mRNA_E-siliculosus-1a_F_contig104.308.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A6H5JGE2_9PHAE (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGE2_9PHAE) HSP 1 Score: 740 bits (1910), Expect = 4.540e-262 Identity = 365/376 (97.07%), Postives = 370/376 (98.40%), Query Frame = 1 Query: 169 MDEWSTLEGLGLATAQLRSLARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWLGRLFCRLGMGSSYAPGESGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEKDWARSHAMKATTAFLKSGEYPAPGETTVITPPRLSEEERQKKMKLLLVRFCFVVVGAGLGVAGVAFAKRRGSVLAVRK 1296
MDEWSTLEGLGLATAQL SLARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWLGRLFCRLGMGSSYAP +SGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQ+WFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEK+WARSHAMKAT FLKSGEYPAPGETTVITPPRLSEE RQKKMKLLLVRFC+VV+GAGLGVAGVAF KRRGSVLAVRK
Sbjct: 1 MDEWSTLEGLGLATAQLTSLARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWLGRLFCRLGMGSSYAPVQSGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQNWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEKEWARSHAMKATITFLKSGEYPAPGETTVITPPRLSEEARQKKMKLLLVRFCYVVMGAGLGVAGVAFFKRRGSVLAVRK 376
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A835Z9M5_9STRA (Alpha/beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M5_9STRA) HSP 1 Score: 258 bits (658), Expect = 1.910e-74 Identity = 155/356 (43.54%), Postives = 196/356 (55.06%), Query Frame = 1 Query: 172 DEWSTLEGLGLATAQLRSLARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTC----------------------LAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWLGRLFCRLGMGSSYAPGESGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEKDWARSHAMKATTAFLKSGEYPAPGETTVIT----PPR 1161
EW+ +E LG+ L +LA RGSF RD GVSIE+ F AK HVLLLTGWDESFLKY +VI L+ AG VYAMD R QGLSGR DPQVTY SFDD+ D ++ S V +AHSMGGL++ AA D F RL VC+PM M+ GMP +VA L ++ C LGMG SYAPG+ + P+T KLTT++ +L R +P +A GGMS WV A++AQ WFRA +V P +L+ A D FV S F A P CR++ Y TYHE+L E+D R HA+ A + + + P P E+ + PPR
Sbjct: 5 SEWAEVEQLGIGEPGLAALAVRGSFCRD-GVSIEYSIFDTPGAKRHVLLLTGWDESFLKYAEVIRRLVDAGCAVYAMDHRGQGLSGRETEDPQVTYSASFDDYAADAEHDLDIAAQLSRTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAHSMGGLVACALAARDAARFDRLFVCAPMFHMRAGMPLWVAALLAKVGCWLGMGKSYAPGQGPISHLAPLTNKLTTNREKLEGMHISRARFPQLAKGGMSFAWVGAAVQAQTWFRANMHRVRNPTVLVHAEDDAFVFNSA-FAAFFTAAPHCRKVMYAGTYHEVLMERDAPRKHALDAMVHHI-TADAPLPPESVTVELATLPPR 357
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A7S1XLB2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLB2_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.510e-40 Identity = 129/377 (34.22%), Postives = 185/377 (49.07%), Query Frame = 1 Query: 187 LEGLGLATAQLRSLARRGSFSRDDGVSIEFCNFCQEN-AKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHL-LDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWLGRLFCRLGMGSSYAPG--ESGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEKDWARSHAMKATTAFL--KSGEYPAPGETTVITPPRLSE-EERQKKMKLLLVRFCFVVVGAGLGVAGVAFAKRRGSVLAVRK 1296
