mRNA_E-siliculosus-1a_F_contig15267.3047.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15267.3047.1
Unique NamemRNA_E-siliculosus-1a_F_contig15267.3047.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A0D5M301_9GAMM (Energy-dependent translational throttle protein EttA n=117 Tax=root TaxID=1 RepID=A0A0D5M301_9GAMM)

HSP 1 Score: 617 bits (1592), Expect = 3.310e-219
Identity = 314/330 (95.15%), Postives = 323/330 (97.88%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+AKVG LSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAI+QELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIEF +V KRFD+KLLYQ+LSFTIP GAIVGIVGGNGAGKSTLF+LI GKEQPDAGEVV+GETVDIAYVEQLRD LD+KQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALE+
Sbjct:  156 WDAKVGNLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIRQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIEFHNVTKRFDDKLLYQDLSFTIPPGAIVGIVGGNGAGKSTLFQLITGKEQPDAGEVVIGETVDIAYVEQLRDALDNKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALED 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A368U824_9GAMM (Energy-dependent translational throttle protein EttA n=2 Tax=Halomonas TaxID=2745 RepID=A0A368U824_9GAMM)

HSP 1 Score: 598 bits (1541), Expect = 2.560e-211
Identity = 302/330 (91.52%), Postives = 317/330 (96.06%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+AKVGTLSGGERRRVALCRLLLSSPDMLL+DEPTNHLDAESVAWLER+LHDY+GTVVAITHDRYFLDNVAGWILELDRGQG+PFEGNYS WLE K+QRL QEAKQEASRQKAI+QELEWVRSN KGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIEF +V KRFD+KLLY++LSF+IP GAIVGIVGGNGAGKSTLFKLI G+EQPDAGEVVVG+TV IAYVEQLRD LDDKQTVWEAVSDGQD+LNINGYEV SRAYVGRFNFKGNDQQKRL ELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:  165 WDAKVGTLSGGERRRVALCRLLLSSPDMLLIDEPTNHLDAESVAWLERYLHDYSGTVVAITHDRYFLDNVAGWILELDRGQGLPFEGNYSNWLETKEQRLGQEAKQEASRQKAIRQELEWVRSNTKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIEFHNVTKRFDDKLLYEDLSFSIPPGAIVGIVGGNGAGKSTLFKLITGQEQPDAGEVVVGDTVKIAYVEQLRDALDDKQTVWEAVSDGQDLLNINGYEVPSRAYVGRFNFKGNDQQKRLDELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 494          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A109UL09_9GAMM (Energy-dependent translational throttle protein EttA n=136 Tax=Proteobacteria TaxID=1224 RepID=A0A109UL09_9GAMM)

HSP 1 Score: 597 bits (1538), Expect = 5.350e-211
Identity = 302/330 (91.52%), Postives = 317/330 (96.06%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+A+VG LSGGERRRVALCRLLLS+PDMLLLDEPTNHLDAESVAWLERFLHDY+GTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLE K++RL QEAKQEASRQKAIK ELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIEF  V+KRFD+KLLY++LSFT+P GAIVGIVGGNGAGKSTLFKLI GKEQPD GEVVVG+TV+IAYVEQLRD LDDKQTVWEAVSDGQD+LNINGYEVSSRAYVGRFNFKGNDQQK L +LSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WDARVGNLSGGERRRVALCRLLLSNPDMLLLDEPTNHLDAESVAWLERFLHDYSGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLESKEKRLEQEAKQEASRQKAIKHELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIEFHGVSKRFDDKLLYEDLSFTVPKGAIVGIVGGNGAGKSTLFKLIDGKEQPDGGEVVVGDTVEIAYVEQLRDALDDKQTVWEAVSDGQDMLNINGYEVSSRAYVGRFNFKGNDQQKFLKDLSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A847BJ70_9GAMM (Energy-dependent translational throttle protein EttA n=1 Tax=Halomonadaceae bacterium TaxID=2026746 RepID=A0A847BJ70_9GAMM)

HSP 1 Score: 587 bits (1513), Expect = 2.240e-209
Identity = 298/329 (90.58%), Postives = 314/329 (95.44%), Query Frame = 1
Query:    4 EAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            +A V TLSGGERRRVALCRLLLS+PDMLLLDEPTNHLDAESVAWLERFLHDY GTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLE K+QRL QEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIEF  V+KRFD+KLLY+ LSF++P GAIVGI+GGNGAGKSTLF+LI GKEQPD+G+VV+GETVDIAYVEQLRD L+D QTVWEAVSDGQD+LNINGYEVSSRAYVGRFNFKGNDQQK L +LSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:   16 DADVTTLSGGERRRVALCRLLLSNPDMLLLDEPTNHLDAESVAWLERFLHDYPGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLESKEQRLAQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIEFHGVSKRFDDKLLYEELSFSVPQGAIVGIIGGNGAGKSTLFRLITGKEQPDSGDVVIGETVDIAYVEQLRDALEDTQTVWEAVSDGQDMLNINGYEVSSRAYVGRFNFKGNDQQKFLKDLSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 344          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A1Q8SNW8_9GAMM (Energy-dependent translational throttle protein EttA n=2 Tax=Salinicola TaxID=404432 RepID=A0A1Q8SNW8_9GAMM)

HSP 1 Score: 583 bits (1504), Expect = 7.860e-206
Identity = 296/330 (89.70%), Postives = 311/330 (94.24%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            WEA VG LSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDY GTVVAITHDRYFLDNVAGWILELDRG GIPFEGNYSQWLE K+QRL QE+KQEA RQ+AIKQELEWVR NAKGRQAKSKARLNRFEE+QSGD+QKRNETNEIYIPPGPRLGD VIEF+DV+KRFDEK+L+ NLSF +P GAIVGIVGGNGAGKSTLFKLIAG EQPD+GEVV+GETVD+AYVEQLRD  D+ QTVWEAVS GQDILNINGYEVSSRAYVGRFNFKG DQQKRLS+LSGGERGRLQLAQTLKQ ANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WEASVGHLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYPGTVVAITHDRYFLDNVAGWILELDRGHGIPFEGNYSQWLESKEQRLAQESKQEAGRQRAIKQELEWVRQNAKGRQAKSKARLNRFEELQSGDYQKRNETNEIYIPPGPRLGDKVIEFQDVSKRFDEKMLFDNLSFRVPPGAIVGIVGGNGAGKSTLFKLIAGNEQPDSGEVVLGETVDVAYVEQLRDHFDNTQTVWEAVSGGQDILNINGYEVSSRAYVGRFNFKGTDQQKRLSDLSGGERGRLQLAQTLKQAANVLLLDEPSNDLDIETLRALEE 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A1M7FLY8_9GAMM (Energy-dependent translational throttle protein EttA n=1 Tax=Halomonas subglaciescola TaxID=29571 RepID=A0A1M7FLY8_9GAMM)

HSP 1 Score: 581 bits (1498), Expect = 6.410e-205
Identity = 295/330 (89.39%), Postives = 312/330 (94.55%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+A VG LSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDY+GTVVAITHDRYFLDNVAGWILELDRG+GIPFEGNYS WLEQKD RL  EAKQEASRQKAIK+ELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIEF +VAKRFD+KLLY++LSF IP GAIVGIVGGNGAGKST+FKLI G + PDAG+V++G+TV+IAYVEQLRD ++DKQTVWEAVS GQD LNINGY VSSRAYVGRFNFKGNDQQKRL ELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WDAIVGNLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYSGTVVAITHDRYFLDNVAGWILELDRGEGIPFEGNYSHWLEQKDARLAGEAKQEASRQKAIKKELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIEFHNVAKRFDDKLLYEDLSFAIPPGAIVGIVGGNGAGKSTMFKLINGDDTPDAGDVIIGDTVEIAYVEQLRDNMEDKQTVWEAVSGGQDSLNINGYTVSSRAYVGRFNFKGNDQQKRLDELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A1M4SYW9_9GAMM (Energy-dependent translational throttle protein EttA n=4 Tax=Halomonas TaxID=2745 RepID=A0A1M4SYW9_9GAMM)

