Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1038.291.1 vs. uniprot
Match:
A0A6H5L0R8_9PHAE (ARID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R8_9PHAE)
HSP 1 Score: 266 bits (681), Expect = 6.750e-86
Identity = 164/181 (90.61%), Postives = 164/181 (90.61%), Query Frame = 0
Query: 1 MDERAVVALESLYSGPIKARELVRAREIFAFLRSNGQRAVLRDVPMVNGKLLDLVALLETITKRGGVRRVQDKGLWDEVTSELGLDSGQQTLFTISVHYKNFLYGFEQARQVHFPSRSSAGQXXXXXXXXXXXXXXXXXXXXVVPPMGRDQQHAG---VGTQRYEQHGHYQRQMRQRELEQ 178
MDERAV ALESLYSGPIKARELVRAREIFAFLRSNGQ VLRDVPMVNGKLLDLVALLETITKRGGVRRVQDKGLWDEVTSELGLDSGQQTLFTISVHYKNFLYGFEQ VHFPSRSSAGQ XXXXXXXXXXXXXX VVPPMGRDQ HAG VGTQRYEQHGHYQ QMRQRELEQ
Sbjct: 1 MDERAVAALESLYSGPIKARELVRAREIFAFLRSNGQGTVLRDVPMVNGKLLDLVALLETITKRGGVRRVQDKGLWDEVTSELGLDSGQQTLFTISVHYKNFLYGFEQ---VHFPSRSSAGQHQXXXXXXXXXXXXXX----VVPPMGRDQ-HAGMSGVGTQRYEQHGHYQGQMRQRELEQ 173
BLAST of mRNA_E-siliculosus-1a_F_contig1038.291.1 vs. uniprot
Match:
D8LEX2_ECTSI (ARID/BRIGHT DNA binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX2_ECTSI)
HSP 1 Score: 236 bits (602), Expect = 1.300e-73
Identity = 132/178 (74.16%), Postives = 132/178 (74.16%), Query Frame = 0
Query: 1 MDERAVVALESLYSGPIKARELVRAREIFAFLRSNGQRAVLRDVPMVNGKLLDLVALLETITKRGGVRRVQDKGLWDEVTSELGLDSGQQTLFTISVHYKNFLYGFEQARQVHFPSRSSAGQXXXXXXXXXXXXXXXXXXXXVVPPMGRDQQHAGVGTQRYEQHGHYQRQMRQRELEQ 178
MDERAV ALESLYSGPIKA ELVRAREIFAFLR NGQ AVLRDVPMVNGKLLDLVALLETITKRGGVRRVQDKGLWDEVTSELGLDSGQQTLFTISVHYKNFLYGFEQAR HAGVGTQRYEQHGHYQRQMRQRELEQ
Sbjct: 1 MDERAVAALESLYSGPIKAGELVRAREIFAFLRGNGQGAVLRDVPMVNGKLLDLVALLETITKRGGVRRVQDKGLWDEVTSELGLDSGQQTLFTISVHYKNFLYGFEQAR------------------------------------------HAGVGTQRYEQHGHYQRQMRQRELEQ 136
The following BLAST results are available for this feature:
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
50 100 150 200 250 300 350 Score = Score = Score = Expect = 5.2E-10 / Score = 49.3 Score = Expect = 1.3E-4 / Score = 28.4 Expect = 2.1E-11 / Score = 44.3 Score = 18.924 Expect = 5.3E-17 / Score = 63.4 Score = Sequence Coil Coil Coil SM01014 PTHR15348 SM00501 PF01388 PS51011 G3DSA:1.10.150.60 SSF46774
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 120..142 None No IPR available COILS Coil Coil coord: 226..247 None No IPR available COILS Coil Coil coord: 189..223 None No IPR available SMART SM01014 ARID_2 coord: 20..107 None No IPR available PANTHER PTHR15348 AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT coord: 27..300 IPR001606 ARID DNA-binding domain SMART SM00501 bright_3 coord: 19..112 IPR001606 ARID DNA-binding domain PFAM PF01388 ARID coord: 28..107 IPR001606 ARID DNA-binding domain PROSITE PS51011 ARID coord: 18..111 IPR036431 ARID DNA-binding domain superfamily GENE3D 1.10.150.60 coord: 9..140 IPR036431 ARID DNA-binding domain superfamily SUPERFAMILY 46774 ARID-like coord: 28..109
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1038.291.1 ID=prot_E-siliculosus-1a_F_contig1038.291.1|Name=mRNA_E-siliculosus-1a_F_contig1038.291.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=363bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: