mRNA_E-siliculosus-1a_F_contig1039.301.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1039.301.1
Unique NamemRNA_E-siliculosus-1a_F_contig1039.301.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI)

HSP 1 Score: 664 bits (1712), Expect = 2.670e-240
Identity = 341/351 (97.15%), Postives = 345/351 (98.29%), Query Frame = 1
Query:    1 MGAVSDDNATGKRDGKVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 1053
            MGAVSDDNATGKRDGKV+VQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPR ASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAA KQAGRASKSCAHGNIGG GKTLDGDVGRGGGGDRSCALAETTVVGRAQAG VLASTENMS GCSGGG GAKR+GGRAKFSA+VAPAEMFVKDMG+TPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA
Sbjct:    1 MGAVSDDNATGKRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGG-GAKRKGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK)

HSP 1 Score: 235 bits (600), Expect = 1.920e-71
Identity = 141/339 (41.59%), Postives = 196/339 (57.82%), Query Frame = 1
Query:   34 KRDGKVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRK 1050
            K   +V ++ L+ F+FP  LQHPLSTGRL+AF LYGPLD NS+LRSG+ GQ +V  +E+D MC +FERE ILQVY+ G     +L++++ E VIAQAD   K AKG+    QV+R E   L + LPRDA G +SFHD Q+ I+ YRE++IA  KVIFPE+ G                                           +  V    + G+     + M  G       AK++G     S  VAP EMF K  G+T   +++  ++LLS  A+++++I  GN   LTQNV+L+R+ R+P+ G+  WD  +CLRG NIGGHV++A+S+TT KRK
Sbjct:   37 KAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXDPQQAAVSDAGEPGSXXXXFKLMDAGRQ-APVSAKKKG----LSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGR-KWDSNSCLRGSNIGGHVKTAKSATTVKRK 357          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA)

HSP 1 Score: 221 bits (564), Expect = 7.830e-67
Identity = 136/337 (40.36%), Postives = 187/337 (55.49%), Query Frame = 1
Query:   55 VQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTL-PRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIR----DDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRK 1050
            ++ +  F+FP++LQHP+STGRL+AF  YGPLD+++ LRSG+ GQ VV  WE+DTMC QFEREDILQ+Y+  G+    L + Q EE++AQADS LK AKG+   +QVT  EV  + S L P  A+GL+ FHD Q+ I+ YR+  I   K +FPE+   A R  + ++                                 E T +G       L +T N      G G    RR    +  A VAPA MF++D G     +A+ T+KLL  +A+ + NIADGN   LT NV+L+R    D     +G+ TWD     RG  +G  V++ +SSTT KRK
Sbjct:    1 LEAVKRFVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTSKAKRIGSLKSGP-------------------------------EFTPIGP------LGATYNEF----GPGRSTGRRTRGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.190e-56
Identity = 117/314 (37.26%), Postives = 166/314 (52.87%), Query Frame = 1
Query:   49 VDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIR-DDRQPEQGQGTWDPYACL 987
            V + +L+ F+FP  L HPLSTGRLYAF  YGPLD   +LRSG  GQ V+  WE+D MC QFERED LQVY+S GR L  L++ Q+ E+I+QAD+ +K+ +G+G   Q+++ EV D+   +     G + FH+ Q+ ++ +RE +I + +V++P +A    R                            G GG ++ +    T   R+                         R   AK S  VAP  MF KD G   + +A   +++L TRAYK+ +I D N P LTQNV LIR DD+  E G+G W   +CL
Sbjct:   78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYPLVARKPLRV---------------------------GFGGSQTASRKSLTSTKRS-------------------------RRTTAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDKDRELGEGPW---SCL 335          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.950e-51
Identity = 119/335 (35.52%), Postives = 164/335 (48.96%), Query Frame = 1
Query:   46 KVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHT--------------------SKLLSTRAYKVSNIADGNDPGLTQNVKLIRDD--RQPEQGQGTWDPYAC 984
            +V + +LL+FIFP  LQHPLS+GRL  F  YGP   N +L SG  G+ VV  WE+D+MC   +RED+LQVY+S  RPL  L  AQ+EE+IAQ+              Q+TR +V+ L   +PR      SFHD QK+++ YR++++A  K+++P +A  +      RA  +                                      + G   A+     I           RG + KFS DVAPA MF+KD G     +A                       +KLLST+A+K+S+I DGN+P LT NV+LIR+D   QP QG   WD   C
Sbjct:   27 RVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLAAHSKSPPRKRAQST--------------------------------------EKGTATAAQRQSPI----------SRGHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQP-QGGAQWDETCC 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.420e-40
Identity = 76/146 (52.05%), Postives = 98/146 (67.12%), Query Frame = 1
Query:  103 LSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQA 540
            +STGRL AF  +GPLD  + LRSGY GQ VVS WE+DTMC QFEREDILQVY+  G+    L + +  E++AQAD+ +K AKG+   +QVT  EV +L + L RD  GL++FHD Q+ IM +RE  I   KVIFP +  G  +  A
Sbjct:    1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGKPGA 146          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.680e-36
Identity = 105/318 (33.02%), Postives = 147/318 (46.23%), Query Frame = 1
Query:   25 ATGKRDGKVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDR-QPEQGQGTWDP 975
            A+  + G +D+ +LL F+FPK LQHP S GRL+ F LYGPLDS+S LRSG  G  VV+  E+ TM  + EREDIL VY      +  L+  ++EEV+ Q D  LK         Q T  ++  L S L RDA G ++FHD Q+ +M  R +++   K       G   R Q  R                                               L +T+  S+                    + AP+  F+KD+G T    A   S+LLSTRA+++  + DGN P LTQNV+L+R D+ Q    +  W+P
Sbjct:  203 ASPTKSGAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVVCMKERLHPALGVLVRNQFARTLTR-------------------------------------------LTATKGDSL-------------------VNGAPSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPDKAQQFVNRDPWNP 447          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A3R7GTJ3_9STRA (NDK domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GTJ3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.190e-31
Identity = 98/301 (32.56%), Postives = 136/301 (45.18%), Query Frame = 1
Query:   25 ATGKRDGKVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKL 927
            A+  + G +D+ +LL F+FPK LQHP S GRL+ F LYGPLDS+S LRSG  G  VV+  E+ TM  + EREDIL VY      +  L+  ++EEV+ Q D  LK         Q T  ++  L S L RDA G ++FHD Q+ +M  R +++   K       G   R Q  R                                               L +T+  S+                    + AP+  F+KD+G T    A   S+LLSTRA+++  + DGN P LTQN  +
Sbjct:  232 ASPTKSGAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----GMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVVCMKERLHPALGVLVRNQFSRTLTR-------------------------------------------LTATKGGSL-------------------VNGAPSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNPTM 459          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A7S1CK78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CK78_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.590e-30
Identity = 90/332 (27.11%), Postives = 161/332 (48.49%), Query Frame = 1
Query:   22 NATGKRDGKVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAAR-KQAGRASKSCAHGNIGGDGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGXGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHV 1014
            N+  ++   V++ +L + +FP  +QHP STGRL  F +YGP +   EL +G+ GQ  ++  E+ TM  + E+ED+L +++        L + ++ E++  A       KG+     ++R +V +L   L R+  G VSFHD Q +IMG R+ ++   + ++P++ GG ++ ++ GR  +  A      +GKT++    R            T+ +GR                             R + +    PA   ++ +G T        +++L+  ++++ +I  GNDP LTQNV+L+R    P      WD +AC+ G N G +V
Sbjct:  190 NSIVRKSHWVNLDDLYDLVFPPGMQHPRSTGRLIMFGMYGPFNDRGELCAGWKGQHRITDRELKTMIDEIEKEDLLSIFVKEKG----LVEEKQMEILKDAK------KGKSPLPNLSREQVEELFRPLKRNKKGQVSFHDMQAIIMGARQARLKELRQMYPDVTGGPSKGRKGGRKGEGKAA-----EGKTMEVSAFR----PPPPKFGRTSKLGR-----------------------------RPELANRKTPA---IRKIGETEG--FKVVAQMLNRESHRICDIEQGNDPSLTQNVRLLR--HLPRAKDNGWDDFACVGGANRGSYV 466          
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Match: A0A6G0WC23_9STRA (NDK domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC23_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.610e-30
Identity = 70/149 (46.98%), Postives = 96/149 (64.43%), Query Frame = 1
Query:   49 VDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFK 495
            V +  L++F+FP ++QH  STGRL+ FALYGPLDS S LRSG  G  VV+  E+DTMCL  EREDIL VY   G     L+ A++E+V+ QAD ++K         + TR ++  L  T+PR+A+GL+SFHD Q+ I   R ++I   K
Sbjct:  224 VSLDALMQFLFPPNVQHANSTGRLFVFALYGPLDSKSRLRSGEKGLHVVTDGELDTMCLSMEREDILSVYGMIG-----LSRAEEEQVLGQADQNMKDVP------RYTRADIQQLFRTVPRNANGLMSFHDMQEKITKERLRRIVCMK 361          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1039.301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT36_ECTSI2.670e-24097.15Aspartyl protease family A01A, putative n=1 Tax=Ec... [more]
A0A7S3Y154_HETAK1.920e-7141.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B712_9STRA7.830e-6740.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A522_9STRA3.190e-5637.26Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZGK5_9STRA1.950e-5135.52Putative aspartyl protease family A01A n=1 Tax=Tri... [more]
A0A7S2RFT5_9STRA2.420e-4052.05Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3R7K4N4_9STRA2.680e-3633.02NDK domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3R7GTJ3_9STRA5.190e-3132.56NDK domain-containing protein n=4 Tax=Phytophthora... [more]
A0A7S1CK78_9STRA2.590e-3027.11Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6G0WC23_9STRA8.610e-3046.98NDK domain-containing protein n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1039contigE-siliculosus-1a_F_contig1039:14120..16361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1056
Model size1056
Exons3
Ec32 orthologEc-04_002690.1
Ec32 ortholog descriptionaspartyl protease family A01A, putative
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CN2N@1,2QTJA@2759
Seed eggNOG ortholog2880.D7FT36
Seed ortholog evalue5.7e-189
Seed ortholog score666.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1039.301.1prot_E-siliculosus-1a_F_contig1039.301.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1039 14120..16361 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927541.2713053-CDS-E-siliculosus-1a_F_contig1039:14119..143711622927541.2713053-CDS-E-siliculosus-1a_F_contig1039:14119..14371Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1039 14120..14371 +
1696318576.2237303-CDS-E-siliculosus-1a_F_contig1039:14119..143711696318576.2237303-CDS-E-siliculosus-1a_F_contig1039:14119..14371Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1039 14120..14371 +
1622927541.3171632-CDS-E-siliculosus-1a_F_contig1039:15223..158111622927541.3171632-CDS-E-siliculosus-1a_F_contig1039:15223..15811Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1039 15224..15811 +
1696318576.2339244-CDS-E-siliculosus-1a_F_contig1039:15223..158111696318576.2339244-CDS-E-siliculosus-1a_F_contig1039:15223..15811Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1039 15224..15811 +
1622927541.3309765-CDS-E-siliculosus-1a_F_contig1039:16145..163611622927541.3309765-CDS-E-siliculosus-1a_F_contig1039:16145..16361Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1039 16146..16361 +
1696318576.243318-CDS-E-siliculosus-1a_F_contig1039:16145..163611696318576.243318-CDS-E-siliculosus-1a_F_contig1039:16145..16361Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1039 16146..16361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1039.301.1

>prot_E-siliculosus-1a_F_contig1039.301.1 ID=prot_E-siliculosus-1a_F_contig1039.301.1|Name=mRNA_E-siliculosus-1a_F_contig1039.301.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=352bp
MGAVSDDNATGKRDGKVDVQELLEFIFPKSLQHPLSTGRLYAFALYGPLD
SNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQ
KEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQ
KLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCAHGNIGGDGKTLD
GDVGRGGGGDRSCALAETTVVGRAQAGNVLASTENMSIGCSGGGGGAKRR
GGRAKFSADVAPAEMFVKDMGYTPAGIANHTSKLLSTRAYKVSNIADGND
PGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRK
A*
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mRNA from alignment at E-siliculosus-1a_F_contig1039:14120..16361+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1039.301.1 ID=mRNA_E-siliculosus-1a_F_contig1039.301.1|Name=mRNA_E-siliculosus-1a_F_contig1039.301.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2242bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1039:14120..16361+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGTGCCGTCAGTGATGACAACGCTACGGGGAAGCGAGATGGCAAGGT GGATGTGCAAGAGCTTCTTGAGTTCATTTTTCCGAAGTCGCTGCAGCATC CACTATCGACAGGCAGGCTATACGCATTCGCCCTGTACGGCCCGCTGGAC TCCAACTCGGAGCTACGGTCTGGATACAACGGGCAACGGGTTGTAAGCAC GTGGGAGATCGATACAATGTGCCTTCAATTCGAGCGTGAGGATATCTTAC AGGTGTGAGGCACACACACGTATGTAGGTAGGTATGATCTCTGGGTGTCA AAACGTGTGCGGGCGTTTCTTTGTGTTCTTGTCATACTGTAGAGACGTAT TTTGTGGAAACCAGGATATAGGTAAATTCCCAGTAGTAGGGACGCACATA CAACCGTATAGATCCGTGACCCCAGGAACGATGTTCTCGAGGTCTGAAGA TCTTTACAACGAAAAGACCCTCCGTCTGCTGTGACCAGCCGGAGGGTGGA AGCGAGCCCCTAAAGCTCACTCTCACCTTTCACCCTGGCAAGGCTGACTA ACGTCAGCCACGCTTGGCCATTCCTTGCCACATTGCAATAAGAGCGAAAT TACCTCCGTTGGTGAACGATTATTCACCACTTCAGGGACCTTTGCTCATA ACGGAGCAAGGGTATTCTCAGAGTACGTGTTTTGCACATGTCGAATGAAC GTGCAATAGTTGTGTGCGTGGTCTTCATGGAGTCGAATTTTTGTTTGATA CATACCTGAAATCAGAGCGTACTCTCCAACTTCGAAGCGATACGAGAAAC CATGTATTATACTCTCACCAGTTGGAGGACTGCCAAAGATGGGGAAACAT TAGGCAGAGATCGAACCCACCAACAACATGCACCATCCTTATCAGTCGAC ACACTTGGAGTTGCCTCGTCACAACAAAACAAGCCACTCGGAACGATACT ACCAAAACAATGAGCATCGAGCCTACACCGTTGCCATCGATCGCTTCGCA GCACGATCCTTCATGCTCCAACCTCTCTCGAAATAATTTTCAGGTTTCGG TTAACGTCCCATGTTATGCAACCCTACGAATGAATCAATGGATCCAACGC AAAGGTCTACATTTCGGGCGGGAGGCCGTTGTTCGTCTTGAACGATGCCC AGAAGGAAGAGGTCATCGCGCAGGCGGACAGCCACCTCAAGACGGCGAAA GGCCGTGGCTATCGCCGACAAGTCACCCGAGGGGAGGTCGTCGACCTGCT GTCAACGTTACCAAGAGATGCCTCGGGACTCGTGAGCTTTCATGACGCTC AGAAGCTCATCATGGGATACCGAGAAAAGCAGATAGCACGATTCAAGGTC ATTTTCCCCGAAATTGCCGGAGGAGCGGCTAGGAAGCAGGCGGGCCGGGC TTCAAAATCTTGTGCGCATGGAAACATCGGCGGAGACGGAAAGACTCTGG ACGGGGATGTAGGGCGTGGTGGTGGAGGCGATAGAAGTTGCGCTCTTGCG GAGACCACGGTCGTCGGACGGGCTCAAGCTGGCAACGTTCTTGCATCGAC TGAGAACATGTCAATAGGGTGCTCCGGCGGCGGCGGCGGGGCGAAAAGAA GGGGCGGCAGGGCCAAGTTTAGCGCCGACGTTGCTCCGGCTGAGATGTTC GTCAAGGACATGGGCTACACCCCAGCGGGCATAGCCAACCATGTAAGCCC CTCCTCCTCCTTCTGCCAATGTGGTGTCCCTACAGCGTATCTCAAACTCT TTAACTCGGGCTTAGAGTGCAGCAACTGTTTTTGCGGAGGAAACGGGCCG AACAATGTCCCTTGTCCTGATATGAAATACTCACCGGACGACAGTGTTTA TCTACTCGTAAAGGGCTGTATGTCCTCGCAAGAAGATCATTTCATACTTA CCTCGACAACACGGCTCGAATGATGGATAATAGTTACATACGTAGGTGTA AGATCCGTAATGCCCTCTCGTTCTTCTCTGCCCCGCCCCCCGCCGCTCTG CGCGCTCATCACACTCTGCCCTTCAGACTAGCAAGCTCTTGAGCACTCGC GCGTACAAGGTCAGCAACATCGCTGATGGCAACGACCCCGGACTGACTCA AAACGTGAAGCTCATCCGAGATGACAGACAACCGGAGCAGGGGCAAGGAA CGTGGGACCCTTACGCTTGCCTGAGGGGGTACAACATCGGCGGTCACGTG CGGTCGGCGAGGAGCTCGACCACAGCCAAGCGCAAAGCCTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1039:14120..16361+

>mRNA_E-siliculosus-1a_F_contig1039.301.1 ID=mRNA_E-siliculosus-1a_F_contig1039.301.1|Name=mRNA_E-siliculosus-1a_F_contig1039.301.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2112bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1039:14120..16361+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGTGCCGTCAGTGATGACAACGCTACGGGGAAGCGAGATGGCAAGGT
GGATGTGCAAGAGCTTCTTGAGTTCATTTTTCCGAAGTCGCTGCAGCATC
CACTATCGACAGGCAGGCTATACGCATTCGCCCTGTACGGCCCGCTGGAC
TCCAACTCGGAGCTACGGTCTGGATACAACGGGCAACGGGTTGTAAGCAC
GTGGGAGATCGATACAATGTGCCTTCAATTCGAGCGTGAGGATATCTTAC
AGATGGGTGCCGTCAGTGATGACAACGCTACGGGGAAGCGAGATGGCAAG
GTGGATGTGCAAGAGCTTCTTGAGTTCATTTTTCCGAAGTCGCTGCAGCA
TCCACTATCGACAGGCAGGCTATACGCATTCGCCCTGTACGGCCCGCTGG
ACTCCAACTCGGAGCTACGGTCTGGATACAACGGGCAACGGGTTGTAAGC
ACGTGGGAGATCGATACAATGTGCCTTCAATTCGAGCGTGAGGATATCTT
ACAGGTCTACATTTCGGGCGGGAGGCCGTTGTTCGTCTTGAACGATGCCC
AGAAGGAAGAGGTCATCGCGCAGGCGGACAGCCACCTCAAGACGGCGAAA
GGCCGTGGCTATCGCCGACAAGTCACCCGAGGGGAGGTCGTCGACCTGCT
GTCAACGTTACCAAGAGATGCCTCGGGACTCGTGAGCTTTCATGACGCTC
AGAAGCTCATCATGGGATACCGAGAAAAGCAGATAGCACGATTCAAGGTC
ATTTTCCCCGAAATTGCCGGAGGAGCGGCTAGGAAGCAGGCGGGCCGGGC
TTCAAAATCTTGTGCGCATGGAAACATCGGCGGAGACGGAAAGACTCTGG
ACGGGGATGTAGGGCGTGGTGGTGGAGGCGATAGAAGTTGCGCTCTTGCG
GAGACCACGGTCGTCGGACGGGCTCAAGCTGGCAACGTTCTTGCATCGAC
TGAGAACATGTCAATAGGGTGCTCCGGCGGCGGCGGCGGGGCGAAAAGAA
GGGGCGGCAGGGCCAAGTTTAGCGCCGACGTTGCTCCGGCTGAGATGTTC
GTCAAGGACATGGGCTACACCCCAGCGGGCATAGCCAACCATGTCTACAT
TTCGGGCGGGAGGCCGTTGTTCGTCTTGAACGATGCCCAGAAGGAAGAGG
TCATCGCGCAGGCGGACAGCCACCTCAAGACGGCGAAAGGCCGTGGCTAT
CGCCGACAAGTCACCCGAGGGGAGGTCGTCGACCTGCTGTCAACGTTACC
AAGAGATGCCTCGGGACTCGTGAGCTTTCATGACGCTCAGAAGCTCATCA
TGGGATACCGAGAAAAGCAGATAGCACGATTCAAGGTCATTTTCCCCGAA
ATTGCCGGAGGAGCGGCTAGGAAGCAGGCGGGCCGGGCTTCAAAATCTTG
TGCGCATGGAAACATCGGCGGAGACGGAAAGACTCTGGACGGGGATGTAG
GGCGTGGTGGTGGAGGCGATAGAAGTTGCGCTCTTGCGGAGACCACGGTC
GTCGGACGGGCTCAAGCTGGCAACGTTCTTGCATCGACTGAGAACATGTC
AATAGGGTGCTCCGGCGGCGGCGGCGGGGCGAAAAGAAGGGGCGGCAGGG
CCAAGTTTAGCGCCGACGTTGCTCCGGCTGAGATGTTCGTCAAGGACATG
GGCTACACCCCAGCGGGCATAGCCAACCATACTAGCAAGCTCTTGAGCAC
TCGCGCGTACAAGGTCAGCAACATCGCTGATGGCAACGACCCCGGACTGA
CTCAAAACGTGAAGCTCATCCGAGATGACAGACAACCGGAGCAGGGGCAA
GGAACGTGGGACCCTTACGCTTGCCTGAGGGGGTACAACATCGGCGGTCA
CGTGCGGTCGGCGAGGAGCTCGACCACAGCCAAGCGCAAAGCCTGAACTA
GCAAGCTCTTGAGCACTCGCGCGTACAAGGTCAGCAACATCGCTGATGGC
AACGACCCCGGACTGACTCAAAACGTGAAGCTCATCCGAGATGACAGACA
ACCGGAGCAGGGGCAAGGAACGTGGGACCCTTACGCTTGCCTGAGGGGGT
ACAACATCGGCGGTCACGTGCGGTCGGCGAGGAGCTCGACCACAGCCAAG
CGCAAAGCCTGA
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