HSP 1 Score: 580 bits (1495), Expect = 1.830e-204
Identity = 291/330 (88.18%), Postives = 313/330 (94.85%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            WEA VG LSGGERRRVALCRLLLS+PDMLLLDEPTNHLDAESVAWLERFLHDY+GTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYS WLE K++RL QEAKQEASRQKAIK+EL+WVR N KGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIE  DV+KR+ +KLL+++LSF +P GAIVGI+GGNGAGKS+LF++I G EQPD GE+V+GETV+IAYVEQLRD LD+KQTVWEAVS+GQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WEANVGVLSGGERRRVALCRLLLSNPDMLLLDEPTNHLDAESVAWLERFLHDYSGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSDWLEAKEKRLAQEAKQEASRQKAIKEELDWVRQNPKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIELHDVSKRYGDKLLFEHLSFQVPKGAIVGIIGGNGAGKSSLFRMINGTEQPDEGEIVIGETVEIAYVEQLRDALDNKQTVWEAVSEGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A0N8HJF8_9GAMM (Energy-dependent translational throttle protein EttA n=15 Tax=Bacteria TaxID=2 RepID=A0A0N8HJF8_9GAMM)

HSP 1 Score: 579 bits (1493), Expect = 3.690e-204
Identity = 293/330 (88.79%), Postives = 309/330 (93.64%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+A VG LSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDY+GTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYS WLEQKD RL QEAKQEASR KAI+QELEWVR N KGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGD VIE  +V KRFD+KLL+ +LSFTIP GAIVGIVGGNGAGKSTLFKL+ GK+ PD+GEVV+GETV +AYVEQLRDGL+D QTVWEAVS GQD+LNING+EVSSRAYVGRFNFKG DQQKRLS+LSGGERGRLQLAQTLKQ ANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WDANVGVLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYSGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSSWLEQKDARLQQEAKQEASRNKAIQQELEWVRQNPKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDKVIELHNVTKRFDDKLLFDDLSFTIPQGAIVGIVGGNGAGKSTLFKLVTGKDTPDSGEVVLGETVKVAYVEQLRDGLEDNQTVWEAVSGGQDMLNINGHEVSSRAYVGRFNFKGTDQQKRLSDLSGGERGRLQLAQTLKQAANVLLLDEPSNDLDIETLRALEE 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A172YID1_9GAMM (Energy-dependent translational throttle protein EttA n=4 Tax=Halomonadaceae TaxID=28256 RepID=A0A172YID1_9GAMM)

HSP 1 Score: 557 bits (1436), Expect = 1.680e-195
Identity = 281/330 (85.15%), Postives = 304/330 (92.12%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+A++  LSGGERRRVALCRLLLS+PDMLLLDEPTNHLDAESV WLERFL +Y GTVVA+THDRYFLDN AGWILELDRG+GIPFEGNYS WLE K++RL QEAKQEASRQKAIKQELEWVR   KGRQAKSKARL+RFEEMQS DFQKRNETNEIYIPPGPRLGD VIEF  V KRF++K+L+++LSFTIP GAIVGI+GGNGAGKSTLFKL+ GKEQPDAGEVV+G+TV IAYVEQLRD LDD QTVW+AVSDGQD+LNINGYE SSRAYVGRFNFKG DQQK L +LSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WDARIEHLSGGERRRVALCRLLLSNPDMLLLDEPTNHLDAESVGWLERFLVEYPGTVVAVTHDRYFLDNAAGWILELDRGRGIPFEGNYSDWLEAKEKRLEQEAKQEASRQKAIKQELEWVRQGQKGRQAKSKARLSRFEEMQSSDFQKRNETNEIYIPPGPRLGDKVIEFHGVTKRFEDKVLFEDLSFTIPTGAIVGIIGGNGAGKSTLFKLVTGKEQPDAGEVVLGDTVKIAYVEQLRDHLDDSQTVWQAVSDGQDVLNINGYETSSRAYVGRFNFKGTDQQKFLCDLSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 485          
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Match: A0A2Z2H9R7_9GAMM (Energy-dependent translational throttle protein EttA n=7 Tax=Kushneria TaxID=504090 RepID=A0A2Z2H9R7_9GAMM)

HSP 1 Score: 553 bits (1424), Expect = 1.120e-193
Identity = 276/330 (83.64%), Postives = 306/330 (92.73%), Query Frame = 1
Query:    1 WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFLHDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRLNQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKRNETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIVGGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVWEAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 990
            W+A+V  LSGGERRRVALCRLLLS PDMLLLDEPTNHLDAESV WLERFL ++NGTVVA+THDRYFLDN AGWILELDRG+GIP+EGNYS WLE K++RL QEAKQEASRQKAIKQELEWVR N KGRQAKSKARLNRF+E+QSGDFQKRNETNEIYIPPGPRLGD VIE  +V KRF +K+L ++L+ ++P GAIVGIVGGNGAGKSTLF++I G+EQPD+GEVV+G+TVDIAYVEQLRD +DD+QTVWEAVS GQD+L+INGYEVSSRAYVGRFNFKGNDQQK L +LSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE
Sbjct:  156 WDARVEHLSGGERRRVALCRLLLSGPDMLLLDEPTNHLDAESVGWLERFLTEFNGTVVAVTHDRYFLDNAAGWILELDRGRGIPWEGNYSTWLEAKEKRLEQEAKQEASRQKAIKQELEWVRQNPKGRQAKSKARLNRFDELQSGDFQKRNETNEIYIPPGPRLGDKVIELHNVTKRFGDKMLIEDLTMSVPPGAIVGIVGGNGAGKSTLFRMITGQEQPDSGEVVIGDTVDIAYVEQLRDAMDDRQTVWEAVSGGQDMLSINGYEVSSRAYVGRFNFKGNDQQKYLKDLSGGERGRLQLAQTLKQGANVLLLDEPSNDLDIETLRALEE 485          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15267.3047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5M301_9GAMM3.310e-21995.15Energy-dependent translational throttle protein Et... [more]
A0A368U824_9GAMM2.560e-21191.52Energy-dependent translational throttle protein Et... [more]
A0A109UL09_9GAMM5.350e-21191.52Energy-dependent translational throttle protein Et... [more]
A0A847BJ70_9GAMM2.240e-20990.58Energy-dependent translational throttle protein Et... [more]
A0A1Q8SNW8_9GAMM7.860e-20689.70Energy-dependent translational throttle protein Et... [more]
A0A1M7FLY8_9GAMM6.410e-20589.39Energy-dependent translational throttle protein Et... [more]
A0A1M4SYW9_9GAMM1.830e-20488.18Energy-dependent translational throttle protein Et... [more]
A0A0N8HJF8_9GAMM3.690e-20488.79Energy-dependent translational throttle protein Et... [more]
A0A172YID1_9GAMM1.680e-19585.15Energy-dependent translational throttle protein Et... [more]
A0A2Z2H9R7_9GAMM1.120e-19383.64Energy-dependent translational throttle protein Et... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15267contigE-siliculosus-1a_F_contig15267:1..990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size990
Model size990
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EggNOG OGs1MU37@1224,1RPWS@1236,1XH7E@135619,COG0488@1,COG0488@2
EggNOG free text desc.ABC transporter ATP-binding protein
Preferred nameyjjK
Seed eggNOG ortholog1415755.JQLV01000002_gene142
Seed ortholog evalue4.1e-181
Seed ortholog score640.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928037.0131192-CDS-E-siliculosus-1a_F_contig15267:0..9901622928037.0131192-CDS-E-siliculosus-1a_F_contig15267:0..990Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15267 1..990 -
1696318782.2404625-CDS-E-siliculosus-1a_F_contig15267:0..9901696318782.2404625-CDS-E-siliculosus-1a_F_contig15267:0..990Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15267 1..990 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15267.3047.1prot_E-siliculosus-1a_F_contig15267.3047.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15267 1..990 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15267.3047.1

>prot_E-siliculosus-1a_F_contig15267.3047.1 ID=prot_E-siliculosus-1a_F_contig15267.3047.1|Name=mRNA_E-siliculosus-1a_F_contig15267.3047.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=330bp
WEAKVGTLSGGERRRVALCRLLLSSPDMLLLDEPTNHLDAESVAWLERFL
HDYNGTVVAITHDRYFLDNVAGWILELDRGQGIPFEGNYSQWLEQKDQRL
NQEAKQEASRQKAIKQELEWVRSNAKGRQAKSKARLNRFEEMQSGDFQKR
NETNEIYIPPGPRLGDNVIEFRDVAKRFDEKLLYQNLSFTIPHGAIVGIV
GGNGAGKSTLFKLIAGKEQPDAGEVVVGETVDIAYVEQLRDGLDDKQTVW
EAVSDGQDILNINGYEVSSRAYVGRFNFKGNDQQKRLSELSGGERGRLQL
AQTLKQGANVLLLDEPSNDLDIETLRALEE
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mRNA from alignment at E-siliculosus-1a_F_contig15267:1..990-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15267.3047.1 ID=mRNA_E-siliculosus-1a_F_contig15267.3047.1|Name=mRNA_E-siliculosus-1a_F_contig15267.3047.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=990bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15267:1..990- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGAAGCAAAAGTAGGCACTCTTTCGGGTGGTGAACGCCGCCGAGTTGC CCTATGCCGCCTATTGCTCTCTAGCCCCGATATGCTGTTACTGGATGAGC CTACCAACCACCTCGATGCAGAATCGGTGGCTTGGCTTGAGCGCTTCTTG CATGATTATAACGGCACGGTGGTGGCGATCACCCACGACCGCTACTTCCT GGATAACGTGGCCGGCTGGATATTGGAACTTGACCGTGGTCAAGGTATTC CATTTGAGGGTAACTACTCTCAGTGGCTAGAGCAGAAAGACCAACGTTTA AACCAAGAGGCCAAACAGGAAGCGTCGCGTCAGAAAGCCATCAAGCAGGA GCTTGAGTGGGTGCGCAGCAACGCCAAGGGGCGCCAAGCGAAAAGTAAAG CGCGCCTTAATCGCTTTGAAGAGATGCAGTCAGGCGATTTCCAAAAGCGT AATGAAACCAATGAAATTTATATTCCACCGGGACCACGCCTAGGCGACAA CGTTATTGAATTTCGTGATGTCGCTAAGCGCTTTGATGAGAAGTTACTTT ATCAAAACCTTTCATTCACTATTCCTCACGGTGCGATTGTGGGTATTGTC GGTGGTAACGGTGCTGGCAAATCAACCCTATTCAAACTGATCGCAGGTAA AGAGCAGCCGGATGCAGGTGAAGTCGTGGTTGGCGAGACGGTAGATATCG CTTACGTTGAGCAGCTACGCGATGGACTGGACGACAAGCAAACCGTGTGG GAAGCCGTTTCGGATGGACAGGACATCCTGAACATTAATGGCTATGAGGT CTCATCTCGCGCTTATGTTGGACGCTTTAACTTTAAGGGCAACGACCAAC AGAAGCGTTTATCGGAACTCTCAGGCGGTGAGCGCGGTCGCTTGCAACTT GCCCAAACGCTTAAGCAAGGGGCTAACGTTCTCCTCCTTGATGAGCCATC CAACGACCTGGATATTGAAACCTTACGTGCATTGGAAGAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15267:1..990-

