mRNA_E-siliculosus-1a_F_contig10363.286.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10363.286.1
Unique NamemRNA_E-siliculosus-1a_F_contig10363.286.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A0D6E4V5_9GAMM (LuxR family transcriptional regulator n=3 Tax=Halomonas TaxID=2745 RepID=A0A0D6E4V5_9GAMM)

HSP 1 Score: 409 bits (1051), Expect = 6.390e-144
Identity = 217/220 (98.64%), Postives = 217/220 (98.64%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVVS 660
            MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEAD MEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIK HVTAILRKLGV SRTQAVIAAQKLEVEPPKVVS
Sbjct:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADXMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKXHVTAILRKLGVXSRTQAVIAAQKLEVEPPKVVS 220          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A0X8HBT8_9GAMM (Putative transcriptional regulatory protein NarL n=170 Tax=root TaxID=1 RepID=A0A0X8HBT8_9GAMM)

HSP 1 Score: 378 bits (971), Expect = 9.970e-132
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVVS 660
            MA A KFIVADDHPLFRAALTQALRQLAPQAEIVE+DTM AT +VV RHPDADLILLDLHMPGAHGFSGLIQLRGQ PDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSL LIAEAVGEIL GEVWLP+ LA+ + +++EEE+RFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV S
Sbjct:    1 MAFAQKFIVADDHPLFRAALTQALRQLAPQAEIVESDTMAATNEVVTRHPDADLILLDLHMPGAHGFSGLIQLRGQTPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLALIAEAVGEILDGEVWLPKELADAMGDSNEEETRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVES 220          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A5B8SS05_9GAMM (Response regulator transcription factor n=1 Tax=Pistricoccus aurantiacus TaxID=1883414 RepID=A0A5B8SS05_9GAMM)

HSP 1 Score: 370 bits (949), Expect = 2.240e-128
Identity = 193/220 (87.73%), Postives = 207/220 (94.09%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVVS 660
            MA+A KFIVADDHPLFRAALTQALRQLAP+AEI+EAD+M AT DVV RHPDADLILLDLHMPGAHGFSGLIQLRGQ PD+PVAVVSGSDEPYVVRRAIDYGASGFIPKSS+L+LIA+AVGEIL+GEVWLP  +A  L E +EEE++FA AIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLE+EPPKV S
Sbjct:    1 MALAQKFIVADDHPLFRAALTQALRQLAPRAEILEADSMAATNDVVIRHPDADLILLDLHMPGAHGFSGLIQLRGQAPDVPVAVVSGSDEPYVVRRAIDYGASGFIPKSSTLELIAKAVGEILEGEVWLPPDMAQSLGEVNEEETKFAAAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEIEPPKVES 220          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A0P7DIJ3_9GAMM (LuxR family transcriptional regulator n=11 Tax=Bacteria TaxID=2 RepID=A0A0P7DIJ3_9GAMM)

HSP 1 Score: 369 bits (948), Expect = 3.180e-128
Identity = 193/220 (87.73%), Postives = 207/220 (94.09%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVVS 660
            MA A KFIVADDHPLFRAALTQALRQ+A QAEIVEAD+MEAT +VV RHPDADLILLDLHMPGAHGFSGLIQLRGQ PDIPVAVVSGS+EPYVVRRAIDYGASGFIPKS+SL +IAEA+GEIL+GEVWLP  +A  + E+SE+ESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYEL+VSEATIKAHVTAILRKLGVHSRTQAVIAAQ+LEVEPPKV S
Sbjct:    1 MAFAQKFIVADDHPLFRAALTQALRQVASQAEIVEADSMEATNEVVARHPDADLILLDLHMPGAHGFSGLIQLRGQTPDIPVAVVSGSEEPYVVRRAIDYGASGFIPKSASLDVIAEAIGEILEGEVWLPTDIAEAMGESSEDESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELNVSEATIKAHVTAILRKLGVHSRTQAVIAAQRLEVEPPKVRS 220          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A1H2UP35_9GAMM (Two component transcriptional regulator, LuxR family n=2 Tax=Aidingimonas TaxID=1395977 RepID=A0A1H2UP35_9GAMM)

