prot_E-siliculosus-1a_F_contig1036.282.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1036.282.1
Unique Nameprot_E-siliculosus-1a_F_contig1036.282.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length967
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1036.282.1 vs. uniprot
Match: A0A6H5KZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH1_9PHAE)

HSP 1 Score: 753 bits (1945), Expect = 8.410e-262
Identity = 492/572 (86.01%), Postives = 503/572 (87.94%), Query Frame = 0 
Query:    1 MSLRELLGLNDAEHRPQQTCAPPSTALNLQRSLVPAGAAATGPARSRSSSSSRESGDTARRLNTGESWREEEQRRIQGMDPGGRGGGGAGQVPDGCGVATSAFVHRQQQPPASGSEAHGQQGXVVWXXXXXDWATGASSRDQLNREFXXXXXXXXXXXXXXEARHRXXXXXXXXXXXXXXXGQQFLSEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESASGVGRVSHNPSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXKEGEAGSKQELVALKAGHGVAVDHLNMLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKKDTTSKVPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAADRASDEDQLVPLCTIAARPTFVRTRKRPAKGITRPRDPLSPRSAKAAAEIAEAEARV 572
            MSLRELLGLNDAE RPQQ CAPP+T LNLQRSLVPAG AA+GPARSRSSSSSRESGDTARRLNTGESWREEE RRIQ MDPGGRGGGG+GQVPDGCGVATSAF HRQQQPPASGSEAHGQQG VVW     DWATGAS+RDQLNREF   XXXXXXXXXXX     XXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ESASGVGR+SHNPSPSP   XXXXXXXXXXXXXXXXXX                    D   EG+AG+KQELVALKAGHGVAVDHLNMLV LVEEMTHKWERQLDDGGEGGWDD MLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISK+DTTSK+PRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAA RASDEDQLVPLCTIAARPTFVRTRKRPAKGI RPRDP SPRSAKAAAEIAEAEA++
Sbjct:    1 MSLRELLGLNDAEPRPQQICAPPATGLNLQRSLVPAGGAASGPARSRSSSSSRESGDTARRLNTGESWREEEHRRIQRMDPGGRGGGGSGQVPDGCGVATSAFAHRQQQPPASGSEAHGQQGGVVWRGGGVDWATGASNRDQLNREFLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-------ESASGVGRISHNPSPSPPPLXXXXXXXXXXXXXXXXXXQENKTLKKEQHQRRKEGAAADKTHEGQAGNKQELVALKAGHGVAVDHLNMLVSLVEEMTHKWERQLDDGGEGGWDDGMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKEDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAAGRASDEDQLVPLCTIAARPTFVRTRKRPAKGIARPRDPPSPRSAKAAAEIAEAEAQM 565
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BLAST of mRNA_E-siliculosus-1a_F_contig1036.282.1 vs. uniprot
Match: D7FLC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.070e-13
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:  322 MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT 356
            MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT
Sbjct:    1 MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT 35
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1036.282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZH1_9PHAE8.410e-26286.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLC1_ECTSI1.070e-13100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 264..284
NoneNo IPR availableCOILSCoilCoilcoord: 183..220
NoneNo IPR availableCOILSCoilCoilcoord: 140..160
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 608..803
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 17..184
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 608..803
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 17..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1036contigE-siliculosus-1a_F_contig1036:3491..8730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1036.282.1mRNA_E-siliculosus-1a_F_contig1036.282.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1036 3268..10164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1036.282.1 ID=prot_E-siliculosus-1a_F_contig1036.282.1|Name=mRNA_E-siliculosus-1a_F_contig1036.282.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=967bp
MSLRELLGLNDAEHRPQQTCAPPSTALNLQRSLVPAGAAATGPARSRSSS
SSRESGDTARRLNTGESWREEEQRRIQGMDPGGRGGGGAGQVPDGCGVAT
SAFVHRQQQPPASGSEAHGQQGGVVWRGGGGDWATGASSRDQLNREFLLQ
QQQQQQHQQQLEARHRWEQHHRQIKESQEKQGQQFLSEVARKYQQQKQQQ
QQQQQQQQQQQQQQQQQQQQHHHHQQQLQQHHQRESASGVGRVSHNPSPS
PPPFQQHQHHQQHQKQQQRQRQQEKKSLKKEQHQRRKEGAAADKKKEGEA
GSKQELVALKAGHGVAVDHLNMLVGLVEEMTHKWERQLDDGGEGGWDDDM
LAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQ
GLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFI
SKKDTTSKVPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDL
RHSPDRPGRVGKQAADRASDEDQLVPLCTIAARPTFVRTRKRPAKGITRP
RDPLSPRSAKAAAEIAEAEARVYEERQGMQLLLQQSAADSSATGKQNPKV
NRASGNAHAAGSPPLAQAGGVGAVAEGPRLQQKKQRNNTTSVERAASEAA
KRAEVWAAASDAAAAAAAAAAAAKGSVVASASTTARWSSHRPPTGGPARG
LASVPHQVEWQSQGDACTAGSQGRQHGRPVVSEGSSPPVPPTANLHALHV
AANAVSDGAAGRPPPSSQDPAVEQRRHFASSSSFSRQQQHQQQQQQQQRQ
QHSYPQPAVPAGPPHPNRPATVTYIHMGGPSVEAANDGNGAVTAASNPSR
SLRAATGVERAGIGDVRGAGLGASGGSSNSVGSGGAGVGATAVGGPPTWS
RAEEYGATGGGAVPDRPPPQRADVSLAPPSRFEARPPAPAVSGVTVLGFG
TIAAGAILQRPPTSES*
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