prot_E-siliculosus-1a_F_contig1036.284.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1036.284.1
Unique Nameprot_E-siliculosus-1a_F_contig1036.284.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length292
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1036.284.1 vs. uniprot
Match: A0A6H5J9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z1_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 1.150e-96
Identity = 205/275 (74.55%), Postives = 208/275 (75.64%), Query Frame = 0 
Query:   49 DADSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAKVGKRKPSVLAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------NFGMPGLQQQTAPGSGSSRLFSDGSSGGGAIDPNGMAVGGARGGVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGSSASMTF 292
            D DSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAKVGKRKPS+LAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                     +FGMPGLQQQ AP SGSS+LFSDGSSGGGAIDPNGMAVGGARGGVSP                           SGRGSSASMTF
Sbjct:   41 DTDSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAKVGKRKPSILAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQGKQMLLMQEWVPSDAAPPRVMSACLPLAQPDGGGGHFGMPGLQQQAAPASGSSQLFSDGSSGGGAIDPNGMAVGGARGGVSPGLVGGGGAPYDAHGIDDGIPGLSPSPGSGRGSSASMTF 315
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BLAST of mRNA_E-siliculosus-1a_F_contig1036.284.1 vs. uniprot
Match: D7FLC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC3_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 2.460e-65
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 
Query:   62 MKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAK 158
            MKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAK
Sbjct:    1 MKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAK 97
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1036.284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J9Z1_9PHAE1.150e-9674.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLC3_ECTSI2.460e-65100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1036contigE-siliculosus-1a_F_contig1036:21989..24180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1036.284.1mRNA_E-siliculosus-1a_F_contig1036.284.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1036 17651..24180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1036.284.1 ID=prot_E-siliculosus-1a_F_contig1036.284.1|Name=mRNA_E-siliculosus-1a_F_contig1036.284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=292bp
MRSGRSLPGGGGGGGGGGGGAGNSNNKIVVSNNNTTGGGGGGNGGNGGDA
DSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRA
RAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDV
SCQPAKAKVGKRKPSVLAAQQKEDTAAQRLAAQQQQQQQHFQRQQQQVFM
QPDGGGGNFGMPGLQQQTAPGSGSSRLFSDGSSGGGAIDPNGMAVGGARG
GVSPGLAGGGGAPYDGHGIDDGMPGLSPSPGSGRGSSASMTF
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