prot_E-siliculosus-1a_F_contig149.2854.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig149.2854.1
Unique Name	prot_E-siliculosus-1a_F_contig149.2854.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	430

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: D7G093_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G093_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 2.230e-94
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0

Query:    1 MAANRLARSASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPEDEVVRPPPSSKFKSIIFDPTLKQKACRTCVKILIPQQEAIKASRGRG-GGGGISRLNGFLERKNTGGPHFAIVIVRAK 142
            MAANRLARSASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPEDEVVRPPPS+KFKSIIFDPTLKQKACRTCVKILIPQQEAIKASRGRG GGGGISRLNGFLERKNTGGPHF+I IVRAK
Sbjct:    1 MAANRLARSASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPEDEVVRPPPSNKFKSIIFDPTLKQKACRTCVKILIPQQEAIKASRGRGSGGGGISRLNGFLERKNTGGPHFSIAIVRAK 143

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: D8LCD5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD5_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 4.850e-46
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query:  352 MMVQKDGNLVLRKGKPGDPTPAPPVWESGRPDSKKNCPKCTVMLDETGQRLLVKDGRKVVGNFKIADDKVLSAAIKVR 429
            MMVQKDGNLVLRKGKPGDPTPAPPVWESGRPDSKKNCPKCTVMLDETGQRLLVKDGRKVVGNFKIADDKVLSAAIKVR
Sbjct:    1 MMVQKDGNLVLRKGKPGDPTPAPPVWESGRPDSKKNCPKCTVMLDETGQRLLVKDGRKVVGNFKIADDKVLSAAIKVR 78

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: A0A835YN18_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN18_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.650e-12
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0

Query:    9 SASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPEDEVVRPPPSSKFKSIIFDPTLKQKACRTCVKILIPQ 101
            S S +WV D+ + +C +C   F  N     A  +THCRYCGGV+C  CC + L +P ++VV+ P         FDP   Q+ C  C ++ + Q
Sbjct:    2 SNSSKWVLDTNLRECAVCLREFGTN--KPAASNKTHCRYCGGVYCRACCYECLSVPAEDVVQAPQEGPG----FDPAAPQRVCVRCAEVSLHQ 88

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: A0A1S3I9D4_LINUN (arrestin domain-containing protein A-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I9D4_LINUN)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-7
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0

Query:    2 AANRLARSASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPE 65
            AAN    S + RWV+D+EV  C +CSN+F         R + HCR CG V C+ CCSQ++ +P+
Sbjct:   27 AANNFVFSKA-RWVEDNEVSACKICSNKFN------QLRRKHHCRQCGRVLCSKCCSQKVPLPQ 83

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: A0A1S3IWH1_LINUN (vacuolar protein 8-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IWH1_LINUN)

HSP 1 Score: 60.8 bits (146), Expect = 2.350e-6
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0

Query:    2 AANRLARSASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPE 65
            AAN    S + RWV+D+EV  C +CSN+F         R + HCR CG V C+ CCSQ++ +P+
Sbjct:   27 AANNFVFSKA-RWVEDNEVSTCKICSNKFN------QLRRKHHCRQCGRVLCSKCCSQKVPLPQ 83

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: A0A2L2YR89_PARTP (FYVE-type domain-containing protein n=4 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YR89_PARTP)

HSP 1 Score: 56.6 bits (135), Expect = 4.990e-5
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0

Query:   14 WVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMP 64
            W+ D++V  CP+C ++F         R + HCR CG +FC+NCCSQ++ +P
Sbjct:   39 WLPDADVNTCPICDSKF------TAFRRKHHCRNCGRIFCSNCCSQKVPLP 83

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Match: A0A6A6E3P2_9PEZI (FYVE-domain-containing protein n=1 Tax=Zopfia rhizophila CBS 207.26 TaxID=1314779 RepID=A0A6A6E3P2_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 8.970e-5
Identity = 27/68 (39.71%), Postives = 34/68 (50.00%), Query Frame = 0