HSP 1 Score: 367 bits (942), Expect = 2.710e-127
Identity = 191/218 (87.61%), Postives = 204/218 (93.58%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV 654
            MA A KFIVADDHPLFRAALTQALRQ+APQAEIVE+DTM+AT DVV RHPDADLILLDLHMPGAHGFSGLIQLRGQ PDIPVAV+SGSDEP+VVRRAIDYG+SGFIPKS+SL LIAEAVGEIL GEVWLP  LA  L +  EEE+RFAEAIA+LTPQQFRVLNMLT+GLLNKQIA+EL+VSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV
Sbjct:    1 MAFAQKFIVADDHPLFRAALTQALRQVAPQAEIVESDTMDATIDVVLRHPDADLILLDLHMPGAHGFSGLIQLRGQSPDIPVAVISGSDEPHVVRRAIDYGSSGFIPKSASLSLIAEAVGEILDGEVWLPPELAETLGDVDEEEARFAEAIAALTPQQFRVLNMLTDGLLNKQIAFELNVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV 218          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: Q1QZ85_CHRSD (Two component transcriptional regulator, LuxR family n=9 Tax=Chromohalobacter TaxID=42054 RepID=Q1QZ85_CHRSD)

HSP 1 Score: 365 bits (936), Expect = 2.140e-126
Identity = 188/220 (85.45%), Postives = 206/220 (93.64%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVVS 660
            MA A KFIVADDHPLFRAAL QALRQ+APQAEIVEADTMEATTD+V RHPDADLILLDLHMPGAHGFSGLIQLRGQ P++PV V+SGS+EP VVRRAIDYGASGFIPKSSSL +IAEA+ ++L+GEVWLPE + ++L E++EEE+RFAEAIASLTPQQFRVLNML EGLLNKQIAYEL+VSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV S
Sbjct:    1 MAFAQKFIVADDHPLFRAALNQALRQVAPQAEIVEADTMEATTDMVLRHPDADLILLDLHMPGAHGFSGLIQLRGQSPEVPVVVISGSEEPPVVRRAIDYGASGFIPKSSSLDVIAEAIRQVLEGEVWLPEEMVDILGESNEEEARFAEAIASLTPQQFRVLNMLNEGLLNKQIAYELNVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKVES 220          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A086D250_9GAMM (LuxR family transcriptional regulator n=13 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A086D250_9GAMM)

HSP 1 Score: 362 bits (928), Expect = 3.680e-125
Identity = 187/218 (85.78%), Postives = 204/218 (93.58%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV 654
            MA A KFIVADDHPLFRAAL QALRQ++PQAEIVEADTMEATT+VV RHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPV VVSGS+E  VVRRAIDYGASGFIPKS+SL  IAEA+GE+L+GEVWLP  +A+ + E +EE++RFAEAIASLTPQQFRVLNMLTEGLLNKQIAYEL+VSEATIKAHVTAILRKLGVHSRTQAVIAAQKLE++PPKV
Sbjct:    1 MAFAQKFIVADDHPLFRAALNQALRQVSPQAEIVEADTMEATTEVVTRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVTVVSGSEELDVVRRAIDYGASGFIPKSASLDAIAEAIGEVLKGEVWLPAEMADAMGEGNEEDARFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELNVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEIDPPKV 218          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A1S1NUB5_9GAMM (DNA-binding response regulator n=2 Tax=Kushneria TaxID=504090 RepID=A0A1S1NUB5_9GAMM)

