prot_E-siliculosus-1a_F_contig1538.3113.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1538.3113.1
Unique Nameprot_E-siliculosus-1a_F_contig1538.3113.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length559
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1538.3113.1 vs. uniprot
Match: D7FRF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF2_ECTSI)

HSP 1 Score: 542 bits (1396), Expect = 8.510e-186
Identity = 432/494 (87.45%), Postives = 437/494 (88.46%), Query Frame = 0 
Query:    1 MDGASRLGRSSEAGGERNWRTRRGQSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGGAGGEPGNRYGDGRWGGHGLGGXXXXXXXXXXXXXXXXGVGNDDGEGGRGGDIYDFDATGGSSRLTRSAEAKKRRGKMRESKLAPKATATLTTEQRVAEILARTRSPAAIATAPTASGGGGGDRGGSEDRPWTGGEGTGTFSDFAKSLRDLQQTGELDLSSEGAAGKSGLGSSESPRPNLRPXXXXXXXXXXXXXXXXXXXXSSGPLDLSGSLVIGEADMESRRRLLRPPYGGRITDSPVTSSRLWDVPTAAPSLAELEYQLRKLSPLRGMAAGASKARGAGGAGRGSRSPALKGRRGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGSRGGRVGRGGEMGGAGHGEAEQNPADLSSVVLVSSLSSTPGRRKSGSGRWATGXXXXXXGVTQTRMGGVDLGVDDLSAAHWE 494
            MDGASRLGRSSE GGERNWRTRRGQSE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DSGGAGGEPGNR+GDGRWGGHGL G     XXXXXXXXXXX             DIYDFDATGGSSRLTRSAEAKKRRGK +ESKLAPKA ATLTTEQRVAEILARTRSPAAIA APTASGGGG DRGGSEDRPWTGGEGTGTFSDFAKSLRDLQQTGELDLSSEG AGKSGLGSSESPRPNLRPXXXXXXXXXXXX        SSGPLDLSGSLVIGEADMES RRLLRPPYGGRITDSPVTSS  WDVPTAAPSLAELEYQLRKLSPLRGMAA ASKARGAG AGRGSRSPALK RRGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GSRGG +GRGGEMGGA HG+AEQ+PADLSSVVLVSSLSSTPGRRKSGSGRWA G      GVTQTRMGGVDLGVDDLSAAHWE
Sbjct:    1 MDGASRLGRSSETGGERNWRTRRGQSESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DSGGAGGEPGNRHGDGRWGGHGLDGAVGGGXXXXXXXXXXXXXXXXXXXX----DIYDFDATGGSSRLTRSAEAKKRRGKKKESKLAPKAKATLTTEQRVAEILARTRSPAAIAKAPTASGGGGDDRGGSEDRPWTGGEGTGTFSDFAKSLRDLQQTGELDLSSEGVAGKSGLGSSESPRPNLRPXXXXXXXXXXXXDGDDE---SSGPLDLSGSLVIGEADMESHRRLLRPPYGGRITDSPVTSSGPWDVPTAAPSLAELEYQLRKLSPLRGMAAVASKARGAGSAGRGSRSPALKSRRGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRGGGIGRGGEMGGARHGDAEQSPADLSSVVLVSSLSSTPGRRKSGSGRWAKGQGQG--GVTQTRMGGVDLGVDDLSAAHWE 481
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BLAST of mRNA_E-siliculosus-1a_F_contig1538.3113.1 vs. uniprot
Match: A0A6H5KN35_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN35_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 4.740e-55
Identity = 138/157 (87.90%), Postives = 143/157 (91.08%), Query Frame = 0 
Query:  131 LTRSAEAKKRRGKMRESKLAPKATATLTTEQRVAEILARTRSPAAIATAPTASGGGGGDRGGSEDRPWTGGEGTGTFSDFAKSLRDLQQTGELDLSSEGAAGKSGLGSSESPRPNLRPXXXXXXXXXXXXXXXXXXXXSSGPLDLSGSLVIGEADME 287
            LTRSA+AKKRRGK +ESKLAP+A ATLTTEQRVAEILARTRSPAAIATAPTA      DRGGSEDRPWTGGEGTGTFSDFAKSLRDL+QTGELDLSSEGAAG+SG GSSESPRPNLRP XXXXXXXXXXXXXXX    SSGPLDLSGSLVIGEADME
Sbjct:    3 LTRSAKAKKRRGKKKESKLAPEAKATLTTEQRVAEILARTRSPAAIATAPTAGXXXXXDRGGSEDRPWTGGEGTGTFSDFAKSLRDLRQTGELDLSSEGAAGRSGRGSSESPRPNLRPPXXXXXXXXXXXXXXXE---SSGPLDLSGSLVIGEADME 156
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1538.3113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRF2_ECTSI8.510e-18687.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN35_9PHAE4.740e-5587.90Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 488..554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1538contigE-siliculosus-1a_F_contig1538:17179..25002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1538.3113.1mRNA_E-siliculosus-1a_F_contig1538.3113.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1538 17179..25002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1538.3113.1 ID=prot_E-siliculosus-1a_F_contig1538.3113.1|Name=mRNA_E-siliculosus-1a_F_contig1538.3113.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=559bp
MDGASRLGRSSEAGGERNWRTRRGQSESPSPQSGDSDAGIGGGGSGSGGS
GGFSPLSLSLSLSDSGGAGGEPGNRYGDGRWGGHGLGGDVGGDVGGGEGG
RRGGGVGNDDGEGGRGGDIYDFDATGGSSRLTRSAEAKKRRGKMRESKLA
PKATATLTTEQRVAEILARTRSPAAIATAPTASGGGGGDRGGSEDRPWTG
GEGTGTFSDFAKSLRDLQQTGELDLSSEGAAGKSGLGSSESPRPNLRPPP
PERPPPQHHRDDDDDDDESSGPLDLSGSLVIGEADMESRRRLLRPPYGGR
ITDSPVTSSRLWDVPTAAPSLAELEYQLRKLSPLRGMAAGASKARGAGGA
GRGSRSPALKGRRGGARGGGGAGVGSGTRSGRSELRDGRFEGASSGGVSS
KTGRGQLRDRGGSRGGRVGRGGEMGGAGHGEAEQNPADLSSVVLVSSLSS
TPGRRKSGSGRWATGQGQGQGGVTQTRMGGVDLGVDDLSAAHWELTEAER
DLQRREREVDRRERSAAEAEEAASQTQREATRAREKAERELEKAKAETYA
LQVREEGC*
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