prot_E-siliculosus-1a_F_contig1038.294.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1038.294.1
Unique Nameprot_E-siliculosus-1a_F_contig1038.294.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length69
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: D7G6M7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M7_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 5.720e-10
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MIRTSSLCLGLLGFALIMSPGSSGTSSTSCDSGYYASFQGNGYCDNALNNAECGYDGGDCCECTC 65
            M + SS  LG+LG A+++S  ++ + S+S   G + +  G+GYC    NNAECGYDGGDCCECTC
Sbjct:    1 MTKHSSRLLGVLGAAVVLSSVAANSLSSS---GCWDALYGDGYCTPPNNNAECGYDGGDCCECTC 62          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.590e-9
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MIRTSSLCLGLLGFALIMSPGSSGTSSTSCDSGYYASFQGNGYCDNALNNAECGYDGGDCCECTC 65
            M + SS  LG+LG A+++S  ++ + S+S   G + +  G+GYC    NNAECGYDGGDCCECTC
Sbjct:    1 MTKHSSRLLGVLGAAVVLSSVAANSLSSS---GCWDALYGDGYCTPPNNNAECGYDGGDCCECTC 62          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.850e-7
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0
Query:    7 LCLGLLGFALIMSPGSSGTSSTSCDSGYYASFQGNGYCDNALNNAECGYDGGDCCECTCV 66
            LC+G        +  ++GTSS   D     S  G+G CD  +N AECGYDGGDCCECTCV
Sbjct:   19 LCMGTGVHGATTTATNTGTSSVCFDE----SAVGDGNCDRDINFAECGYDGGDCCECTCV 74          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: D7FI82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI82_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 5.000e-7
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0
Query:   40 GNGYCDNALNNAECGYDGGDCCECTC 65
            GNGYC+   NNA+CGYDGGDCCECTC
Sbjct:   87 GNGYCNCQNNNADCGYDGGDCCECTC 112          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 5.320e-7
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 MIRTSSLCLGLLGFALIMSPGSSGTSSTSC-DSGYYASFQGNGYCDNALNNAECGYDGGDCCECTC 65
            M + SS  LG+LG A I+S      S  +C + G+     G+GYC    NNAECGYDGGDCCECTC
Sbjct:    1 MTKHSSRLLGVLGAAAILS------SVGACWEDGF-----GDGYCQLQNNNAECGYDGGDCCECTC 55          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 7.440e-7
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:   28 TSCDSGYYASFQGNGYCDNALNNAECGYDGGDCCECTCVD 67
            TS D+  Y   QG+G C+   N+A CGYDGGDCCEC+CVD
Sbjct:   92 TSSDAVCYEDVQGDGMCNEENNSAACGYDGGDCCECSCVD 131          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: A0A6H5K2J7_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J7_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 7.620e-7
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    1 MIRTSSLCLGLLGFALIMSPGSSGTSSTSCDSGYYASFQGNGYCDNALNNAECGYDGGDCCECTC 65
            M + SS  LG+LG A+ +S  S    S S D  +     G+G+C    NNAECGYDGGDCCECTC
Sbjct:    1 MTKHSSRLLGVLGAAVFLS--SVAAYSYSSDRCWEYEI-GDGFCTQHNNNAECGYDGGDCCECTC 62          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: A0A6H5K4R2_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R2_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 9.560e-7
Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 0
Query:   34 YYASFQGNGYCDNALNNAECGYDGGDCCECTC 65
            Y AS  GNG CD+ LNN EC YDGGDCCECTC
Sbjct:   50 YDASRIGNGACDSLLNNEECAYDGGDCCECTC 81          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.330e-6
Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    1 MIRTSS-LCLGLLGFALIM-SPGSSGTSSTS-----CDSGYYASFQGNGYCDNALNNAECGYDGGDCCECTCVD 67
            M++TSS   LGLLG A+IM S  SS  ++TS     CD+   A   GNG C+   N  ECG+DGGDCCECTC D
Sbjct:   56 MMKTSSNRWLGLLGAAVIMWSSASSVVATTSDQFDACDA---AQDIGNGRCNMGNNIEECGFDGGDCCECTCED 126          
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.370e-6
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0
Query:   31 DSGYYASFQGNGYCDNALNNAECGYDGGDCCECTCVDAL 69
            D G Y +  G+G+C +  NN  C YDGGDCCECTCVDA 
Sbjct:   66 DGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAF 104          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1038.294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M7_ECTSI5.720e-1050.77LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4F9_ECTSI2.590e-950.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L262_9PHAE3.850e-750.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FI82_ECTSI5.000e-780.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI87_ECTSI5.320e-751.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSC0_ECTSI7.440e-760.00Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5K2J7_9PHAE7.620e-750.77LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K4R2_9PHAE9.560e-775.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEP6_ECTSI1.330e-652.70Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE1.370e-658.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 23..61
e-value: 9.2E-4
score: 25.3
IPR000800Notch domainPFAMPF00066Notchcoord: 37..60
e-value: 2.4E-5
score: 24.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.776
IPR035993Notch-like domain superfamilySUPERFAMILY90193Notch domaincoord: 34..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1038contigE-siliculosus-1a_F_contig1038:25082..26293 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1038.294.1mRNA_E-siliculosus-1a_F_contig1038.294.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1038 25012..26293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1038.294.1 ID=prot_E-siliculosus-1a_F_contig1038.294.1|Name=mRNA_E-siliculosus-1a_F_contig1038.294.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=69bp
MIRTSSLCLGLLGFALIMSPGSSGTSSTSCDSGYYASFQGNGYCDNALNN
AECGYDGGDCCECTCVDAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035993Notch-like_dom_sf
IPR000800Notch_dom