+EGL + A LA R DG + F + QE+ AK VL++ GW+E++L+Y ++ L AG +VY+ D R QG++ R+ PQVT V+SF ++ +DL V +V G +L +AHSMGGL++ AA +F R+V+ +PM +K P +V + + LG G+ +AP + +D S PI KLT D RLA E I + P GG+S W+ I+AQ F +V P LL+ A D FV T + RA + RR +P TYHE+ E R+ T F+ SGE ET + P E EE M + V G+A A G+ LAVR+
Sbjct: 17 VEGL-VGGACFEELADEEVIERPDGTELPFVSLRQESPAKIKVLIVQGWNETYLRYLPLMEVLYAAGFSVYSYDHRCQGMASRYPGAHPQVTVVDSFSEYTEDLKTVVKRVNALEPG---GELCAVAHSMGGLITCTVAADHPEIFSRIVLSAPMFSLKSVHPTWVVHAIATVLMSLGFGNKFAPDPTQHPIDASGPIIEKLTHDAPRLAELEDIWQRVPAARQGGVSVKWLKTCIEAQRRFARIWARVEAPTLLMHADEDEFVHTGQQVL-FGRANGNVRRAFFPGTYHELFNEVPAVRAACETLTVKFIGGDSGEGGDGDETDGVLMPEAGECEEFDTGMPPFYLGPILHWVSPATGIAAGALIGY-GAYLAVRR 387
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A1Y0CZZ2_9GAMM (Lysophospholipase n=2 Tax=Oceanisphaera avium TaxID=1903694 RepID=A0A1Y0CZZ2_9GAMM) HSP 1 Score: 146 bits (369), Expect = 8.140e-35 Identity = 101/314 (32.17%), Postives = 164/314 (52.23%), Query Frame = 1 Query: 193 GLGLATAQLRSLARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCG-MPHFVALWLGRLFCR----LGMGSSYAPGESGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSC-----RRLCYPTTYHEILFEKDWARSHAMKATTAF 1104
GL T + ++ + G FS DG+++ + + ++L+ G ES+LKY ++ +L G NVY D R QGL+ R L +P + YVESFDD++ DL FV QVV+E+ QL L+HSMGG ++ + + Q + SPMI + +P ++ L +F + L + YAPG+ LT + R + +P + +GG+S W+ EA+ A + A+A +++ PVL+L+AG DV V ++ C A+P+C +R+ T HE+ E+D AR A++A +F
Sbjct: 33 GLTGLTNKWQAQSVEGHFSGFDGLTLPYAKLVHARHQKAIVLVNGRTESYLKYQELALDLFHNGYNVYLYDHRGQGLAPRQLANPYLGYVESFDDYVQDLEQFVQQVVLEA---PVEQLYLLSHSMGGTVAALWLSETHVRLQAAALASPMIGIYFKPLPKWLVSALLSVFNKGCAWLDKPACYAPGQKDYQALPFKDNVLTHSELRYQLLVELYHRHPQIQLGGVSTHWLEEAMHAGEQAIAKAPRITTPVLVLQAGKDVVV-DNKAQDAFCNALPACAGGQPKRI--NTAAHELFLERDNARRPALEAVLSF 340
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: UPI001AE1BCD1 (alpha/beta hydrolase n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001AE1BCD1) HSP 1 Score: 142 bits (359), Expect = 7.120e-34 Identity = 109/309 (35.28%), Postives = 151/309 (48.87%), Query Frame = 1 Query: 211 AQLRSLARRGSFSRDDGVSIEFCNFCQ--ENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCG-MPHFVALWLGRLFCRLGMGSSYAPGESGVDVSRPI---TMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWF-RARA-KQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEKDWARSHAMKATTAFLKS 1113
A LRS G + DDG + ++ A+ VLLLTG E KY + ELL G V+A DWR+QGLS R L +PQ+ +++SFD DDL V +VV + G R L LAHSMGGL++ + A ++ +V +PM + G +P +A+WL C G YA G+ + +T+D R A + R + +GG+S WV A++A D RA +QV+ PVLLL A D V S R + +P+ YP HE+L E D R AFL S
Sbjct: 6 ADLRSDPLFGWLTLDDGTRLRTAHWPSFVTPARGTVLLLTGRSEFVEKYAETAGELLDRGFEVFAFDWRNQGLSDRPLPNPQIHHLDSFDTLADDLDAVVERVVRPAAGGRP--LVLLAHSMGGLVATLGVARHPDWYKAAIVTAPMYDIFTGPVPRPLAVWLAEQLCARGRAREYAFGQGDYKPVEGLFTPANPITSDARRYAVFHDAFRDRAELRVGGVSFGWVRAALRASDQLLRALPLEQVTTPVLLLSAPKDAIV-RSDSHRLVAARLPNATLKEYPEAKHELLMECDAIRDRVWADIDAFLAS 311
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A2P5TIT4_9GAMM (Lysophospholipase n=2 Tax=Oceanisphaera TaxID=225143 RepID=A0A2P5TIT4_9GAMM) HSP 1 Score: 140 bits (353), Expect = 9.220e-33 Identity = 102/308 (33.12%), Postives = 160/308 (51.95%), Query Frame = 1 Query: 229 ARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCG-MPHF-VALWLGRLF--CR-LGMGSSYAPGESGVDVSRPITMK-LTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRR---LCYPTTYHEILFEKDWARSHAMKATTAFLKSGEYP 1125
