mRNA_E-siliculosus-1a_F_contig1039.302.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1039.302.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1039.302.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A6H5KUV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV6_9PHAE)

HSP 1 Score: 547 bits (1409), Expect = 3.620e-192
Identity = 330/412 (80.10%), Postives = 339/412 (82.28%), Query Frame = 1

Query:    7 MVVRATRVLVGRCRQISASRCAGQRQRHSRNYYGDAPVRLSAARCLATVAAAPLPRPQPTSSLSCPARPHSXXXXXXXXXXXXXXXXNYTKIRSPXXXXXXXXXXXXXXX---SKTPAVAASRRALRVCSSSPSQFRQRQMRQEHYKTDARSTGQGGKVDDGGGVRQGEGDRSSRDGERFEEEEEEGAASMIEKESDRVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRENLQERYREREVLVR 1233
            MVVRATRVLVGRCRQ+SA RCAGQRQRHSRNYYG+ PVRLSAARCLATVAAAP   PQPTSSLS PARPHS                N TKIRS XXXXXXXXXXXXXXX   SKTPA++ASRRALR                                        GEGDRSSRDGERFEEE E+G  SMI+KESDRVWTVPN+ITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVP ALVALMVGRDALL+ GSIAYRFKTRREGD FFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQR+NLQERYREREVLVR
Sbjct:    1 MVVRATRVLVGRCRQMSA-RCAGQRQRHSRNYYGEVPVRLSAARCLATVAAAP---PQPTSSLSFPARPHSSSTACRRRSGAAS---NSTKIRSXXXXXXXXXXXXXXXXXXXSKTPAISASRRALR----------------------------------------GEGDRSSRDGERFEEEGEKGVGSMIKKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPAALVALMVGRDALLITGSIAYRFKTRREGDDFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRQNLQERYREREVLVR 365

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: D7FT37_ECTSI (CDP-alcohol phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT37_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.410e-144
Identity = 217/222 (97.75%), Postives = 220/222 (99.10%), Query Frame = 1

Query:  568 MIEKESDRVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRENLQERYREREVLVR 1233
            M+EKESDRVWTVPN+ITMGRIAFCPVLA LIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVP ALVALMVGRDALL+AGSIAYRFKTRREGDAFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRENLQERYREREVLVR
Sbjct:    1 MVEKESDRVWTVPNMITMGRIAFCPVLASLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPTALVALMVGRDALLIAGSIAYRFKTRREGDAFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRENLQERYREREVLVR 222

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A4D9CZ77_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ77_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.600e-45
Identity = 89/189 (47.09%), Postives = 124/189 (65.61%), Query Frame = 1

Query:  592 VWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDLDS-LDYKVTPSTLSKVNTVLQFGTLWLGLTNSVY--LVPG--DAVFSALCVGTGVATLASGVNYLLVSG 1143
            +WTVPNIIT+ RI   P+LAGLI+  ++  A+ GL  A+ +DWLDG+IA+ + Q+SVLG FLDPLADKV+V  +A+ L  QG++P  L+ +++GRDALL+ GS   R + R  G  FFD  S   +++TP+ LSK+NT LQF  L   L  +++   +P   D VF  LC  TG  T+ SG+ YL   G
Sbjct:    1 MWTVPNIITLARILSSPLLAGLILQGRYSYAVMGLAVAAGSDWLDGHIAKNYNQSSVLGSFLDPLADKVLVAALAVPLAFQGLIPTPLLVVVLGRDALLIGGSFIKRLQNRPAGAPFFDTSSSATFQITPNLLSKINTTLQFTVLTFALCRALWGDAIPAAVDEVFEPLCWLTGGTTVGSGLTYLAGDG 189

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A8K1CPA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPA2_PYTOL)

HSP 1 Score: 164 bits (415), Expect = 9.530e-44
Identity = 89/182 (48.90%), Postives = 117/182 (64.29%), Query Frame = 1

Query:  589 RVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDL-DSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYL 1131
            +V  VPN+IT  RI   P L  LI +  +  A+  L AA L+DWLDGYIARK+KQ S++G FLDP ADK+MV T++L++   G++P  LV L+ GRD LLV+G+  +R KT+    AFFD  DS  ++V P+ LSKVNT LQF T  L LTN+ + +PGD   + L    G  T  SG  YL
Sbjct:   97 QVVNVPNVITFARIVATPYLGYLIYSGSYASAVGVLAAAGLSDWLDGYIARKFKQESIIGSFLDPFADKLMVGTLSLSMLSSGLLPWPLVVLVFGRDFLLVSGTFYHRLKTKAADSAFFDTSDSGAFQVAPTMLSKVNTALQFSTFGLALTNAAWQIPGDLALNTLFGVVGTTTFLSGAEYL 278

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: W7TR40_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR40_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.050e-43
Identity = 89/191 (46.60%), Postives = 124/191 (64.92%), Query Frame = 1

Query:  586 DRVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDL-DSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVY--LVPG--DAVFSALCVGTGVATLASGVNYLLVSG 1143
            + +WTVPNIIT+ RI   P+LAGLI+  ++  A+ GL  A+ +DWLDG+IA+ + Q+SVLG FLDPLADKV+V  +A+ L  QG +P  L+ +++GRDALL+ GS   R + R  G  FFD   S  +++TP+ LSK+NT LQF  L   L  +++   +P   D VF  LC  TG  T+ SG+ YL   G
Sbjct:  129 ETMWTVPNIITLARIISSPLLAGLILQGRYSYAVMGLAVAAGSDWLDGHIAKNYNQSSVLGSFLDPLADKVLVAALAVPLALQGFIPTPLLVVVLGRDALLIGGSFIKRLQNRPVGAPFFDTASSATFQITPNLLSKINTTLQFIVLTFALCRALWGDAIPAAVDEVFEPLCWLTGGTTVGSGLTYLAGDG 319

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A1V9ZN07_9STRA (Cardiolipin synthetase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN07_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.020e-42
Identity = 85/182 (46.70%), Postives = 116/182 (63.74%), Query Frame = 1

Query:  589 RVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDLDSL-DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYL 1131
            +V TVPN IT  RI   P L  LIV+  +  A+  L AA L+DWLDGY+ARK KQ +++G FLDPLADKVMV T+ +++G  G++P  LV ++ GRD LL+ G++ +R+ T+     FF  D L  ++V PS LSK NT LQF TL   L N+ + VPGD   + +     ++T ASG  YL
Sbjct:   41 KVVTVPNAITFTRILSTPYLGYLIVSGSYPAAVGVLGAAGLSDWLDGYLARKLKQKTIVGTFLDPLADKVMVGTLCVSMGYTGLLPLPLVIVIFGRDLLLIGGTLYHRYHTKTSNSDFFQTDDLTSFEVNPSLLSKANTALQFATLGGALLNAAFQVPGDLALNVMFGSVAISTFASGSMYL 222

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A067CS69_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CS69_SAPPC)

HSP 1 Score: 154 bits (389), Expect = 2.030e-40
Identity = 84/189 (44.44%), Postives = 119/189 (62.96%), Query Frame = 1

Query:  574 EKESD--RVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDLDSL-DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYL 1131
            EK +D  +V T+PN IT  RI   P L  LIV+  +  A+  L AA  +DWLDGY+ARK  Q +++G FLDPLADKVMV T+ +++G  G++P  L+ ++ GRD LL+ G++ +R+ T+    AFF  D L  ++V PS LSK NT LQF TL   L N+ + +PGD   + +     ++T ASG  YL
Sbjct:   54 EKANDPHQVVTLPNAITFTRILSTPYLGYLIVSGSYPAAIGVLGAAGFSDWLDGYLARKLNQKTIVGTFLDPLADKVMVGTLCVSMGYAGLLPLPLIVVIFGRDLLLIGGTLYHRYHTKTNSSAFFQTDDLTSFEVNPSNLSKANTALQFATLGGALLNAAFHMPGDLAMNVMFGSVALSTFASGSMYL 242

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A1V9YRT6_9STRA (Cardiolipin synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YRT6_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.740e-40
Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 1

Query:  559 AASMIEKESDR--VWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDLDSL-DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYL 1131
            +AS  EK ++   V  +PN IT  RI   P L  LI T  +  AL  L  A  +DWLDGY+ARK  Q +++G FLDPLADK+MV T+ +++   G++P  ++ ++ GRD LLV G+  +R+ T+  G  FF  D L  ++VTPS LSKVNT LQFGTL   L N+ +  PG+   + L     ++T ASG  YL
Sbjct:   38 SASSNEKSNNPHDVVNLPNAITFTRIVSTPYLGYLIATGNYPTALGVLGVAGFSDWLDGYLARKLNQKTIVGTFLDPLADKLMVGTLCVSMAYTGLLPLPVMVIIFGRDLLLVGGTFYHRYHTKTSGSGFFQTDDLTSFEVTPSLLSKVNTALQFGTLGSALLNATFQFPGELAMNVLFGSVAISTFASGSMYL 231

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: K3WNK1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNK1_GLOUD)

HSP 1 Score: 150 bits (380), Expect = 7.040e-39
Identity = 87/182 (47.80%), Postives = 114/182 (62.64%), Query Frame = 1

Query:  589 RVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDL-DSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYL 1131
            +V  VPN+IT  RI   P L+ LIV  QHE A+ GL  A  +DWLDGYIAR +KQ S++G FLDP ADK+M+  ++L++   G++P  LV L+ GRD LLV+G+  +R KT+    AFFD  DS  ++V P+ +SKVNT LQF      LTN+ + VP D     L    G  T ASG  YL
Sbjct:   77 QVVNVPNVITFARILSTPYLSYLIVDGQHEAAI-GL--AGFSDWLDGYIARTYKQESIIGSFLDPFADKLMIGALSLSMMWSGLLPWPLVTLIFGRDVLLVSGTFYHRLKTKDVDTAFFDTSDSGAFEVKPTMISKVNTALQFALFGFTLTNAAWQVPFDPALQGLFGVVGATTFASGSEYL 255

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BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Match: A0A3F2RV38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RV38_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.120e-39
Identity = 80/182 (43.96%), Postives = 112/182 (61.54%), Query Frame = 1

Query:  589 RVWTVPNIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQTSVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIAYRFKTRREGDAFFDL-DSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYL 1131
            +V  VPN+IT  RI   P L+ LI+   H  A+  L  A ++DWLDGYIAR + Q S++G FLDP ADK+++ T++L++   G++P  L AL++GRD +L+ G++ +R KT+ E   FFD  DS  ++V PS LSKVNT LQ     L LTN+ + +P D     L    G  T  SG  YL
Sbjct:   11 QVVNVPNVITAARILATPYLSYLIIQGDHVSAIGLLAVAGISDWLDGYIARTFHQESIVGSFLDPFADKLLIGTLSLSMMWTGLLPLPLAALILGRDGMLIGGTLYHRLKTKDESSGFFDTKDSGTFQVKPSLLSKVNTALQLSAFGLTLTNAAWQLPPDPALHVLFGVVGTTTFLSGSEYL 192

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1039.302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KUV6_9PHAE	3.620e-192	80.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FT37_ECTSI	1.410e-144	97.75	CDP-alcohol phosphatidyltransferase n=1 Tax=Ectoca...	[more]
A0A4D9CZ77_9STRA	5.600e-45	47.09	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A8K1CPA2_PYTOL	9.530e-44	48.90	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
W7TR40_9STRA	5.050e-43	46.60	Cdp-diacylglycerol--glycerol-3-phosphate 3 n=1 Tax...	[more]
A0A1V9ZN07_9STRA	4.020e-42	46.70	Cardiolipin synthetase n=1 Tax=Achlya hypogyna Tax...	[more]
A0A067CS69_SAPPC	2.030e-40	44.44	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A1V9YRT6_9STRA	5.740e-40	43.81	Cardiolipin synthetase n=1 Tax=Thraustotheca clava...	[more]
K3WNK1_GLOUD	7.040e-39	47.80	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A3F2RV38_9STRA	7.120e-39	43.96	Uncharacterized protein n=1 Tax=Phytophthora kerno...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1039	contig	E-siliculosus-1a_F_contig1039:19952..25355 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1299
Model size	1305
Exons	8
Ec32 ortholog	Ec-04_002700.1
Ec32 ortholog description	CDP-alcohol phosphatidyltransferase
Hectar predicted targeting category	mitochondrion
BRITE	br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03032
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	I
EC	2.7.8.41,3.6.4.12
EggNOG OGs	COG0558@1,KOG1617@2759
EggNOG free text desc.	cardiolipin synthase activity
GOs	GO:0000002,GO:0001101,GO:0003674,GO:0003824,GO:0003841,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006163,GO:0006164,GO:0006605,GO:0006612,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006873,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0008104,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016780,GO:0016787,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019866,GO:0030145,GO:0030572,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032048,GO:0032049,GO:0033036,GO:0033993,GO:0034613,GO:0034641,GO:0034654,GO:0036148,GO:0042127,GO:0042171,GO:0042221,GO:0042391,GO:0042493,GO:0042592,GO:0042886,GO:0043167,GO:0043169,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043337,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045184,GO:0046034,GO:0046390,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0046683,GO:0046872,GO:0046907,GO:0046914,GO:0047144,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051881,GO:0055082,GO:0055086,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0071617,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072521,GO:0072522,GO:0072657,GO:0090150,GO:0090407,GO:0097066,GO:0097068,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698,GO:1901700,GO:1904386,GO:1905711
KEGG Module	M00178,M00179
KEGG Pathway	ko00564,ko01100,ko03010,map00564,map01100,map03010
KEGG Reaction	R02030
KEGG ko	ko:K02950,ko:K08744,ko:K10737
KEGG rclass	RC00002,RC00017
Preferred name	CRLS1
Seed eggNOG ortholog	2880.D7FT37
Seed ortholog evalue	3.9e-115
Seed ortholog score	421.8
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927541.4692492-UTR-E-siliculosus-1a_F_contig1039:25349..25355	1622927541.4692492-UTR-E-siliculosus-1a_F_contig1039:25349..25355	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1039 25350..25355 -
1696318576.3299372-UTR-E-siliculosus-1a_F_contig1039:25349..25355	1696318576.3299372-UTR-E-siliculosus-1a_F_contig1039:25349..25355	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1039 25350..25355 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1039.302.1	prot_E-siliculosus-1a_F_contig1039.302.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1039 19952..25349 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1039:19952..25355-
coding sequence from alignment at E-siliculosus-1a_F_contig1039:19952..25355-