>mRNA_E-siliculosus-1a_F_contig15267.3047.1 ID=mRNA_E-siliculosus-1a_F_contig15267.3047.1|Name=mRNA_E-siliculosus-1a_F_contig15267.3047.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1980bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15267:1..990- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGAAGCAAAAGTAGGCACTCTTTCGGGTGGTGAACGCCGCCGAGTTGC
CCTATGCCGCCTATTGCTCTCTAGCCCCGATATGCTGTTACTGGATGAGC
CTACCAACCACCTCGATGCAGAATCGGTGGCTTGGCTTGAGCGCTTCTTG
CATGATTATAACGGCACGGTGGTGGCGATCACCCACGACCGCTACTTCCT
GGATAACGTGGCCGGCTGGATATTGGAACTTGACCGTGGTCAAGGTATTC
CATTTGAGGGTAACTACTCTCAGTGGCTAGAGCAGAAAGACCAACGTTTA
AACCAAGAGGCCAAACAGGAAGCGTCGCGTCAGAAAGCCATCAAGCAGGA
GCTTGAGTGGGTGCGCAGCAACGCCAAGGGGCGCCAAGCGAAAAGTAAAG
CGCGCCTTAATCGCTTTGAAGAGATGCAGTCAGGCGATTTCCAAAAGCGT
AATGAAACCAATGAAATTTATATTCCACCGGGACCACGCCTAGGCGACAA
CGTTATTGAATTTCGTGATGTCGCTAAGCGCTTTGATGAGAAGTTACTTT
ATCAAAACCTTTCATTCACTATTCCTCACGGTGCGATTGTGGGTATTGTC
GGTGGTAACGGTGCTGGCAAATCAACCCTATTCAAACTGATCGCAGGTAA
AGAGCAGCCGGATGCAGGTGAAGTCGTGGTTGGCGAGACGGTAGATATCG
CTTACGTTGAGCAGCTACGCGATGGACTGGACGACAAGCAAACCGTGTGG
GAAGCCGTTTCGGATGGACAGGACATCCTGAACATTAATGGCTATGAGGT
CTCATCTCGCGCTTATGTTGGACGCTTTAACTTTAAGGGCAACGACCAAC
AGAAGCGTTTATCGGAACTCTCAGGCGGTGAGCGCGGTCGCTTGCAACTT
GCCCAAACGCTTAAGCAAGGGGCTAACGTTCTCCTCCTTGATGAGCCATC
CAACGACCTGGATATTGAAACCTTACGTGCATTGGAAGAATGGGAAGCAA
AAGTAGGCACTCTTTCGGGTGGTGAACGCCGCCGAGTTGCCCTATGCCGC
CTATTGCTCTCTAGCCCCGATATGCTGTTACTGGATGAGCCTACCAACCA
CCTCGATGCAGAATCGGTGGCTTGGCTTGAGCGCTTCTTGCATGATTATA
ACGGCACGGTGGTGGCGATCACCCACGACCGCTACTTCCTGGATAACGTG
GCCGGCTGGATATTGGAACTTGACCGTGGTCAAGGTATTCCATTTGAGGG
TAACTACTCTCAGTGGCTAGAGCAGAAAGACCAACGTTTAAACCAAGAGG
CCAAACAGGAAGCGTCGCGTCAGAAAGCCATCAAGCAGGAGCTTGAGTGG
GTGCGCAGCAACGCCAAGGGGCGCCAAGCGAAAAGTAAAGCGCGCCTTAA
TCGCTTTGAAGAGATGCAGTCAGGCGATTTCCAAAAGCGTAATGAAACCA
ATGAAATTTATATTCCACCGGGACCACGCCTAGGCGACAACGTTATTGAA
TTTCGTGATGTCGCTAAGCGCTTTGATGAGAAGTTACTTTATCAAAACCT
TTCATTCACTATTCCTCACGGTGCGATTGTGGGTATTGTCGGTGGTAACG
GTGCTGGCAAATCAACCCTATTCAAACTGATCGCAGGTAAAGAGCAGCCG
GATGCAGGTGAAGTCGTGGTTGGCGAGACGGTAGATATCGCTTACGTTGA
GCAGCTACGCGATGGACTGGACGACAAGCAAACCGTGTGGGAAGCCGTTT
CGGATGGACAGGACATCCTGAACATTAATGGCTATGAGGTCTCATCTCGC
GCTTATGTTGGACGCTTTAACTTTAAGGGCAACGACCAACAGAAGCGTTT
ATCGGAACTCTCAGGCGGTGAGCGCGGTCGCTTGCAACTTGCCCAAACGC
TTAAGCAAGGGGCTAACGTTCTCCTCCTTGATGAGCCATCCAACGACCTG
GATATTGAAACCTTACGTGCATTGGAAGAA
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