A +G F DG+ + + + + + ++L+ G ES+LKY ++ +L G NVY D R QGL+ R L DP + YV FDD++ DL F+ QVV+ L L+HSMGG +S + + + Q + SPM+ + G MP + V LG L C LG + YAPG+ G V P LT +AR + + R P + +GG S W+ ++++A D A+A +++ P+L+L+AG DV V +R C+A+ C HE+ E+D R A++A +F + +YP
Sbjct: 45 AEQGHFVGTDGLELPYASLSRPEHQKAIVLVNGRTESYLKYQELAFDLFNNGYNVYLYDHRGQGLAPRLLQDPLMGYVADFDDYVQDLEQFMQQVVLLE---PVDSLYLLSHSMGGTISALWLSETQVRLQAAALSSPMMGIYLGPMPRWLVDGLLGALDTGCHWLGHEACYAPGQGGGYVEVPFKDNDLTHSEARYKLFRDLYRQRPELQLGGASLHWLQQSLQAGDSAIAKAGRITTPLLVLQAGNDVVV-DNRAQNRFCQALAHCHGGAPQVIKKASHELFIERDRQRQQALEAALSFFE--QYP 346
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A1Z1SPW2_PROMI (Lysophospholipase n=30 Tax=Morganellaceae TaxID=1903414 RepID=A0A1Z1SPW2_PROMI) HSP 1 Score: 137 bits (344), Expect = 1.100e-31 Identity = 93/295 (31.53%), Postives = 148/295 (50.17%), Query Frame = 1 Query: 232 RRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWL-GRLFCRLGMGSSYAPGESGVDVSRPITMK-LTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRR--------LCYPTTYHEILFEKDWARSHAM 1086
+ G F+ DGVSI + ++ + K +++ +G ES++KY +V + G +++ +D R QGLSGR L DPQ +VE F D++DDLS F++ +V+ LAHSMGG + FQ +C+PM + +P +VA +L R + ++YA +G P + LT R + R +P + +GG + W+ E+++ DW AK+++ P+L+LEA +D V +R R C R L +HEILFE D RS A+
Sbjct: 33 QEGEFTGVDGVSIRYVHWRSSSHKKALVICSGRSESYVKYPEVAFDFYHLGYDIFLLDHRGQGLSGRLLDDPQKGHVEKFSDYVDDLSTFIDTIVLP---YHYQHYFALAHSMGGAILASYLLRKPDTFQAAALCAPMFGINLPIPRWVANFLVNRAEQSVSERNNYAVS-TGKWFPLPFILNVLTHSHERYRRYLRYYADFPQLRLGGPTYHWMKESLETGDWLIEHAKEINTPLLVLEAELDKVV-DNRGVRAFCDGYSQSRTREEKQKLPLVIEGAHHEILFEIDKLRSQAL 322
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A6L9MXV3_9ALTE (Alpha/beta fold hydrolase n=3 Tax=Alteromonas TaxID=226 RepID=A0A6L9MXV3_9ALTE) HSP 1 Score: 136 bits (343), Expect = 1.280e-31 Identity = 94/298 (31.54%), Postives = 147/298 (49.33%), Query Frame = 1 Query: 238 GSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCGMPHFVALWLGRLFCRLG----MGSSYAPGESGVDVSRPITM-KLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRRLCYPTTYHEILFEKDWARSHAMKATTAFLKSG 1116
G+F +G SI + EN + V++ +G ES+LKY + I +L Q G V+ +D R QGLS R DPQ YV+SFDD++DDL FVN +V + +L + HSMGG + + LF R V+ SPM +K +P++VA L R + S Y G++ ++ P ++ KLT K R A + + + +GG++ W+ A +A AK ++ P+L+ A D + R R + + +P+ P YHE+ E D R + +L G
Sbjct: 30 GAFKGHEGFSIRYAFCIPENPRSTVVISSGRIESYLKYKEFIFDLYQNGFAVFILDHRGQGLSDRLTHDPQHGYVDSFDDYVDDLITFVNNIVKPK---QQGELQLVCHSMGGAIGALTLLRAPTLFSRAVLASPMFGIKPALPNWVANGLIRTGLAVNRMKKQQSGYFFGQTPY-IAFPYSLNKLTHSKTRYALFRTLYDEEQDIQLGGVTTEWLCAAHEAMHKIEDSAKAITTPMLVFSADGDSIIDNKRQ-RRVVQNMPNAELEIVPRAYHELFTESDALREPTLIRLCDYLSHG 322
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: UPI00166A2EF9 (alpha/beta fold hydrolase n=1 Tax=Oceanisphaera marina TaxID=2017550 RepID=UPI00166A2EF9) HSP 1 Score: 137 bits (344), Expect = 1.400e-31 Identity = 101/326 (30.98%), Postives = 160/326 (49.08%), Query Frame = 1 Query: 172 DEWSTLEGLGLATAQLRSLARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMI-MMKCGMPHFVALWLGRLF---CR-LGMGSSYAPGESGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSC---RRLCYPTTYHEILFEKDWARSHAMKATTAFLKSGEYP 1125
