKGHRSYMEDDYFLSADGRFAAVYDGHGGASVSKYLRQNLYTQVKANLPLEEQECGEEHIIQALKAAFKTVDDEVLKVRHWSYQGSTAVAVVIHPTVAGGNGNCSIITANVGDSRAVLCRRGKAVEITKDHKPNATAELDRIEALGGNVRWFGFIDPEGRPIEGTGVYRINGNLAVARAIGDSSERPFVSGECEIRSMPMDHEGDQFIIIATDGLWDVMTSDEVVQYVQAVMGGAMGALREGES--------RGEFPLASDRPVDMKLSDWTQRYADDRGMIRAAMMSRKKKMARYLAQEAIRRGTMDNVTVVVMFFR 373
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A4D9DDA2_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDA2_9STRA) HSP 1 Score: 315 bits (808), Expect = 5.860e-91 Identity = 177/340 (52.06%), Postives = 226/340 (66.47%), Query Frame = 1 Query: 1222 AGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGD-DVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCD----REG----------KVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWL 2196
AG P TSV + KG R MED+FF+S DGSF+ VYDGHGGA VS+YLR+NL + LP D G E V EAL +AF+ D+ V+ + GS AV V IH + +EG K ++I+ N+GDSRAVLSR G+A+DLT+DHKPN P E+ER+ G V W G G +EG GVYRING+LAVARA GD RP++S+E EIK + ++ E D+FVILA+DGLWDVMSSEEAV +VH+VM ++G+ EG G G G AG G +P M + +WT+ +A+DRG+IRAA M RKKKMA YL+EEA RRG++DN TV +VW
Sbjct: 309 AGGPYTTSVVAFKGQRSYMEDDFFISKDGSFAGVYDGHGGAAVSKYLRQNLNAQFLAALPDADMRRLGQEKVTEALATAFRVVDEAVVKVRHWAYMGSTAVVVVIHAEEAKAKEGVEEGGRAGALKRTLIAANVGDSRAVLSRRGQAVDLTDDHKPNKPSELERVKALGGTVRWYGLLEQDGSPMEGMGVYRINGNLAVARAFGDRSERPFVSSEAEIKQLAVE-EGDEFVILATDGLWDVMSSEEAVNFVHSVMSASVGALTEG---VGDGVGGAGAEGVAGQRPADMKIFDWTKQHADDRGIIRAAMMARKKKMARYLSEEAFRRGTSDNVTVVVVWF 644
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A7S1UJR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJR9_9STRA) HSP 1 Score: 276 bits (706), Expect = 3.140e-80 Identity = 155/340 (45.59%), Postives = 210/340 (61.76%), Query Frame = 1 Query: 1219 LAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPG---DDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTI--------HCDREGKVS--IISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 2199
L PL SV + +GHR MED F+S DGSF VYDGHGG+ VS +LR+ L+ +H ++ G + V A++ AF+ D+ V EGS A V I +G V I++ NLGDSRAVLSR GKA++LT DHKPNA RE R+ G V W G+ + G ++GTG +RING+LAV+RA GD RP++S E E+K+ + + + DQF+I+ASDGLWDVMSS EAVQYV ++ G++G+ +EG G ++P + L W++ Y++DRG++RAA M RKKKMA YL EEALRRG+ DN TV I+WL+
Sbjct: 25 LRSTPLI-SVVAAQGHRSYMEDTHFISRDGSFVGVYDGHGGSRVSAFLRKALHARFKEHWKEATATNNATGNDDVSRAVQQAFREVDEAVQRNQKIAVEGSTAAVVIIPHLLKPPPSAVADGGVPKRILTANLGDSRAVLSRKGKAVELTSDHKPNAARERRRVEDLGGAVKWFGYYDTEGRPVKGTGCWRINGNLAVSRAFGDKYDRPYVSGECELKSFEYREDEDQFIIVASDGLWDVMSSSEAVQYVQTMLTGSVGALREGSVQQG-------------NRPTDVDLRTWSRQYSKDRGLVRAALMSRKKKMAKYLVEEALRRGTFDNITVVILWLK 350
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A8K1C3Y4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y4_PYTOL) HSP 1 Score: 258 bits (660), Expect = 1.570e-74 Identity = 143/316 (45.25%), Postives = 201/316 (63.61%), Query Frame = 1 Query: 1276 MEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHV------MDHLPP--GDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 2199
MED ++SS FSAV+DGHGGA V++YL++NLY + +D + P G+ +++ LR A D VI ++ + +GS AV V +H D +I S N+GDSRAV+SRGG+ ++LT DHKPN P E+ RI + G V W G+ ++G IE G YRING+LAVARAIGD D RP++S EVEIK D D+F+++ASDGLWDV +S+EAV +VH V+ G +G G+E W SGA + +++ W+ Y DRGMI+AA + RK ++A YL +EAL RG++DN +V +VWL+
Sbjct: 1 MEDTHYVSSCKRFSAVFDGHGGAAVAQYLQQNLYSTLAPTLAQLDQVEPEEGNHTTSRSALEDMLRQAVDRVDADVIARSEWKYQGSTAVGVLLHGD-----AIFSFNVGDSRAVMSRGGQVVELTRDHKPNDPIELTRIQKLGGSVKWHGYVDAQGEPIEPYGAYRINGNLAVARAIGDRDLRPYVSGEVEIKQFDRDFTKDEFIVIASDGLWDVFTSDEAVTFVHDVLNGEVG-GRE--SWR---------SGAHGET--RVSIFEWSHQYKSDRGMIKAARLRRKTQIANYLVQEALFRGTSDNVSVVVVWLK 297
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A485L3M8_9STRA (Aste57867_15235 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3M8_9STRA) HSP 1 Score: 255 bits (651), Expect = 6.600e-72 Identity = 148/338 (43.79%), Postives = 196/338 (57.99%), Query Frame = 1 Query: 1207 KRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWL--------SAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWL 2196
KR A + L S ++ +G R MED F+S F+AV+DGHGGA+VS YL+ +LY V+ HL P D + L+ + LR+AFK AD ++ + + +GS A +V + D I S N+GDSRAVL R G+AL+LT DHKPN P E +RI G V W G + G + G YRIN +LAVARA GD D RP++ S E+E+K + D+F++LASDGLWDV +S E V +V V+ G +G G+E W SG+ AD + L W Y D MI+AA RK+ MA YLT+EAL RGS DN VA+VWL
Sbjct: 81 KRTTKADQQLLVSTSAVRGDRATMEDTLFVSPSHRFAAVFDGHGGAHVSRYLQAHLYDLVVSHLGPDQDTWSLDEIDARLRAAFKAADTAILARKEWREQGSTATAVFLIDDL-----IWSMNVGDSRAVLCRDGRALNLTRDHKPNDPEERQRIEDAGGKVRWHGLRDAAGKPVVDMGAYRINSNLAVARAFGDGDQRPYVCGNNCWYVSGEMELKCFR-RDPKDKFIVLASDGLWDVFTSAEVVTFVKDVLSGEVG-GRE--SWR---------SGSHADTS--VELFEWRHKYKNDTSMIQAALTRRKEHMATYLTQEALYRGSVDNVAVAVVWL 398
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A024TM43_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TM43_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.440e-70 Identity = 141/352 (40.06%), Postives = 199/352 (56.53%), Query Frame = 1 Query: 1207 KRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEA----------------------VQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWL 2196
KR A PL S ++ +G RP MED F++ + F+AV+DGHGGA+VS YL+ NLY H++ +L P D + L+ ++ +LR AF+ D ++ + + +GS A +V + D I S N+GDSRAVL R G+A++LT DHKPN P E R+ + G V W G G I G YRIN +LAVARA GD D RP++S E+E+K + +D+F+++ASDGLWDV +S E V +V V+ G +GS + W SG+ A+ + L W Q Y D MI+AA RK++MA YLT+EAL RG+ DN V ++WL
Sbjct: 85 KRTSKADSPLLVSASAVRGDRPTMEDALFIAPNRRFTAVFDGHGGADVSSYLKANLYDHILANLGPAKDTWNLDEIETSLRDAFRTVDAVILERREWIAQGSTATAVLLMDDL-----IWSMNVGDSRAVLCRNGRAVNLTRDHKPNDPMERSRVEKAGGRVQWHGLRDPHGRPIVDMGAYRINSNLAVARAFGDGDQRPYVSGEMELKCFR-RDPSDKFIVVASDGLWDVFTSAEVSISRARRKYSGHDGHDRVSGKVVMFVRDVLAGEVGSR---ESWR---------SGSHAETS--VELFEWRQMYKNDSDMIQAALATRKEQMAKYLTQEALFRGTADNVAVVVIWL 416
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A6G0XM49_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM49_9STRA) HSP 1 Score: 249 bits (636), Expect = 6.490e-70 Identity = 142/330 (43.03%), Postives = 198/330 (60.00%), Query Frame = 1 Query: 1207 KRVPLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMDHLPPGDDVYGLETVQEALRSAFKCADDYVITQTPYGNEGSCAVSVTIHCDREGKVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAGGSGAEADKPPHMTLVNWTQSYAEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWL 2196