HSP 1 Score: 353 bits (906), Expect = 8.260e-122
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV 654
            MA A KFIVADDHPLFRAALTQ+LRQ+A  AEIVEADTM+AT D V RHPD DLILLDL MPGAHGFSGLIQLRGQMPDIPVAV+SGS+E +VVRRAIDYGASGFIPKS+SL +I+EA+GEIL GEVWLP A+A+ L + +EEE++FAEAIASLTPQQFRVLNMLTEGLLNKQIAY+L+VSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEV+PPK+
Sbjct:    1 MAFAQKFIVADDHPLFRAALTQSLRQVAANAEIVEADTMDATLDAVTRHPDVDLILLDLRMPGAHGFSGLIQLRGQMPDIPVAVISGSEEVHVVRRAIDYGASGFIPKSASLTVISEAIGEILDGEVWLPPAVADALGDGNEEEAKFAEAIASLTPQQFRVLNMLTEGLLNKQIAYDLNVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVDPPKI 218          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: UPI00046F9E5A (response regulator transcription factor n=1 Tax=Carnimonas nigrificans TaxID=64323 RepID=UPI00046F9E5A)

HSP 1 Score: 345 bits (884), Expect = 1.790e-118
Identity = 177/218 (81.19%), Postives = 198/218 (90.83%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV 654
            MA+A KFIVADDHPLFRAALTQAL  +  + +IVEADTMEATT+ V +H DADLILLDLHMPGAHGFSGLIQLRGQ+PDIPV VVSGS+EP+VVRRAIDYGASGFIPKS+SL +I +A+  +L GEVWLPE +A+ L E +EEESRFAEAIASLTPQQFRVLNML EGLLNKQIAY+L+VSEATIKAHVTAILRKLGVHSRTQAVIAAQ+LE+EPPKV
Sbjct:    1 MALAQKFIVADDHPLFRAALTQALANVVDKTDIVEADTMEATTEAVQQHSDADLILLDLHMPGAHGFSGLIQLRGQVPDIPVVVVSGSEEPHVVRRAIDYGASGFIPKSASLSVIGDAIRAVLDGEVWLPEHIADALGEANEEESRFAEAIASLTPQQFRVLNMLNEGLLNKQIAYDLNVSEATIKAHVTAILRKLGVHSRTQAVIAAQRLELEPPKV 218          
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Match: A0A2Z2H8Z7_9GAMM (DNA-binding response regulator n=7 Tax=Kushneria TaxID=504090 RepID=A0A2Z2H8Z7_9GAMM)

HSP 1 Score: 340 bits (873), Expect = 8.470e-117
Identity = 177/218 (81.19%), Postives = 195/218 (89.45%), Query Frame = 1
Query:    1 MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHPDADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDYGASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEAIASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPPKV 654
            MA A KFIVADDHPLFRAALTQ+LRQ+A  AEIVEADTMEAT +VV RHPDADLILLDL MPGAHGFSGLIQLRGQMPDIPVAV+SGS+EP VVRR++DYGASGFIPKS+SL  IA  +  IL GE+WLP  +A+ L +  EEE++FA AIASLTPQQFRVLNMLTEGLLNKQIAY+L+VSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEP +V
Sbjct:    1 MAFAQKFIVADDHPLFRAALTQSLRQVAANAEIVEADTMEATIEVVTRHPDADLILLDLRMPGAHGFSGLIQLRGQMPDIPVAVISGSEEPQVVRRSLDYGASGFIPKSASLDTIAGGISAILDGEIWLPPEMADYLGDGDEEEAKFAAAIASLTPQQFRVLNMLTEGLLNKQIAYDLNVSEATIKAHVTAILRKLGVHSRTQAVIAAQKLEVEPSRV 218          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10363.286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D6E4V5_9GAMM6.390e-14498.64LuxR family transcriptional regulator n=3 Tax=Halo... [more]
A0A0X8HBT8_9GAMM9.970e-13290.45Putative transcriptional regulatory protein NarL n... [more]
A0A5B8SS05_9GAMM2.240e-12887.73Response regulator transcription factor n=1 Tax=Pi... [more]
A0A0P7DIJ3_9GAMM3.180e-12887.73LuxR family transcriptional regulator n=11 Tax=Bac... [more]
A0A1H2UP35_9GAMM2.710e-12787.61Two component transcriptional regulator, LuxR fami... [more]
Q1QZ85_CHRSD2.140e-12685.45Two component transcriptional regulator, LuxR fami... [more]
A0A086D250_9GAMM3.680e-12585.78LuxR family transcriptional regulator n=13 Tax=Gam... [more]
A0A1S1NUB5_9GAMM8.260e-12283.49DNA-binding response regulator n=2 Tax=Kushneria T... [more]
UPI00046F9E5A1.790e-11881.19response regulator transcription factor n=1 Tax=Ca... [more]
A0A2Z2H8Z7_9GAMM8.470e-11781.19DNA-binding response regulator n=7 Tax=Kushneria T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10363contigE-siliculosus-1a_F_contig10363:18..680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size663
Model size663
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.K
EggNOG OGs1P4TD@1224,1RU35@1236,1XID0@135619,COG2197@1,COG2197@2
EggNOG free text desc.Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Seed eggNOG ortholog1380358.JADJ01000017_gene1427
Seed ortholog evalue2.6e-115
Seed ortholog score421.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927539.544295-CDS-E-siliculosus-1a_F_contig10363:17..6801622927539.544295-CDS-E-siliculosus-1a_F_contig10363:17..680Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10363 18..680 +
1696318575.297352-CDS-E-siliculosus-1a_F_contig10363:17..6801696318575.297352-CDS-E-siliculosus-1a_F_contig10363:17..680Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10363 18..680 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10363.286.1prot_E-siliculosus-1a_F_contig10363.286.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10363 18..680 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10363.286.1

>prot_E-siliculosus-1a_F_contig10363.286.1 ID=prot_E-siliculosus-1a_F_contig10363.286.1|Name=mRNA_E-siliculosus-1a_F_contig10363.286.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=221bp
MAVAHKFIVADDHPLFRAALTQALRQLAPQAEIVEADTMEATTDVVNRHP
DADLILLDLHMPGAHGFSGLIQLRGQMPDIPVAVVSGSDEPYVVRRAIDY
GASGFIPKSSSLQLIAEAVGEILQGEVWLPEALANVLEETSEEESRFAEA
IASLTPQQFRVLNMLTEGLLNKQIAYELSVSEATIKAHVTAILRKLGVHS
RTQAVIAAQKLEVEPPKVVS*
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mRNA from alignment at E-siliculosus-1a_F_contig10363:18..680+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10363.286.1 ID=mRNA_E-siliculosus-1a_F_contig10363.286.1|Name=mRNA_E-siliculosus-1a_F_contig10363.286.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=663bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10363:18..680+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAGTAGCTCATAAGTTTATCGTCGCTGACGATCACCCGCTGTTTCG TGCAGCGCTGACACAAGCGTTACGCCAATTAGCCCCCCAGGCGGAAATTG TCGAAGCGGATACCATGGAAGCCACCACTGATGTGGTGAATCGCCACCCA GATGCCGATTTGATTCTTCTCGACTTGCACATGCCAGGAGCCCATGGCTT CTCTGGTCTGATTCAGCTGCGTGGTCAGATGCCTGATATCCCCGTGGCGG TGGTGTCAGGCAGTGATGAGCCGTATGTGGTTCGTCGTGCTATTGACTAC GGCGCGTCGGGTTTTATCCCTAAATCATCGTCGCTACAATTAATTGCTGA GGCCGTAGGCGAGATTCTACAGGGCGAAGTATGGCTTCCAGAGGCCCTGG CTAATGTATTGGAAGAGACCAGTGAAGAGGAGTCGCGCTTTGCTGAGGCG ATTGCTTCACTAACGCCTCAGCAGTTTCGTGTTTTGAATATGCTAACGGA AGGCCTGCTGAACAAACAGATCGCTTACGAACTGAGTGTCTCTGAAGCAA CTATCAAGGCCCACGTGACTGCGATTCTACGTAAGTTAGGCGTGCATTCC CGTACCCAAGCGGTCATCGCTGCTCAGAAGCTGGAAGTCGAACCGCCTAA AGTAGTGTCTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10363:18..680+

>mRNA_E-siliculosus-1a_F_contig10363.286.1 ID=mRNA_E-siliculosus-1a_F_contig10363.286.1|Name=mRNA_E-siliculosus-1a_F_contig10363.286.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1326bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10363:18..680+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAGTAGCTCATAAGTTTATCGTCGCTGACGATCACCCGCTGTTTCG
TGCAGCGCTGACACAAGCGTTACGCCAATTAGCCCCCCAGGCGGAAATTG
TCGAAGCGGATACCATGGAAGCCACCACTGATGTGGTGAATCGCCACCCA
GATGCCGATTTGATTCTTCTCGACTTGCACATGCCAGGAGCCCATGGCTT
CTCTGGTCTGATTCAGCTGCGTGGTCAGATGCCTGATATCCCCGTGGCGG
TGGTGTCAGGCAGTGATGAGCCGTATGTGGTTCGTCGTGCTATTGACTAC
GGCGCGTCGGGTTTTATCCCTAAATCATCGTCGCTACAATTAATTGCTGA
GGCCGTAGGCGAGATTCTACAGGGCGAAGTATGGCTTCCAGAGGCCCTGG
CTAATGTATTGGAAGAGACCAGTGAAGAGGAGTCGCGCTTTGCTGAGGCG
ATTGCTTCACTAACGCCTCAGCAGTTTCGTGTTTTGAATATGCTAACGGA
AGGCCTGCTGAACAAACAGATCGCTTACGAACTGAGTGTCTCTGAAGCAA
CTATCAAGGCCCACGTGACTGCGATTCTACGTAAGTTAGGCGTGCATTCC
CGTACCCAAGCGGTCATCGCTGCTCAGAAGCTGGAAGTCGAACCGCCTAA
AGTAGTGTCTTAAATGGCAGTAGCTCATAAGTTTATCGTCGCTGACGATC
ACCCGCTGTTTCGTGCAGCGCTGACACAAGCGTTACGCCAATTAGCCCCC
CAGGCGGAAATTGTCGAAGCGGATACCATGGAAGCCACCACTGATGTGGT
GAATCGCCACCCAGATGCCGATTTGATTCTTCTCGACTTGCACATGCCAG
GAGCCCATGGCTTCTCTGGTCTGATTCAGCTGCGTGGTCAGATGCCTGAT
ATCCCCGTGGCGGTGGTGTCAGGCAGTGATGAGCCGTATGTGGTTCGTCG
TGCTATTGACTACGGCGCGTCGGGTTTTATCCCTAAATCATCGTCGCTAC
AATTAATTGCTGAGGCCGTAGGCGAGATTCTACAGGGCGAAGTATGGCTT
CCAGAGGCCCTGGCTAATGTATTGGAAGAGACCAGTGAAGAGGAGTCGCG
CTTTGCTGAGGCGATTGCTTCACTAACGCCTCAGCAGTTTCGTGTTTTGA
ATATGCTAACGGAAGGCCTGCTGAACAAACAGATCGCTTACGAACTGAGT
GTCTCTGAAGCAACTATCAAGGCCCACGTGACTGCGATTCTACGTAAGTT
AGGCGTGCATTCCCGTACCCAAGCGGTCATCGCTGCTCAGAAGCTGGAAG
TCGAACCGCCTAAAGTAGTGTCTTAA
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