E S L G GLA R A +G F DG+ + + + ++L+ G E++LKY ++ +L G NVY D R QGL+ R L D Q+ YV FDD++ DL FV Q+V++ L L+HSMGG +S + + R Q + SPM+ + +P ++ L LF CR L + YAPG++ LT + R + + P + +GG S W+ +A+ A D +A ++++P+L+L+AG DV V + C+A+ C + HE+ E+D R A++A +F +YP
Sbjct: 27 SELSDLGGSGLAAYWQRQ-AVQGQFDSHDGLKLPYAKLFNSQHQQAIILVNGRTETYLKYQELARDLFNNGYNVYLYDHRGQGLAPRLLDDTQIGYVADFDDYVQDLEQFVQQIVLQD---PVDNLYLLSHSMGGTISALWLSQTRVRLQAAALSSPMMGIYHKPLPRWLVNGLLTLFDNGCRWLNHSACYAPGQATYQDEPFKDNVLTHSEVRYQVFRDLYEQQPQLQLGGASVHWLKQALLAGDNAIHQAGRITIPLLVLQAGNDVVVDNTAQ-HTFCQALAHCDGGQPKVIKNASHELFIERDRYRRPALEAVLSFF--AQYP 345
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Match: A0A1J4QE67_9GAMM (Lysophospholipase n=2 Tax=Oceanisphaera psychrotolerans TaxID=1414654 RepID=A0A1J4QE67_9GAMM) HSP 1 Score: 136 bits (343), Expect = 1.890e-31 Identity = 94/309 (30.42%), Postives = 155/309 (50.16%), Query Frame = 1 Query: 229 ARRGSFSRDDGVSIEFCNFCQENAKHHVLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLLDPQVTYVESFDDHLDDLSFFVNQVVVESCGVRTSQLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCG-MPHFVA-----------LWLGRLFCRLGMGSSYAPGESGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQDWFRARAKQVSVPVLLLEAGVDVFVCTSRPFRELCRAVPSCRR---LCYPTTYHEILFEKDWARSHAMKATTAFLK 1110
A +G F+ DG+++ + + + ++++ G ES+LKY ++ +L G NVY D R QGL+ R L +P V YV F+D++ DL FV QVV++ L L+HSMGG +S + + R Q + SPM+ + G +P ++A WLGR C APG+ G LT + R + + R P + +GG S W+ ++++A D A+A ++++P+L+L+AG DV V +R C+ + C L HE+ E+D R A++A +F +
Sbjct: 45 AEQGRFNGADGLALPYARLSRPEHQKAIIVVNGRTESYLKYQELARDLFNNGYNVYLYDHRGQGLAPRLLQNPLVGYVADFNDYVQDLEQFVQQVVLQE---PVDSLYLLSHSMGGTISALWLSETRVRLQAAALSSPMMGIYLGPLPRWLADGLLAVLDTGCHWLGRQVC-------LAPGQGGYMEVPFADNDLTHSELRYQGFRDLYRQQPELQLGGASLHWLRQSLQAGDNAIAQAGRIAIPLLVLQAGNDVVV-DNRAQNRFCQKLAHCHGGAPLKIKGAAHELFIEQDRQRQQALEAALSFFE 342 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig104.308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig104.308.1 >prot_E-siliculosus-1a_F_contig104.308.1 ID=prot_E-siliculosus-1a_F_contig104.308.1|Name=mRNA_E-siliculosus-1a_F_contig104.308.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=377bp MDEWSTLEGLGLATAQLRSLARRGSFSRDDGVSIEFCNFCQENAKHHVLLback to top mRNA from alignment at E-siliculosus-1a_F_contig104:13573..21783- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig104.308.1 ID=mRNA_E-siliculosus-1a_F_contig104.308.1|Name=mRNA_E-siliculosus-1a_F_contig104.308.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8211bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig104:13573..21783- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig104:13573..21783- >mRNA_E-siliculosus-1a_F_contig104.308.1 ID=mRNA_E-siliculosus-1a_F_contig104.308.1|Name=mRNA_E-siliculosus-1a_F_contig104.308.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2262bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig104:13573..21783- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |