Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)
HSP 1 Score: 695 bits (1793), Expect = 1.120e-239
Identity = 388/423 (91.73%), Postives = 394/423 (93.14%), Query Frame = 1
Query: 1 VMDLCLLRNDPTGSLRYSQEEGLTKRNIERLPQTRYKRPVSGSAQKKGDKKTPASDGKKPDDTEAAAAGEEGGVTGSDLHGAPSSSTAAPKTAVVAGAEGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEAPAPITAAAAPGQA-LGGGGPARSGSTRSIRGAIVLPDQGGQPQEGSIVVQPAAAPSYVVVPREYSLGGDGIDEEHPGNGGEGPAGSSTRELASSSARASTTEGLPDDVARATDAAEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAXXXXXXXXXXXXXXXASGGAGPRL 1266
VMDLCLLRNDPTGSLRYSQEEGLTKR+IERLPQTRYKRPVSG+AQKKGDKKTPASDGKKPDDTEAAAAGEEGGVTGSDLHG P SSTAAPKTAVVAGAEGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEA PA SGSTRS RGAIVLPDQGGQPQ GSIVVQPA+APSYVVVPREYSLGGDGIDEE+PGNGGEG AGSSTRELASS+ARASTTEGLPDDVA+ATDA EEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREA XXXXXXXXXXXX ASGGAGPRL
Sbjct: 83 VMDLCLLRNDPTGSLRYSQEEGLTKRSIERLPQTRYKRPVSGTAQKKGDKKTPASDGKKPDDTEAAAAGEEGGVTGSDLHGPPGSSTAAPKTAVVAGAEGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEAXXXXXXXXXXXXXXFXXXXPAGSGSTRSTRGAIVLPDQGGQPQ-GSIVVQPASAPSYVVVPREYSLGGDGIDEEYPGNGGEGLAGSSTRELASSAARASTTEGLPDDVAQATDATEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAXXXXXXXXXXXXAASGGAGPRL 504
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)
HSP 1 Score: 693 bits (1788), Expect = 6.200e-236
Identity = 378/424 (89.15%), Postives = 388/424 (91.51%), Query Frame = 1
Query: 1 VMDLCLLRNDPTGSLRYSQEEGLTKRNIERLPQTRYKRPVSGSAQKKGDKKTPASDGKKPDDTEAAAAGEEGGVTGSDLHGAPSSSTAAPKTAVVAGAEGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEAPAPITAAAAPGQALGGGGPARSGSTRSIRGAIVLPDQGGQPQEGSIVVQPAAAPSYVVVPREYSLGGDGIDEEHPGNGGEGPAGSSTRELASSSARASTTEGLPDDVARATDAAEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAXXXXXXXXXXXXXXXAS--GGAGPRL 1266
VMDLCLLRNDPTGSLRYSQEEGLTKR+IERLP+TRYKRPVSGSAQKKG KKTPA+DGKKPD TEAAAAGEEGGVTGSDLHGAP+ T AP+TAVV AEGGE EGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDR+YRSVS+RLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEG EAEA PITA AAPGQA GGGGPARSGSTRS RGAIVLPDQGGQPQEGSIVVQPA+APSYVVVPREYSLGG GID EHPGNGGEGP GSS REL SSSARAS TE PD+VARATDA EEKEEIVAEA EERRGS KGFSDGRGGVVFGGNTEEFREA XXXXXX A+ GGAGPRL
Sbjct: 276 VMDLCLLRNDPTGSLRYSQEEGLTKRSIERLPETRYKRPVSGSAQKKGGKKTPAADGKKPDGTEAAAAGEEGGVTGSDLHGAPAGRTGAPQTAVVLAAEGGEREGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGVEAEATTPITADAAPGQAFGGGGPARSGSTRSTRGAIVLPDQGGQPQEGSIVVQPASAPSYVVVPREYSLGG-GIDNEHPGNGGEGPVGSSMRELTSSSARASATERPPDEVARATDATEEKEEIVAEAPEERRGSQKGFSDGRGGVVFGGNTEEFREAEAXXXXXXMAGARNGAAAIGGAGPRL 698
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)
HSP 1 Score: 84.7 bits (208), Expect = 7.610e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 301 GEGEGARDSTED-MCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANV 477
G+ EG R+ D MCAICL ++E GD+LR++P C H++HK C+DPWLETKA+C CK V
Sbjct: 237 GDVEGGREGVGDLMCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A8J5S5L1_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S5L1_ZIZPA)
HSP 1 Score: 81.3 bits (199), Expect = 1.700e-12
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 340 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVE 480
CA+CL+E+E GD+LR++P C H FH ECIDPWLET+ C C+AN+E
Sbjct: 128 CAVCLMEFEDGDDLRLLPHCSHAFHPECIDPWLETRVTCPLCRANLE 174
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A0P0YC54_ORYSJ (Os12g0620100 protein n=4 Tax=Oryza TaxID=4527 RepID=A0A0P0YC54_ORYSJ)
HSP 1 Score: 75.1 bits (183), Expect = 5.080e-12
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 340 CAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 486
CA+CL EYE GDELR +PGCGH FH+ C+D WL + C C+++ AR
Sbjct: 92 CAVCLAEYEDGDELRRLPGCGHAFHRRCVDEWLRRRPTCPVCRSSPPAR 140
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A3B6TN24_WHEAT (RING-type domain-containing protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6TN24_WHEAT)
HSP 1 Score: 77.8 bits (190), Expect = 5.280e-12
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 322 DSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVE 480
D E+ C +CL +E GD LR++P C H FH ECIDPWL+ +A C C+AN+E
Sbjct: 119 DEEEERCPVCLAVFEEGDNLRLLPHCSHVFHPECIDPWLQARATCPLCRANLE 171
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A0E0MPQ0_ORYPU (Uncharacterized protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0MPQ0_ORYPU)
HSP 1 Score: 78.2 bits (191), Expect = 9.460e-12
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 250 SSSTAAPKTAVVAGA-EGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 486
S S++AP+ A A A + G+G G CA+CL EYE GDELR +PGCGH FH+ C+D WL + C C+++ AR
Sbjct: 70 SCSSSAPEEAAAAAAIDVGDGTG--------CAVCLAEYEDGDELRPLPGCGHAFHRRCVDEWLRRRPTCPVCRSSPPAR 141
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A7S2EA99_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA99_TRICV)
HSP 1 Score: 74.3 bits (181), Expect = 1.640e-11
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 304 EGEGARDST----EDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCK 468
EGEGA S ED C ICLV+YE GDE+R +P CGH FHK+C+D WLE C C+
Sbjct: 1 EGEGAESSPALEEEDCCPICLVDYEGGDEVRTLP-CGHEFHKDCVDAWLENHTSCPACR 58
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A3B6MIZ0_WHEAT (RING-type domain-containing protein n=2 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6MIZ0_WHEAT)
HSP 1 Score: 73.2 bits (178), Expect = 2.690e-11
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 331 EDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 486
E CA+CL EY GDELR++PGC H FH+ C+D WL + C C+A+ ++R
Sbjct: 91 ERGCAVCLAEYADGDELRVMPGCAHTFHRRCVDQWLRRRPSCPLCRASSQSR 142
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Match:
A0A8I6WLA5_HORVV (RING-type domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WLA5_HORVV)
HSP 1 Score: 72.8 bits (177), Expect = 2.790e-11
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 331 EDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEAR 486
E CA+CL EY GDELR++PGC H FH+ C+D WL + C C+ + ++R
Sbjct: 88 ESGCAVCLAEYADGDELRVLPGCAHAFHRRCVDQWLRRRPSCPLCRTSPQSR 139
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1038.296.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.12e-239 / Id = 91.73 Expect = 6.20e-236 / Id = 89.15 Expect = 7.61e-14 / Id = 56.67 Expect = 1.70e-12 / Id = 61.70 Expect = 5.08e-12 / Id = 55.10 Expect = 5.28e-12 / Id = 52.83 Expect = 9.46e-12 / Id = 46.25 Expect = 1.64e-11 / Id = 55.93 Expect = 2.69e-11 / Id = 50.00 Expect = 2.79e-11 / Id = 48.08 Sequence D8LEX7_ECTSI A0A6H5KYP0_9PHAE A0A835ZK41_9STRA A0A8J5S5L1_ZIZPA A0A0P0YC54_ORYSJ A0A3B6TN24_WHEAT A0A0E0MPQ0_ORYPU A0A7S2EA99_TRICV A0A3B6MIZ0_WHEAT A0A8I6WLA5_HORVV
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1038.296.1
>prot_E-siliculosus-1a_F_contig1038.296.1 ID=prot_E-siliculosus-1a_F_contig1038.296.1|Name=mRNA_E-siliculosus-1a_F_contig1038.296.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=422bp
MDLCLLRNDPTGSLRYSQEEGLTKRNIERLPQTRYKRPVSGSAQKKGDKK TPASDGKKPDDTEAAAAGEEGGVTGSDLHGAPSSSTAAPKTAVVAGAEGG EGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAV CAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDV QLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGGEAEAPAPITAA AAPGQALGGGGPARSGSTRSIRGAIVLPDQGGQPQEGSIVVQPAAAPSYV VVPREYSLGGDGIDEEHPGNGGEGPAGSSTRELASSSARASTTEGLPDDV ARATDAAEEKEEIVAEAAEERRGSHKGFSDGRGGVVFGGNTEEFREAAAE AAAVAGARNGAAASGGAGPRL* back to top mRNA from alignment at E-siliculosus-1a_F_contig1038:34576..38456-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1038.296.1 ID=mRNA_E-siliculosus-1a_F_contig1038.296.1|Name=mRNA_E-siliculosus-1a_F_contig1038.296.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3881bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1038:34576..38456- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GTG ATGGACCTCTGCCTCCTACGGAACGATCCAACGGGCAGCCTACGCTA
CTCACAGGAGGAGGGGCTAACAAAGAGGAACATCGAGCGCCTCCCCCAGA
CTCGCTACAAGAGACCCGTCTCCGGCTCGGCTCAAAAAAAGGGAGACAAG
AAAACACCAGCTTCCGACGGCAAGAAGCCAGACGACACGGAAGCCGCGGC
GGCGGGAGAAGAGGGGGGGGTCACGGGATCGGATCTTCACGGGGCCCCCA
GCAGTAGTACGGCAGCGCCGAAGACCGCGGTTGTGGCGGGGGCGGAGGGC
GGGGAGGGGGAGGGGGCGCGGGATAGCACCGAAGACATGTGTGCTATCTG
TTTGGTGGAGTACGAGACCGGGGACGAGCTTCGAATCATCCCCGGGTGTG
GGCACAGGTTCCATAAG GTGCGTGTCTGGTGGGCTATGTATCGTTATTCG
GTCGTTGTTTGTGTTGTTTTTGGGCTAGCGGAAGGAATAGCCAGTGTGTT
AGTGATCTTGGTTCTTGGCCACTCTCTGAAGCTCACTTTTATTATTTCGC
ACGCAGCAAGCTGCACATACACGAACGGCCCGGCAGGAAAACAGGCGCAG
ACATGTTGGCGAGTATCTTTTAGAATGACCAGGATACAATACAATGATGA
CTTGGTGGCTATCTTACCCCCCTCGCCGAGTGAAAAAAGGACGAATAGAA
TGAAATCGCGGGAAAACTATCTTTCCAGTGCTATTGATATGTACTGTAAA
TAATGTCTTTGGTTTTATTTTGCTGGTCTTGTTTGGCGATCTAGTGAAAT
GAAATATCTCGCGAACATTGCGCTTCTCTCGTAAATACGCGTTGTGTGTG
TCAGGAATGCATCGACCCTTGGCTGGAGACGAAGGCCGTGTGTGCCTACT
GCAAGGCCAACGTGGAGGCACGAAGGACGTGCTGCGACCGCGTCTACCGA
TCGGTGTCTGATCGCTTGGGGATCAACCTGGTGGCGCCAACGACGATAAG
GTTTTCCAGCAGCCGCCGCACTTACACCAACGAAGAT GTGAGAGAAAAGA
GAGAAAAGAGGGGCGCGGGAAGAGTTCGTGGAATGAGAGTCTGCTGTTGT
TGTGATGCGCTTCCGTTTGTGTGTGTAATGTTAGCATCGTTCGCGCGAAC
CAGTTGACCAATGAAAAAGACGGGGGAGAGAAAAAGGATTTGTTTGGAGA
CGTGGAGGTGCTTACTGTAATGAGGGTAGTTTTCGTTGAATTTTTGTTTC
TTGCGCGTGCTGTCAGAAGTGCTCTTGCCGTGCTTTCAACTGTCAACCCA
GAAGGAAAGACCCCTCTCGGCCCCCGTCGCATCGCTTGTCCCCTTGACGC
AACACTCACTCTGTTGTGTACGTGTGCCGCACGCGTTATCGATCGCACGA
CTACAACCAATAGGTACAGCTCGCCATGGGACCGACCCTCCCCGCTTCCT
ACGGCCACTCCGAGATGGACTACGTGGGGTCGGCCGTCGCCCCGCGGCAG
GCTTCGGTGGACGTGGAGGCGGGAGAAGGGGGGGAGGCGGAAGCGCCAGC
GCCTATAACGGCAGCTGCGGCACCGGGGCAGGCGTTGGGGGGTGGAGGTC
CCGCACGATCAGGTTCGACGAGGTCAATCCGCGGGGCTATCGTTCTGCCG
GACCAGGGCGGCCAGCCGCAAGAGGGCTCCATCGTCGTGCAGCCCGCTGC
TGCGCCCAGCTACGTGGTAGTCCCGCGGGAGTACTCCTTGGGCGGCGACG
GAATCGACGAAGAGCATCCCGGTAACGGCGGGGAAGGGCCTGCCGGGAGT
TCGACGAGAGAGTTGGCCTCCTCGTCCGCCAGAGCTTCCACGACAGAGGG
CCTTCCCGACGATGTCGCGCGGGCGACGGACGCCGCGGAGGAGAAGGAGG
AGATAGTGGCGGAGGCGGCGGAAGAGAGACGCGGCAGCCACAAGGGCTTC
AGCGACGGCCGTGGGGGAGTGGTGTTCGGCGGCAACACGGAGGAGTTCCG
GGAGGCGGCGGCGGAGGCGGCGGCGGTGGCGGGGGCACGGAACGGGGCCG
CTGCCAGCGGAGGCGCGGGGCCTCGCTTGTAG GGCGTAGTGTCGTGTAAA
GAAGGGGCGGCGCGCGCACAAACGTTTGACGTGCTGCTGGTGTTTGTTTC
GCCACCGCTGCTGGACCTGAACAGGGGCTCCGAGTGTGTCCTTGTCCCAT
GCTTAATTCTGTTGCCATTTTTATCTGGTATCCACCGCGCGATGAACCGC
CGCTGACCAATCAAAAGCAACGCGAGGCGAGGCATAAAACGACTTGCTGC
TGCTTGATTTAGGCATGCGAGGGGATCGTGCGGACGAGTTGCTTTCGTTT
TTTGTGTGCGTGTCTGTCTGTCTTACGTGCGTGTTTTTTTTTTTTCTTGC
CGTCTGACTTTGACGGTGGTGGTAGTGGTTGTGATGATGAAGAGATAGAT
GGCCACGCTGTTTTTGGCTTGATCTTCGCCAGACAGGTGTTTTCGTCCAT
CATCCCGGCGCGAGAAGGCATGTTTTGTTTTTGCTCAAATGGGCCTGTTC
GACCGAGGACAACATTTTCTCTGCGTTGCGTTGTCTATTTCAGGCGCGCG
GGAGAGGGTTGTGGCTCTCACAGTAGTAGTAATACTGCTAGCGTGCGCGT
GTATCTGGGAAACGAGGGGGGAGGAGTACGCGGCATAGAGTGTTTCCGGC
ACACCCACCCCCCGCCCTTTGACTTTTTCACCGTGCTTGGTCTAGTATCG
ATGCGAGTAGTGCAGAATGACACGCGCTTGGTGCTGGAAGCACCGCTTGC
TTCGCTTTGTACCGCTTCATGCAAACGTGTTGTGTTGTCGTCTGGATGTT
TTCCTATCGAGTAGCGCACACCCGAGCGAGGAAGCAGGGTGCCAGCTTGC
CACACACAGCAGTCTGTAGGGAGTACTTTTTGGTGCATGGAGCGCTGCGT
CTTGTGACCGTTGTTGAAGAATCTAGTTTGATGCTGGTGTACAAGTATCT
TTGGATTATATACATATGAATGTGTACCTCAAGCACACTTGATGCGCGAA
GAGCTTAAGATGGCATCGTGCTCTCGCTCACGGTTCGTCTAGCCTCCCGT
GTTGTGTAACTGACGGTAGGAGTCCTCCTGTTGTTGTGTGTATGTGTTTT
TTTGTGGAAGCACAGCGGTCGCCGAGCTTCCAGTGTTTCTGTGGAAATCA
ATCTGCTGCTGCAGGTGGTGTATTGCTGTGTGTGTCGTTGTTGAGGAGGG
TAGTCGCATAATGTTTTTTGTTTTTTTGTGCTTTTTTCTTGTCGTGTAGC
CGGCCTTTGCGGCCCTCAACGTTTGACAAGTAGTTCCAGTTGCCTTGCGC
CCCCCTGTCCCCTATGTTTGCGGCTACCAACCAATCAGGTCCCGGGGATT
TGGTGGTGGTGGTGTCGTCTCCCTTGCATAAACCAAAAGTTTTGCTGTCT
ACATAATAACAAGCACGGTAGGCGCGGTTAAGATATTATTTTTCTCTTCG
TGTGGAATGGCGGGGCTATTCATCATCAAGTTTTTTGCAAGGACGACGTG
ACGCTCGCTTTTGCGTAGTTTTTTTTTCATGTTTTTTTGTTTTGTTTTGA
CTTTTCGTCCAGGATTAGTACAGTATAGGCAATGTATTGTAAGAATATAA
GCTCTCCAGGGAGGAGATTGACACAAACACAAACGCTTACGCGTATGAGT
GGAGAACGACGTGCTGTTTGTGATGATGGTGTCCCTACGGTCGTGACGTT
GTTGACCAGACGTTGTCAATTCGATTTGTTTAATAAAAGGTTGAGCGCAC
AAACAAGCCTTCGGGTTTTTTTGGCGCAAGCAACGCTGTCGTCGCGGCAG
ATTTTGAAGCTGGCAGGAATGAAAATTCTCG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1038:34576..38456-
>mRNA_E-siliculosus-1a_F_contig1038.296.1 ID=mRNA_E-siliculosus-1a_F_contig1038.296.1|Name=mRNA_E-siliculosus-1a_F_contig1038.296.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2532bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1038:34576..38456- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGGACCTCTGCCTCCTACGGAACGATCCAACGGGCAGCCTACGCTACTC ACAGGAGGAGGGGCTAACAAAGAGGAACATCGAGCGCCTCCCCCAGACTC GCTACAAGAGACCCGTCTCCGGCTCGGCTCAAAAAAAGGGAGACAAGAAA ACACCAGCTTCCGACGGCAAGAAGCCAGACGACACGGAAGCCGCGGCGGC GGGAGAAGAGGGGGGGGTCACGGGATCGGATCTTCACGGGGCCCCCAGCA GTAGTACGGCAGCGCCGAAGACCGCGGTTGTGGCGGGGGCGGAGGGCGGG GAGGGGGAGGGGGCGCGGGATAGCACCGAAGACATGTGTGCTATCTGTTT GGTGGAGTACGAGACCGGGGACGAGCTTCGAATCATCCCCGGGTGTGGGC ACAGGTTCCATAAGATGGACCTCTGCCTCCTACGGAACGATCCAACGGGC AGCCTACGCTACTCACAGGAGGAGGGGCTAACAAAGAGGAACATCGAGCG CCTCCCCCAGACTCGCTACAAGAGACCCGTCTCCGGCTCGGCTCAAAAAA AGGGAGACAAGAAAACACCAGCTTCCGACGGCAAGAAGCCAGACGACACG GAAGCCGCGGCGGCGGGAGAAGAGGGGGGGGTCACGGGATCGGATCTTCA CGGGGCCCCCAGCAGTAGTACGGCAGCGCCGAAGACCGCGGTTGTGGCGG GGGCGGAGGGCGGGGAGGGGGAGGGGGCGCGGGATAGCACCGAAGACATG TGTGCTATCTGTTTGGTGGAGTACGAGACCGGGGACGAGCTTCGAATCAT CCCCGGGTGTGGGCACAGGTTCCATAAGGAATGCATCGACCCTTGGCTGG AGACGAAGGCCGTGTGTGCCTACTGCAAGGCCAACGTGGAGGCACGAAGG ACGTGCTGCGACCGCGTCTACCGATCGGTGTCTGATCGCTTGGGGATCAA CCTGGTGGCGCCAACGACGATAAGGTTTTCCAGCAGCCGCCGCACTTACA CCAACGAAGATGAATGCATCGACCCTTGGCTGGAGACGAAGGCCGTGTGT GCCTACTGCAAGGCCAACGTGGAGGCACGAAGGACGTGCTGCGACCGCGT CTACCGATCGGTGTCTGATCGCTTGGGGATCAACCTGGTGGCGCCAACGA CGATAAGGTTTTCCAGCAGCCGCCGCACTTACACCAACGAAGATGTACAG CTCGCCATGGGACCGACCCTCCCCGCTTCCTACGGCCACTCCGAGATGGA CTACGTGGGGTCGGCCGTCGCCCCGCGGCAGGCTTCGGTGGACGTGGAGG CGGGAGAAGGGGGGGAGGCGGAAGCGCCAGCGCCTATAACGGCAGCTGCG GCACCGGGGCAGGCGTTGGGGGGTGGAGGTCCCGCACGATCAGGTTCGAC GAGGTCAATCCGCGGGGCTATCGTTCTGCCGGACCAGGGCGGCCAGCCGC AAGAGGGCTCCATCGTCGTGCAGCCCGCTGCTGCGCCCAGCTACGTGGTA GTCCCGCGGGAGTACTCCTTGGGCGGCGACGGAATCGACGAAGAGCATCC CGGTAACGGCGGGGAAGGGCCTGCCGGGAGTTCGACGAGAGAGTTGGCCT CCTCGTCCGCCAGAGCTTCCACGACAGAGGGCCTTCCCGACGATGTCGCG CGGGCGACGGACGCCGCGGAGGAGAAGGAGGAGATAGTGGCGGAGGCGGC GGAAGAGAGACGCGGCAGCCACAAGGGCTTCAGCGACGGCCGTGGGGGAG TGGTGTTCGGCGGCAACACGGAGGAGTTCCGGGAGGCGGCGGCGGAGGCG GCGGCGGTGGCGGGGGCACGGAACGGGGCCGCTGCCAGCGGAGGCGCGGG GCCTCGCTTGTAGGTACAGCTCGCCATGGGACCGACCCTCCCCGCTTCCT ACGGCCACTCCGAGATGGACTACGTGGGGTCGGCCGTCGCCCCGCGGCAG GCTTCGGTGGACGTGGAGGCGGGAGAAGGGGGGGAGGCGGAAGCGCCAGC GCCTATAACGGCAGCTGCGGCACCGGGGCAGGCGTTGGGGGGTGGAGGTC CCGCACGATCAGGTTCGACGAGGTCAATCCGCGGGGCTATCGTTCTGCCG GACCAGGGCGGCCAGCCGCAAGAGGGCTCCATCGTCGTGCAGCCCGCTGC TGCGCCCAGCTACGTGGTAGTCCCGCGGGAGTACTCCTTGGGCGGCGACG GAATCGACGAAGAGCATCCCGGTAACGGCGGGGAAGGGCCTGCCGGGAGT TCGACGAGAGAGTTGGCCTCCTCGTCCGCCAGAGCTTCCACGACAGAGGG CCTTCCCGACGATGTCGCGCGGGCGACGGACGCCGCGGAGGAGAAGGAGG AGATAGTGGCGGAGGCGGCGGAAGAGAGACGCGGCAGCCACAAGGGCTTC AGCGACGGCCGTGGGGGAGTGGTGTTCGGCGGCAACACGGAGGAGTTCCG GGAGGCGGCGGCGGAGGCGGCGGCGGTGGCGGGGGCACGGAACGGGGCCG CTGCCAGCGGAGGCGCGGGGCCTCGCTTGTAG back to top