Query:   14 WVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGGVFCTNCCSQELYMPEDEVVRPPPSSKFKSII 81
            W  DS+V QCP+CSN F           + HCR CG V C  C    + +P   +VRPP  +   SII
Sbjct:  279 WQPDSDVRQCPVCSNPF------TWINRKHHCRKCGRVVCGTCSPHRITIPRQYIVRPPSETTAASII 340

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig149.2854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D7G093_ECTSI	2.230e-94	97.20	FYVE-type domain-containing protein n=1 Tax=Ectoca...	[more]
D8LCD5_ECTSI	4.850e-46	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YN18_9STRA	7.650e-12	36.56	FYVE-type domain-containing protein n=1 Tax=Tribon...	[more]
A0A1S3I9D4_LINUN	1.740e-7	43.75	arrestin domain-containing protein A-like n=1 Tax=...	[more]
A0A1S3IWH1_LINUN	2.350e-6	43.75	vacuolar protein 8-like n=1 Tax=Lingula unguis Tax...	[more]
A0A2L2YR89_PARTP	4.990e-5	41.18	FYVE-type domain-containing protein n=4 Tax=Parast...	[more]
A0A6A6E3P2_9PEZI	8.970e-5	39.71	FYVE-domain-containing protein n=1 Tax=Zopfia rhiz...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 133..230 e-value: 0.0071 score: 25.6
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 134..218 e-value: 1.1E-6 score: 28.8
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 134..215 score: 8.843
IPR000306	FYVE zinc finger	SMART	SM00064	fyve_4	coord: 9..100 e-value: 5.1E-6 score: 36.0
IPR000306	FYVE zinc finger	PFAM	PF01363	FYVE	coord: 13..96 e-value: 9.1E-14 score: 51.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 4..106 e-value: 1.0E-12 score: 49.6
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 133..254 e-value: 3.0E-13 score: 51.9
IPR036426	Bulb-type lectin domain superfamily	GENE3D	2.90.10.10		coord: 331..422 e-value: 4.7E-5 score: 25.4
None	No IPR available	PANTHER	PTHR23164:SF13	E3 UBIQUITIN-PROTEIN LIGASE PIB1	coord: 10..106
None	No IPR available	PANTHER	PTHR23164	EARLY ENDOSOME ANTIGEN 1	coord: 10..106
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..304
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 305..322
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 323..429
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 135..249
IPR017455	Zinc finger, FYVE-related	PROSITE	PS50178	ZF_FYVE	coord: 17..99 score: 9.49
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 13..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig149	contig	E-siliculosus-1a_F_contig149:44884..53145 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig149.2854.1	mRNA_E-siliculosus-1a_F_contig149.2854.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig149 44380..53221 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig149.2854.1 ID=prot_E-siliculosus-1a_F_contig149.2854.1|Name=mRNA_E-siliculosus-1a_F_contig149.2854.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=430bp
MAANRLARSASKRWVDDSEVPQCPLCSNRFEGNFLDITARGRTHCRYCGG
VFCTNCCSQELYMPEDEVVRPPPSSKFKSIIFDPTLKQKACRTCVKILIP
QQEAIKASRGRGGGGGISRLNGFLERKNTGGPHFAIVIVRAKSLIGRKAN
SPVVDPVCLLTVGNTSSITQPTQIGSDPVWDQCFDFPVPGEHGNSLKLTC
YEEQAGGKTLIGEGSTKVVETGLEGMWVPITDERRSVTGEVLIRCTYKGA
RTARPAALGGLGSSKSSLSYRQSSSAGFRSSDGGDMEDEDEESLPVLRWL
QEKAWLVYVVLLLLSVLYRFSLQGGFSGEPISLRPGAPIANNAFTRSDTH
YMMVQKDGNLVLRKGKPGDPTPAPPVWESGRPDSKKNCPKCTVMLDETGQ
RLLVKDGRKVVGNFKIADDKVLSAAIKVR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR017455	Znf_FYVE-rel
IPR036426	Bulb-type_lectin_dom_sf
IPR035892	C2_domain_sf
IPR013083	Znf_RING/FYVE/PHD
IPR000306	Znf_FYVE
IPR000008	C2_dom