protein sequence of mRNA_E-siliculosus-1a_F_contig1039.302.1

>prot_E-siliculosus-1a_F_contig1039.302.1 ID=prot_E-siliculosus-1a_F_contig1039.302.1|Name=mRNA_E-siliculosus-1a_F_contig1039.302.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=433bp
MVVRATRVLVGRCRQISASRCAGQRQRHSRNYYGDAPVRLSAARCLATVA
AAPLPRPQPTSSLSCPARPHSSSSSSTAGRRRGGAASNYTKIRSPSPQQQ
RQQQQGQQQRSKTPAVAASRRALRVCSSSPSQFRQRQMRQEHYKTDARST
GQGGKVDDGGGVRQGEGDRSSRDGERFEEEEEEGAASMIEKESDRVWTVP
NIITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQT
SVLGGFLDPLADKVMVTTVALALGQQGIVPPALVALMVGRDALLVAGSIA
YRFKTRREGDAFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLV
PGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRENLQER
YREREVLVRERMGVGRERMRVRKVRVCCRRLR*

mRNA from alignment at E-siliculosus-1a_F_contig1039:19952..25355-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1039.302.1 ID=mRNA_E-siliculosus-1a_F_contig1039.302.1|Name=mRNA_E-siliculosus-1a_F_contig1039.302.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5404bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1039:19952..25355- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACACCATGGTGGTGCGAGCAACGAGAGTTCTTGTGGGCAGGTGCCGCCA
GATATCGGCCAGGTGATAAACGCAATGCTCCAATGTCGTTTCTGTTGGAG
GAATCACGCATCATCTTGCTCCCCTGTCTCGTACAATATGATCCCGGTTT
CTTTCGCACTCGCTCTCTGTCGTTGTTATGCGACCGTTCGAGTTTTGTTC
TTGGAAAGCCACGAGCGCGTGAGATACTCTGGTCCTCCCTTTGCAGTTAT
AGCCTGCACTGCGTGTGCCATGGGTTGGCTTGGGTCGTCTCGCCTCATGG
AATGTACTACATCTCCACGCCGCTTCAGCTTTGGAGAGGTTTCCACTTGA
CAGAGCATGGAGCAACCACAACTGCTGTAACAGCAGTACAGGCAGTAGCT
GTCCACCGCGCCTTGACATATGCCTACTGGCAACCGTCCTTCGTGATTAG
GCGAAAGGATTGGACTACCACTACTGTCCAGTTGGGTTGTACGGCTAAAG
TCGTTATTCTGGTTGGTATTACCGTGGTTGGTTGTATGCTGGATGGATGC
GGTAGAGTCGGTCGTGATCCCACATATGAAGCATGAGGAGCCCCGAGAAG
TCGTGTGCTTCGAGGCAAGAACCACAGACATACATAGCACGAACTCATGC
TGCTGAGAAGCGTGATTTTTCCGGTACCCACCATCTTCGCTAAGTAAACA
CTAAGCCTATTGGTCCCGGGGGGGGTTAAAACGCAGCCGTGGCAAGTGGC
AAGTGCTAACAGGGCCCAACAAGTTATTCCGCCCTCTCTATGTGCTTCGC
TCCCTTGTTGGCGTGAACACATACCAGCAGGTGCGCCGGTCAACGCCAAC
GCCACAGCCGCAACTACTACGGTGACGCGCCCGTGCGGCTGTCGGCTGCG
CGATGCCTCGCCACCGTCGCAGCGGCTCCACTGCCACGACCGCAGCCCAC
GTCGTCGCTATCGTGCCCGGCGCGGCCTCACAGCAGCAGCAGCAGCAGCA
CCGCCGGTCGAAGAAGAGGCGGTGCAGCTTCGAACTACACCAAGATACGA
TCGCCGTCGCCACAACAGCAGCGGCAGCAGCAGCAGGGGCAACAGCAGCG
ATCAAAGACACCGGCAGTCGCTGCCTCGAGGAGAGCGCTGAGGGTTTGCT
CTTCTAGCCCCAGTCAATTCCGACAGAGACAAATGCGGCAGGAGCACTAC
AAGACCGACGCCAGGAGCACCGGGCAAGGGGGAAAGGTAGACGATGGGGG
GGGAGTACGGCAGGGGGAGGGCGACAGGAGCAGCCGCGATGGCGAGCGTT
TTGAGGAGGAGGAAGAGGAGGGAGCCGCTTCGATGATTGAAAAGGTGTTT
GTTTTCGTGGCGGGGAACAGATTGGATTTGGGAAGGGTTGGGACGTGTGG
TCCGCCCACCTTTCTGTGTTGCTCGGGTGCACACAAGCTCCGGGTTCCTG
ATCAAGTTAACTCGGACCTACCACACGCGCGCACTGCTGTACACTCATGG
TGTGTGTGGCTGTGACATATGCTGCTTCCGTTTTTTGTCACGGGGGTTTT
GCATGACGTGACAACGCCAAAATACCGTACCGTCCTTTCCCTTATTAATA
GTAGTCTTTCTCACGCGAGTTCACCTTCATCGCCTTCATGGCGTTCTTAC
CTTGTCGCCGTTGTTGTCGTTGTTGTCGATTGATTTGCACGCGAGTGGAA
ACCGCTCACACACCCATCCTGTCGATCGCACGCCTGTCGCCTTCCCCTCT
GATCCCTCTCTGTTTGGCTTGTTCGTATTTTTGTATGTCCACCCCGTCCC
TCCCTTGTCCGTCCGCTCGAGGGCGCGTGGTCAATGGTCTAAATAACCGC
TAAGGCATGCAAAACATAAAGAGTAAGAGAACGCCATCCCTCCCTTCCTC
TCCTGCCTGTCTTGCGCTTGGTGTGTCCTCCTCCGATGTCGTCGCGGAAA
AGGAATCCGACCGTGTGTGGACCGTGCCCAACATTATCACCATGGGTCGG
ATAGCCTTCTGCCCTGTCCTGGCCGGCCTCATCGTCACCTCCCAGCACGA
GCTAGCTCTCGCCGGTGAGAGGGAGGCCTTGGTCTCCGGCCTTTTTTTTT
TTTTTTTATCTCCGAGGGCGGGGTAGGGTATCTATCCCGCACAGCCCGCG
TGACTGAGTGTGTGTGTGTGTGTCCTGCCGCTACGTGGTGGCACATGTTT
GTCCTTGTGGCATATCTTTTGTCCTTGACGTGTCACATCCGTCTCCTGTT
GTGCGGCATTATCCTAGAAACTTTTTGTCTGTACGTGCACCCTGCGGGAA
TTTTTCGCGGGTTCGATGTACGACGGCGTCCGGTGGGCTTTTCGTGTATC
GCGGATTTCTGTTTTGTTTGTGTCTCGCCCTTGTACCATATCCTGCGGGC
GCTCAGCGGCTTGCCCACGCCCTTTGTGTCTTGTTGTTCACGTGTTGTCT
TTTTGGTCGTAGTCGATACGCTCGATGGTGCCCGTTTGGTCCGGAGGTTA
CGATTAAATACATACGTAGTCCCACTGGTGCCGTTGACGAAGTTACCGAG
CTTCACCGTGCTCTGATGAGAACGTAAGCGGTACCTCATAAGATTCCTTG
TGTATGGTACTTGTTGTTGCTGTGCTGTTTTTTTTCCAGGGTTGCTGGCG
GCGAGCTTAACGGACTGGCTAGACGGATACATCGCACGGAAGTGGAAGCA
AACGGTGAGGAACAACGGCCGTAGTCGTCGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGTGTATAGCTATGTACAACGCCGCCCCCTGCTTTGCTTTGA
GACAACTGCAATGCTCCTTCCGTTCGGTGGCACAGCGTTCCCACCCTGTT
TCCTCCCCCCGAACTGATACCAGTGATGGGGTTCCTAACAACCATGCCTG
TTTCGCGGATAGAAGATCGTGGGAAGGAAGCATTTCGAAGGTATGCGCGT
TCGCGAGAGAGGCGTAAGCGCCACAGCCGGACTACATACCCGTACCGCAC
TGTTTCTCGGTGTGTCGAGGTCTTGCTGCTGGCATTTGGGCTTCCCGCGA
ATGCGTATGCCTTCGAAATGCTCCGTGCCCACATCTTTTCTATTCGCGAA
CAGGCGTAGTTTCTAGGAGTCACCTTCATTGGGCGGGGGGGGGGGGCAGG
GAGAAATTGCTTTGCCACGGAAAGAAGCATTGCAGTCGTCTCAAAGTAGA
GCAGGGGGGACCGTTGTACTTAGCTATACACAGCAGCCGCGACGTTTAGC
GGCGGGTTCTCTTTTGGGGCTGCGCGTCGTTTCGGGAAGCTGCGAGCCCT
TCACTCCGCTATTTCTTCCCCGTCGCTCCTGAACAGTATGGTAGCGTATA
TCTCAGAAACAAAGATAATGTAGCGTCCGACATGAAACACCTACATCTGT
TGGACACCCGATGATCACACGTCTTATCGAAACCGTTCTTGTACGACATC
ACCCTTAAGATGTTTTCTCCGTTTGTTCTCCAACCGACCGCATCACAGTC
AGTGCTTGGCGGGTTCTTGGACCCTTTGGCCGACAAAGTGATGGTGACCA
CGGTGGCACTGGCTCTGGGTCAGCAGGGAATCGTTCCTCCTGCTCTTGTG
GTGAGGAAGGCATTGAGGGAAATGGGTGGCGGGACGGGGTAGAGAGAGAA
GGGGGGGGGGGGGAGAGAGAGAGAGGGACACAGAGAGGGACAACGAGACA
GAGAATGAGAGAGAGAGACAGATAGAGACACACAGAGAGAGACAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGAACGGCATT
GACACAAGGCCAAGGGCTGGAGAAGAGCTTTAATGACGAGACCGCTGTTA
ACGACTCTCGGTGTTGTTTTGTCCTGTCCTTGCCTTGTCCAGGCACTAAT
GGTGGGGCGCGACGCGCTTCTCGTCGCGGGGTCCATTGCCTACCGCTTCA
AGACTCGAAGAGAAGGAGACGCTTTCTTCGACCTAGACTCCCTCGATTAC
AAGGTCACTCCCAGCACTCTCAGCAAAGTGAGGACAACTGCTGCTGCTGC
TGCTGCTTGTTTTGCCGAAACGTTGCCGCTGCGTGTACCCACGTGGTTGT
TGCTGCTGCTACTGCCTCGGCCTGTTGTTGATATTGCCGCCGCTGCTAGA
CACCGTTGCTCGCAGTGTGGGTGTACAGATGTACAGACGCTAAATATTAA
TTTTCTTTGTTGGAAGCATGTCTGTTAACGTCGCTCGATCCGCACGCACG
GCACAGGGTGGTTGCTGGCAATGACCTTGTCGCGCACCCAACGTGTCCTT
CTCCCCACAACACCAGCAGCGCCTTCAGAAAGAAAAAAGACACCCCACTC
CCTCTCGTATATCATCGCTCCCTCTCGACAGGTTTGGTCTGCCCTGACTT
TCTTCTCCCCCCCCCCCCTTTTTTGTTGTTGCTGGTCGCCGTCACCGTGA
CAGGTGAACACCGTCCTGCAGTTCGGCACTCTCTGGCTGGGACTGACCAA
CTCCGTCTACCTCGTTCCAGGAGACGCCGTTTTTTCCGCCTTGTGGTAAG
CGGGATAACCAAAGTGGGCTCTTTCCCTACCAGTCAGCGATGCTCGGCTA
CTTGTAGAGCATCTCTCGCAACCGTTAGGGTGTCGTCGACACTCTTTTCT
GTGACAAACATTTGGTGGTTGGTCACGATGCATCCTCGCCCCCCCCCCCA
CCCCCCCCCTTTTTTGACGATTTTGCCTCGTTGCGGTCGTTGTCTGCCGT
AACACACTCAATAGAGCAGCCCAACCGTTGGAGGCGTAGGTCTCTCTCAG
GAGTGCAGTCTGCGCACCGTCTCGGAATAGACAGGTCATAGTGATCACTG
GGGGAAAATGACTCGAACGCAGCACGCGTAGCAAACGGTTACACCTATCC
GCCTAACCGCCTTGCCTGTTACACCTTCGACACACCCAGCCCATGTAACT
GGCTATCAAGCCCACACACACCTCTATGGTTCTACCGTACATTTCGTGCG
GTCTGCTGGTAGTGCGCCACATTGGTTCTGGCCTACATTTTGTCGACCAA
CGTTGTCCCTTGACCCCCCCCCCTTGCCCACCGCGACCTTTGCCGGCACT
TACTCGTGAAAACAACCACCACAACACACGACGAACCCGCACGAACGTGT
TGTTATGCGTGCCTGAACACTGGGCAACAACCAGCGTCGGCACCGGGGTG
GCCACGTTAGCGTCGGGAGTCAACTACCTCCTGGTGTCCGGGCTGAAGCC
CAAGGGAAGGCTCGGCAAGCGGCTCATGATTCAGAGGGAAAACCTTCAGG
AGCGGTACCGAGAGAGGGAGGTGCTGGTCAGGGAGAGGATGGGGGTCGGG
CGGGAGCGCATGCGGGTCAGGAAGGTGCGCGTGTGCTGCCGCCGGCTGCG
TTGA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1039:19952..25355-

>mRNA_E-siliculosus-1a_F_contig1039.302.1 ID=mRNA_E-siliculosus-1a_F_contig1039.302.1|Name=mRNA_E-siliculosus-1a_F_contig1039.302.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2598bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1039:19952..25355- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTGGTGCGAGCAACGAGAGTTCTTGTGGGCAGGTGCCGCCAGATATC
GGCCAGATGGTGGTGCGAGCAACGAGAGTTCTTGTGGGCAGGTGCCGCCA
GATATCGGCCAGCAGGTGCGCCGGTCAACGCCAACGCCACAGCCGCAACT
ACTACGGTGACGCGCCCGTGCGGCTGTCGGCTGCGCGATGCCTCGCCACC
GTCGCAGCGGCTCCACTGCCACGACCGCAGCCCACGTCGTCGCTATCGTG
CCCGGCGCGGCCTCACAGCAGCAGCAGCAGCAGCACCGCCGGTCGAAGAA
GAGGCGGTGCAGCTTCGAACTACACCAAGATACGATCGCCGTCGCCACAA
CAGCAGCGGCAGCAGCAGCAGGGGCAACAGCAGCGATCAAAGACACCGGC
AGTCGCTGCCTCGAGGAGAGCGCTGAGGGTTTGCTCTTCTAGCCCCAGTC
AATTCCGACAGAGACAAATGCGGCAGGAGCACTACAAGACCGACGCCAGG
AGCACCGGGCAAGGGGGAAAGGTAGACGATGGGGGGGGAGTACGGCAGGG
GGAGGGCGACAGGAGCAGCCGCGATGGCGAGCGTTTTGAGGAGGAGGAAG
AGGAGGGAGCCGCTTCGATGATTGAAAAGCAGGTGCGCCGGTCAACGCCA
ACGCCACAGCCGCAACTACTACGGTGACGCGCCCGTGCGGCTGTCGGCTG
CGCGATGCCTCGCCACCGTCGCAGCGGCTCCACTGCCACGACCGCAGCCC
ACGTCGTCGCTATCGTGCCCGGCGCGGCCTCACAGCAGCAGCAGCAGCAG
CACCGCCGGTCGAAGAAGAGGCGGTGCAGCTTCGAACTACACCAAGATAC
GATCGCCGTCGCCACAACAGCAGCGGCAGCAGCAGCAGGGGCAACAGCAG
CGATCAAAGACACCGGCAGTCGCTGCCTCGAGGAGAGCGCTGAGGGTTTG
CTCTTCTAGCCCCAGTCAATTCCGACAGAGACAAATGCGGCAGGAGCACT
ACAAGACCGACGCCAGGAGCACCGGGCAAGGGGGAAAGGTAGACGATGGG
GGGGGAGTACGGCAGGGGGAGGGCGACAGGAGCAGCCGCGATGGCGAGCG
TTTTGAGGAGGAGGAAGAGGAGGGAGCCGCTTCGATGATTGAAAAGGAAT
CCGACCGTGTGTGGACCGTGCCCAACATTATCACCATGGGTCGGATAGCC
TTCTGCCCTGTCCTGGCCGGCCTCATCGTCACCTCCCAGCACGAGCTAGC
TCTCGCCGGAATCCGACCGTGTGTGGACCGTGCCCAACATTATCACCATG
GGTCGGATAGCCTTCTGCCCTGTCCTGGCCGGCCTCATCGTCACCTCCCA
GCACGAGCTAGCTCTCGCCGGGTTGCTGGCGGCGAGCTTAACGGACTGGC
TAGACGGATACATCGCACGGAAGTGGAAGCAAACGGGTTGCTGGCGGCGA
GCTTAACGGACTGGCTAGACGGATACATCGCACGGAAGTGGAAGCAAACG
TCAGTGCTTGGCGGGTTCTTGGACCCTTTGGCCGACAAAGTGATGGTGAC
CACGGTGGCACTGGCTCTGGGTCAGCAGGGAATCGTTCCTCCTGCTCTTG
TGTCAGTGCTTGGCGGGTTCTTGGACCCTTTGGCCGACAAAGTGATGGTG
ACCACGGTGGCACTGGCTCTGGGTCAGCAGGGAATCGTTCCTCCTGCTCT
TGTGGCACTAATGGTGGGGCGCGACGCGCTTCTCGTCGCGGGGTCCATTG
CCTACCGCTTCAAGACTCGAAGAGAAGGAGACGCTTTCTTCGACCTAGAC
TCCCTCGATTACAAGGTCACTCCCAGCACTCTCAGCAAAGCACTAATGGT
GGGGCGCGACGCGCTTCTCGTCGCGGGGTCCATTGCCTACCGCTTCAAGA
CTCGAAGAGAAGGAGACGCTTTCTTCGACCTAGACTCCCTCGATTACAAG
GTCACTCCCAGCACTCTCAGCAAAGTGAACACCGTCCTGCAGTTCGGCAC
TCTCTGGCTGGGACTGACCAACTCCGTCTACCTCGTTCCAGGAGACGCCG
TTTTTTCCGCCTTGTGGTGAACACCGTCCTGCAGTTCGGCACTCTCTGGC
TGGGACTGACCAACTCCGTCTACCTCGTTCCAGGAGACGCCGTTTTTTCC
GCCTTGTGCGTCGGCACCGGGGTGGCCACGTTAGCGTCGGGAGTCAACTA
CCTCCTGGTGTCCGGGCTGAAGCCCAAGGGAAGGCTCGGCAAGCGGCTCA
TGATTCAGAGGGAAAACCTTCAGGAGCGGTACCGAGAGAGGGAGGTGCTG
GTCAGGGAGAGGATGGGGGTCGGGCGGGAGCGCATGCGGGTCAGGAAGGT
GCGCGTGTGCTGCCGCCGGCTGCGTTGACGTCGGCACCGGGGTGGCCACG
TTAGCGTCGGGAGTCAACTACCTCCTGGTGTCCGGGCTGAAGCCCAAGGG
AAGGCTCGGCAAGCGGCTCATGATTCAGAGGGAAAACCTTCAGGAGCGGT
ACCGAGAGAGGGAGGTGCTGGTCAGGGAGAGGATGGGGGTCGGGCGGGAG
CGCATGCGGGTCAGGAAGGTGCGCGTGTGCTGCCGCCGGCTGCGTTGA