Homology
BLAST of mRNA_E-siliculosus-1a_F_contig104.307.1 vs. uniprot
Match:
D7G6G6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G6_ECTSI)
HSP 1 Score: 946 bits (2445), Expect = 0.000e+0
Identity = 531/648 (81.94%), Postives = 540/648 (83.33%), Query Frame = 0
Query: 1 MEGPVADALLKLLRYFHNPELVGSLLLLYVVHVVGFTVNIPHLFLNGLKFIVAPTEEAVLRIRSDAKGPRPEPLGQLDREGKDANAYDKMDALGLARMEVSRGTLGGLMYFPQYEGMVLWAVIALGNFVIAQGSRCAIPTQT---------------------------------------------------------------------------------------PLGWASLTLCGALLRCWWCNVRLIYLLGLNNDYSKFALLSGFCGLFAAAAVAAMLPPAFLAFDVRAAAAALHAWGGAVRGGGDAAGPPGGVSAVVSREDFLAMFLPTVSVVAACVTAAAALPAIRFSQYFSRALGRGSGATLVYRALLVADGVLPWLASLVWITEVPPLFLGERWGGGDAGGGLALRVGVTGLAAWARLAVGKLQVQAYLEGVKESVLVDLREKKVDSQAVRSKFDARLQYLVIAAAQYAAPALTVLFSLALLVHVGDAAKGGNVASGAGGRAGLGVCDAARRVVGLESWGTAFAAAAGAAEAPNSGAAVGGGEALGLGGGGLAAFVSTIPEFPEAFWSGAAGFLAWWACLSWAVTYAVGVAFWFVFPEDVSVTERVPTDRTTKGKKERVKGXXXXXXXXXXXXXXGKG 561
MEGPVADALLKLLRYFHNPELVGSLLLLYVVHVVGFTVNIPHLFLNGLKFIVAPT+EAVLRIRSDAKGPRPEPLGQLDREGKDANAYDKMDALGLARMEVSRGTLGGLMYFPQYEGMVLWAVIALGNF IAQGSRCAIPTQT PLGWASLTLCGALLRCWWCNVRLIYLLGLNNDYSKFALLSGFCGLFAAAAVAAMLPP+FLAFDVRAAAAALHAWGGAVRGG DAA PPGGVSAVVSREDFLAMFLPTV+VVAACVTAAAALPAIRFSQYFSRALGRGSGATLVYRALLV DGVLPWLASLVWI+EVPPL LGERWGGGDAG LALRVGVTGLAAWARLAVGKLQ+QAYLEGVKESVLVDLREKKVDSQ+VRSKFDARLQYLVIAAAQYAAPALTVLFSLALLVHVGDAA GG++ASG GGRAGLGVCDAARRVVGLESWGTAFAAAAGAAEAPNS GLGGGGLAAF+STIPEFPEAFWSG GFLAWWACLSWAVTYAVGVAFWFVFPEDVSVTERVPTDRTTKGKKERVKGXXXXXXXXXXXXXXGKG
Sbjct: 1 MEGPVADALLKLLRYFHNPELVGSLLLLYVVHVVGFTVNIPHLFLNGLKFIVAPTQEAVLRIRSDAKGPRPEPLGQLDREGKDANAYDKMDALGLARMEVSRGTLGGLMYFPQYEGMVLWAVIALGNFFIAQGSRCAIPTQTKCEHRGSAKKEKSPRSGAFCTANLVHSLPSAFFDALRCPPTSSFGVPIAHLDSCLLLLPQTPFTPSFSLALFDVLLLLWRDPSGGGRPLGWASLTLCGALLRCWWCNVRLIYLLGLNNDYSKFALLSGFCGLFAAAAVAAMLPPSFLAFDVRAAAAALHAWGGAVRGGSDAAVPPGGVSAVVSREDFLAMFLPTVAVVAACVTAAAALPAIRFSQYFSRALGRGSGATLVYRALLVVDGVLPWLASLVWISEVPPLVLGERWGGGDAGRALALRVGVTGLAAWARLAVGKLQLQAYLEGVKESVLVDLREKKVDSQSVRSKFDARLQYLVIAAAQYAAPALTVLFSLALLVHVGDAATGGDLASGTGGRAGLGVCDAARRVVGLESWGTAFAAAAGAAEAPNSXXXXXXXXXXGLGGGGLAAFISTIPEFPEAFWSGVTGFLAWWACLSWAVTYAVGVAFWFVFPEDVSVTERVPTDRTTKGKKERVKGXXXXXXXXXXXXXXGKG 648
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig104.307.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 1
M E G P V A D A L L K L L R Y F H N P E L V G S L L L L Y V V H V V G F T V N I P H L F L N G L K F I V A P T E E A V L R I R S D A K G P R P E P L G Q L D R E G K D A N A Y D K M D A L G L A R M E V S R G T L G G L M Y F P Q Y E G M V L W A V I A L G N F V I A Q G S R C A I P T Q T P L G W A S L T L C G A L L R C W W C N V R L I Y L L G L N N D Y S K F A L L S G F C G L F A A A A V A A M L P P A F L A F D V R A A A A A L H A W G G A V R G G G D A A G P P G G V S A V V S R E D F L A M F L P T V S V V A A C V T A A A A L P A I R F S Q Y F S R A L G R G S G A T L V Y R A L L V A D G V L P W L A S L V W I T E V P P L F L G E R W G G G D A G G G L A L R V G V T G L A A W A R L A V G K L Q V Q A Y L E G V K E S V L V D L R E K K V D S Q A V R S K F D A R L Q Y L V I A A A Q Y A A P A L T V L F S L A L L V H V G D A A K G G N V A S G A G G R A G L G V C D A A R R V V G L E S W G T A F A A A A G A A E A P N S G A A V G G G E A L G L G G G G L A A F V S T I P E F P E A F W S G A A G F L A W W A C L S W A V T Y A V G V A F W F V F P E D V S V T E R V P T D R T T K G K K E R V K G K A K A K G G G K G A G A G G K G * 50 100 150 200 250 300 350 400 450 500 550 Expect = 0.00e+0 / Id = 81.94 Sequence D7G6G6_ECTSI
Match Name E-value Identity Description
D7G6G6_ECTSI 0.000e+0 81.94 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M E G P V A D A L L K L L R Y F H N P E L V G S L L L L Y V V H V V G F T V N I P H L F L N G L K F I V A P T E E A V L R I R S D A K G P R P E P L G Q L D R E G K D A N A Y D K M D A L G L A R M E V S R G T L G G L M Y F P Q Y E G M V L W A V I A L G N F V I A Q G S R C A I P T Q T P L G W A S L T L C G A L L R C W W C N V R L I Y L L G L N N D Y S K F A L L S G F C G L F A A A A V A A M L P P A F L A F D V R A A A A A L H A W G G A V R G G G D A A G P P G G V S A V V S R E D F L A M F L P T V S V V A A C V T A A A A L P A I R F S Q Y F S R A L G R G S G A T L V Y R A L L V A D G V L P W L A S L V W I T E V P P L F L G E R W G G G D A G G G L A L R V G V T G L A A W A R L A V G K L Q V Q A Y L E G V K E S V L V D L R E K K V D S Q A V R S K F D A R L Q Y L V I A A A Q Y A A P A L T V L F S L A L L V H V G D A A K G G N V A S G A G G R A G L G V C D A A R R V V G L E S W G T A F A A A A G A A E A P N S G A A V G G G E A L G L G G G G L A A F V S T I P E F P E A F W S G A A G F L A W W A C L S W A V T Y A V G V A F W F V F P E D V S V T E R V P T D R T T K G K K E R V K G K A K A K G G G K G A G A G G K G * 50 100 150 200 250 300 350 400 450 500 550 Expect = 1.5E-13 / Score = 50.2 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence PF10268 PTHR13624 PTHR13624:SF6 TRANSMEMBRANE TRANSMEMBRANE TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix TMhelix TMhelix TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
IPR019395 Transmembrane protein 161A/B PFAM PF10268 Tmemb_161AB coord: 43..515 IPR019395 Transmembrane protein 161A/B PANTHER PTHR13624 FAMILY NOT NAMED coord: 24..519 None No IPR available PANTHER PTHR13624:SF6 DBJ|BAA83359.1 coord: 24..519 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 242..263 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 497..519 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 284..306 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 41..116 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 520..561 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 167..177 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 344..382 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 117..134 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 383..406 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..20 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 178..197 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 198..241 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 21..40 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 307..325 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 407..496 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 264..283 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 326..343 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 146..166 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 135..145 None No IPR available TMHMM TMhelix coord: 242..264 None No IPR available TMHMM TMhelix coord: 21..43 None No IPR available TMHMM TMhelix coord: 109..131 None No IPR available TMHMM TMhelix coord: 284..306 None No IPR available TMHMM TMhelix coord: 180..202 None No IPR available TMHMM TMhelix coord: 326..343 None No IPR available TMHMM TMhelix coord: 384..406 None No IPR available TMHMM TMhelix coord: 497..519
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig104.307.1 ID=prot_E-siliculosus-1a_F_contig104.307.1|Name=mRNA_E-siliculosus-1a_F_contig104.307.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=562bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR019395 Transmembrane_161A/B