KR A L S ++ +G R MED F+S + F+AV+DGHGGA+V+ YL+ +LY +++ L P D + +E ++++LR AF+ AD ++ + + +GS A +V + D I S N+GDSRAVL R G+AL+LT DHKPN P E RI R G V W G +G I G YRIN +LAVARA GD D RP++S E+E+K + +D+F+++ASDGLWDV +S E V +V V+ G +G G+E W SG A+ + L W Q Y D MI+AA RK +MA YLT+ AL RG+ DN VA++WL
Sbjct: 84 KRTSKADTALLVSSSAVRGDRSTMEDTLFVSPNRRFAAVFDGHGGADVATYLKEHLYDAIVNALGP-KDTWSIEDIEQSLRLAFREADAAILDRREWLTQGSTATAVLLIDDL-----IWSMNVGDSRAVLCRNGRALNLTRDHKPNDPIERARIERCGGRVQWHGLRDPKGQPIPDMGAYRINANLAVARAFGDSDQRPYVSGEMELKCFR-RDPSDKFIVIASDGLWDVFTSAEVVTFVKDVLAGEVG-GRE--SWR---------SGGHAETS--VELFEWRQKYRNDSSMIKAAVSRRKAQMATYLTQGALYRGTADNVAVAVIWL 392
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Match: A0A7S2RHS5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHS5_9STRA) HSP 1 Score: 255 bits (652), Expect = 6.600e-70 Identity = 165/415 (39.76%), Postives = 223/415 (53.73%), Query Frame = 1 Query: 1216 PLAGRPLFTSVASTKGHRPRMEDEFFLSSDGSFSAVYDGHGGANVSEYLRRNLYKHVMD-------------------------------------------------------------HLPPGDDVY--GLET--VQEALRSAFKCADDYVITQTPYGNEGS-CAVSVTIH-CDREG---KVSIISCNLGDSRAVLSRGGKALDLTEDHKPNAPREMERIYRHDGMVTWEGFECSRGLQIEGTGVYRINGSLAVARAIGDIDYRPWLSAEVEIKTIDLKRETDQFVILASDGLWDVMSSEEAVQYVHAVMGGAMGSGKEGDKWSGGGGGKAG----------------GSGAEADKPPHMTLVNWTQSY-AEDRGMIRAATMLRKKKMAGYLTEEALRRGSTDNTTVAIVWLQ 2199
P G PL SV + +GHRP MED + ++ +G F+AVYDGHGGA VS YL+ LY+ ++ + P D + GL T + EAL AF+ + V + ++GS AV+V + +RE +VS+I+ N+GDSR VLSR G A++LTEDHKPN E RI G V W GF G +EGTGVYR+NG+LAVARA+GD +P++SAE +++ + E DQF+I+A+DGLWDVM+SEEAV YVH+VM ++G+ +EG+ GG G A ++PP + +WT + + DR MIRAA RK+KMA YL EEA+RRG+TDNTTV IVWLQ
Sbjct: 176 PPGGTPLLFSVQALRGHRPYMEDFYQVTPNGRFAAVYDGHGGAQVSRYLKLRLYQQLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPYSTSMASFARAEVHPSTDSHAEGLSTAGLSEALSRAFEQVESEVEEVDQWTHQGSTAAVAVVLEEGEREETLRRVSVITANVGDSRVVLSRRGTAVELTEDHKPNCAAEASRIKSLGGEVVWHGFYNKDGTPMEGTGVYRVNGNLAVARAVGDRTEKPYISAEPDVRITRVDPEKDQFLIVATDGLWDVMTSEEAVGYVHSVMADSVGAVREGNDSMGGXXXXXXXXXXXXXXXASTPGPLGHIAARERPPQRRIADWTALHPSSDRAMIRAAMANRKRKMARYLCEEAMRRGTTDNTTVIIVWLQ 590 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1043.324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1043.324.1 >prot_E-siliculosus-1a_F_contig1043.324.1 ID=prot_E-siliculosus-1a_F_contig1043.324.1|Name=mRNA_E-siliculosus-1a_F_contig1043.324.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=714bp MLTVVRRAVPGSTRPRRGAAVAAAGVQQQQSPTLYQTSTAATSSETSSSGback to top mRNA from alignment at E-siliculosus-1a_F_contig1043:21906..31476- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1043.324.1 ID=mRNA_E-siliculosus-1a_F_contig1043.324.1|Name=mRNA_E-siliculosus-1a_F_contig1043.324.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9571bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1043:21906..31476- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1043:21906..31476- >mRNA_E-siliculosus-1a_F_contig1043.324.1 ID=mRNA_E-siliculosus-1a_F_contig1043.324.1|Name=mRNA_E-siliculosus-1a_F_contig1043.324.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4284bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1043:21906..31476- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |