mRNA_E-siliculosus-1a_F_contig14831.2820.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14831.2820.1
Unique NamemRNA_E-siliculosus-1a_F_contig14831.2820.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A0F9YRW9_9ZZZZ (Lactamase_B domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9YRW9_9ZZZZ)

HSP 1 Score: 612 bits (1578), Expect = 8.770e-214
Identity = 297/348 (85.34%), Postives = 318/348 (91.38%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVRTQLLLA LMAAAVL+AFGRVAPAAPLINLIAVPWVSS+MVPTALLGWLLSP+P + H +WWLFE AL VFH LLT++ +QWPLWEPDR LTYPLAFALLLMSLCWGLPAVLPGLRV S + V+ LPWW+LS+++PQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLW PGQ+FDQVIVSHADNDHAGGV  LLADHQVDQW+ PLGEQLP+ A  CQRGQ WQRDGV+YRILWPPAG N  SANDRSCVLEVS G+ RLLITGDVST+IERRFLLEVE PLSVLVAGHHGS TSSGIQFVRH APEHVIFSAGR+N FQHPVDPVVRRFR
Sbjct:  369 WALVRTQLLLAPLMAAAVLIAFGRVAPAAPLINLIAVPWVSSIMVPTALLGWLLSPIPWLSHGVWWLFEVALSVFHFLLTVSVKQWPLWEPDRLLTYPLAFALLLMSLCWGLPAVLPGLRVASASLVITLPWWSLSKDAPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWPPGQQFDQVIVSHADNDHAGGVSALLADHQVDQWMLPLGEQLPLIASPCQRGQTWQRDGVNYRILWPPAGANAFSANDRSCVLEVSTGQQRLLITGDVSTEIERRFLLEVEPPLSVLVAGHHGSATSSGIQFVRHVAPEHVIFSAGRENPFQHPVDPVVRRFR 716          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A651D7K2_HALSX (DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651D7K2_HALSX)

HSP 1 Score: 609 bits (1570), Expect = 1.380e-212
Identity = 295/348 (84.77%), Postives = 320/348 (91.95%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVRTQLLLA LMAAAVLVAFGRVAPAAPLINL+AVPWVSSVMVPTALLGW LSP+P VG  LWWLFE AL++FH LLTL+ QQWPLWEPD+PLTYPLA ALLL+SLCWGLPAVLPGLR+ STA VV LPWW+LS + P G V VSV DVGQGQLIELRS+NYRLLYDTGPRFRGGFMPL+TLW+PGQ FDQVIVSHADNDHAGGV  LL DHQVD+W+APLGEQLP+ A+ CQRGQAW+RDG++YRILWPPAG+NTLSANDRSCVLEVS GE RLLITGDVST+IERRFLLE+E PLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDN+F+HPVD VVRRFR
Sbjct:  368 WALVRTQLLLAPLMAAAVLVAFGRVAPAAPLINLLAVPWVSSVMVPTALLGWFLSPLPFVGQALWWLFEIALNIFHFLLTLSVQQWPLWEPDQPLTYPLALALLLVSLCWGLPAVLPGLRLASTALVVTLPWWSLSPSIPHGVVRVSVADVGQGQLIELRSKNYRLLYDTGPRFRGGFMPLQTLWAPGQHFDQVIVSHADNDHAGGVRALLDDHQVDRWMAPLGEQLPVTANVCQRGQAWRRDGINYRILWPPAGINTLSANDRSCVLEVSIGEQRLLITGDVSTEIERRFLLEIEPPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNAFRHPVDSVVRRFR 715          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A101D5U3_9GAMM (ComEC-type competence protein n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D5U3_9GAMM)

HSP 1 Score: 607 bits (1564), Expect = 1.120e-211
Identity = 297/348 (85.34%), Postives = 315/348 (90.52%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVRTQLLLA LMAAAVLVAFGRVAPAAPLINL+AVPWVSSVMVPTALLGWLLSP+PLVGH LWWLFE AL VFH LLTL  Q WPLWEPDRPLTYPLAFALLL+SLCWGLPAVLPGLR+ +TA VVALPWW+LS + P GA+ VSV+DVGQGQLIELRS+NYRLLYDTGPRFRGGFMPLETLWSPGQ FDQVIVSHADNDHAGG+  LLADHQV QW+AP GE LP+ + ACQRGQAWQRDGV+YR LWPPAG N  SANDRSCVLEVS GE RLLITGDVST+IERRFLLEVE P+SVLVAGHHGS TSSGIQFVRHT+PE VIFSAGR N FQHPVDPVVRRFR
Sbjct:  368 WALVRTQLLLAPLMAAAVLVAFGRVAPAAPLINLLAVPWVSSVMVPTALLGWLLSPLPLVGHALWWLFEQALGVFHLLLTLAVQHWPLWEPDRPLTYPLAFALLLLSLCWGLPAVLPGLRLAATALVVALPWWSLSPSIPHGALRVSVHDVGQGQLIELRSKNYRLLYDTGPRFRGGFMPLETLWSPGQHFDQVIVSHADNDHAGGIEALLADHQVKQWVAPAGEPLPVTSRACQRGQAWQRDGVNYRFLWPPAGNNAFSANDRSCVLEVSVGEQRLLITGDVSTEIERRFLLEVEPPVSVLVAGHHGSATSSGIQFVRHTSPEQVIFSAGRHNPFQHPVDPVVRRFR 715          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A0D5M4X8_9GAMM (DNA internalization-related competence protein ComEC/Rec2 n=5 Tax=Halomonas TaxID=2745 RepID=A0A0D5M4X8_9GAMM)

HSP 1 Score: 598 bits (1542), Expect = 2.410e-208
Identity = 287/348 (82.47%), Postives = 318/348 (91.38%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVR+QLLLA LMAAAVLVAFGR+APAAPLINL+AVPWVSS+MVPTALLGWLLSPVP +GH LWWLFEAAL++FH LL+L+ Q WPLWEPDRPLTYPLAFALLL+SLCWGLPAVLPG+R+ +TA VVALPWW+L   +PQ  + VSV+DVGQGQLIELRS++YRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGV  LLA+HQV+QW+AP GE L + + ACQRGQ WQRDGV+YR LWPPAG N LS NDRSCVLEVS GEHRLLITGDVS++IERRFLLEV+SP+S+LVAGHHGSGTSSGIQFVRHTAPEHV+FSAGRDN FQHP D VVRRFR
Sbjct:  368 WALVRSQLLLAPLMAAAVLVAFGRIAPAAPLINLVAVPWVSSIMVPTALLGWLLSPVPFLGHALWWLFEAALNIFHLLLSLSVQHWPLWEPDRPLTYPLAFALLLLSLCWGLPAVLPGMRLATTALVVALPWWSLLSTTPQQGLRVSVHDVGQGQLIELRSKHYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVNALLAEHQVNQWIAPEGETLSVDSRACQRGQTWQRDGVNYRFLWPPAGANALSPNDRSCVLEVSVGEHRLLITGDVSSEIERRFLLEVDSPVSMLVAGHHGSGTSSGIQFVRHTAPEHVVFSAGRDNPFQHPGDAVVRRFR 715          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: UPI001F0DC515 (DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0DC515)

HSP 1 Score: 594 bits (1532), Expect = 7.860e-207
Identity = 285/348 (81.90%), Postives = 315/348 (90.52%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WAL+R+QLLLA LMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVP+ALLGWLLSPVP + H++WWLFE AL +FH LLTL+ Q WPLWEP+RPLTYPLAFALLL+SLCWGLPAVLP +R+ STA VVALPWW+LS ++PQ  + VSVYDVGQGQLIELRS NYRLLYDTGPRFRGGFMPLE+LWSPGQRFDQVIVSHADNDHAGGV  LL +HQV++W AP GE LP+A+ ACQRGQ+WQRDGV+YR LWPPAG N LS NDRSCVLEV  GEHRLLITGDVST+IERRFLLEV++P+S+LVAGHHGS TSSGIQFVRHTA EHV+FSAGRDN FQHPVD VVRRFR
Sbjct:  368 WALIRSQLLLAPLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPSALLGWLLSPVPFLAHSVWWLFELALTIFHILLTLSVQHWPLWEPERPLTYPLAFALLLLSLCWGLPAVLPSIRLASTALVVALPWWSLSSSTPQQGLRVSVYDVGQGQLIELRSANYRLLYDTGPRFRGGFMPLESLWSPGQRFDQVIVSHADNDHAGGVNALLTEHQVNEWTAPAGETLPVASQACQRGQSWQRDGVNYRFLWPPAGANALSPNDRSCVLEVRVGEHRLLITGDVSTEIERRFLLEVDAPISILVAGHHGSSTSSGIQFVRHTASEHVVFSAGRDNPFQHPVDSVVRRFR 715          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A0D6E9Y9_9GAMM (Competence protein ComA n=3 Tax=Halomonas TaxID=2745 RepID=A0A0D6E9Y9_9GAMM)

HSP 1 Score: 584 bits (1505), Expect = 1.060e-202
Identity = 285/348 (81.90%), Postives = 307/348 (88.22%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVR+QLLLA LMAAAVLVAFGR APAAPLINL+AVPWVSSVMVP+ALLGWLLSP+P VG  LWWLFE ALDVFH LL L  Q WPLWEPDRPLTYPLAFALLL+SLCWGLPAVLPGLR+ +TA V+ALPWW+L  + P   + VSVYDVGQGQLIELRSE+YRLLYDTGPRFR GFMPLETLWSPGQRFDQVIVSHADNDHAGG+  LLADH+V QW+AP GE LP+++H CQRGQ WQRDGV+YRILWPPAG N  SANDRSCVLEVS GE RLLITGDV T +ERRFL EVE P+SVLVAGHHGSGTSSGIQFVRH AP HVIFSAGR N+FQHPVD VVRRFR
Sbjct:  371 WALVRSQLLLAPLMAAAVLVAFGRXAPAAPLINLVAVPWVSSVMVPSALLGWLLSPIPGVGEALWWLFEQALDVFHLLLALAVQHWPLWEPDRPLTYPLAFALLLLSLCWGLPAVLPGLRLSATALVLALPWWSLPSSIPPNTLRVSVYDVGQGQLIELRSEHYRLLYDTGPRFRSGFMPLETLWSPGQRFDQVIVSHADNDHAGGIRALLADHRVRQWMAPAGEALPVSSHDCQRGQRWQRDGVNYRILWPPAGDNDFSANDRSCVLEVSVGEQRLLITGDVGTQVERRFLGEVERPVSVLVAGHHGSGTSSGIQFVRHAAPRHVIFSAGRGNAFQHPVDDVVRRFR 718          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A2A3XGA0_9GAMM (DNA internalization-related competence protein ComEC/Rec2 n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XGA0_9GAMM)

HSP 1 Score: 580 bits (1496), Expect = 2.520e-201
Identity = 280/348 (80.46%), Postives = 309/348 (88.79%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WAL+RTQLLLA LMAAAVLVAFGRVAP APLINL+AVPWVSS+MVPTALLGWLL+P PLVGH  WW+FEAAL+VFH LLTL++QQWPLWEPDR LTYPLAFALLL+SLCWGLP +LP LR++STA +V+LPWW+L+    QG + VSV+DVGQGQLIELRS+NYRLLYD GPRFRGGFMPLETLWSPGQRFDQVI+SHADNDHAGGV  LL+DHQV+QWLAPLGE LP+ + AC RGQAW+RDGV +RILWP AG NTLSANDRSCVLEVS GEHRLLITGDV  DIERR L +V SP+SVLVAGHHGS TSSGIQFVRHT P HVIFSAG+ N FQHP D VVRRFR
Sbjct:  372 WALIRTQLLLAPLMAAAVLVAFGRVAPMAPLINLVAVPWVSSIMVPTALLGWLLAPFPLVGHVAWWIFEAALNVFHLLLTLSSQQWPLWEPDRLLTYPLAFALLLLSLCWGLPGILPVLRLLSTALIVSLPWWSLAPPFAQGVIRVSVHDVGQGQLIELRSQNYRLLYDAGPRFRGGFMPLETLWSPGQRFDQVIISHADNDHAGGVEALLSDHQVNQWLAPLGESLPVPSVACARGQAWERDGVGFRILWPHAGANTLSANDRSCVLEVSVGEHRLLITGDVGADIERRLLQDVRSPVSVLVAGHHGSRTSSGIQFVRHTTPRHVIFSAGKSNQFQHPADQVVRRFR 719          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A1J8P542_9GAMM (DNA internalization-related competence protein ComEC/Rec2 n=5 Tax=Halomonas TaxID=2745 RepID=A0A1J8P542_9GAMM)

HSP 1 Score: 580 bits (1494), Expect = 5.050e-201
Identity = 283/348 (81.32%), Postives = 308/348 (88.51%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVR+QLLLA LMAAAVLVAFGRVAPAAPLINL+AVPWVSSVMVPTALLGWLLS +P+VG  LWWLFE AL VFH LLTL  Q WPLWEPDR LTYPLAFALLL+SLCWGLPAVLPGLR+ +TA V+ALPWW+LS + PQ  + VSV+DVGQGQ+IELRSE+YRLLYDTGPRFR GFMPLETLWSPGQ+FDQVIVSHADNDHAGG+  LLADH+V QW+AP GE LP++   CQRGQ WQ DGV YRILWPPAG N LSANDRSCVLEVS GE RLLITGD  T++ERRFL EVE P+SVLVAGHHGSGTSSG+QFVRHTAPEHVIFSAGR N+FQHPVD VVRRFR
Sbjct:  372 WALVRSQLLLAPLMAAAVLVAFGRVAPAAPLINLVAVPWVSSVMVPTALLGWLLSLLPMVGEALWWLFEQALSVFHLLLTLAVQHWPLWEPDRSLTYPLAFALLLLSLCWGLPAVLPGLRLAATALVLALPWWSLSSSIPQNTLKVSVHDVGQGQVIELRSEHYRLLYDTGPRFRSGFMPLETLWSPGQKFDQVIVSHADNDHAGGIGALLADHRVSQWMAPAGEGLPVSGIDCQRGQKWQHDGVSYRILWPPAGDNDLSANDRSCVLEVSVGEQRLLITGDGGTEVERRFLREVELPVSVLVAGHHGSGTSSGVQFVRHTAPEHVIFSAGRSNAFQHPVDSVVRRFR 719          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A1A9R0D6_9GAMM (DNA internalization-related competence protein ComEC/Rec2 n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9R0D6_9GAMM)

HSP 1 Score: 577 bits (1488), Expect = 3.960e-200
Identity = 281/348 (80.75%), Postives = 308/348 (88.51%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVR+QLLLA LMAAAVL+AFGRVAPAAPLINL+AVPWVSSVMVPTALLGWLLSPVPLVG ++WWLFE AL VFH LLTL  Q WPLWEPDR LTYPLAFALLL+SLCWGLPAVLPGLR+ +TA  +ALPWW+LS + P   + VSVYDVGQGQL+ELRSE+YRLLYDTGPRFR GFMPLETLWSPGQ+FDQVIVSHADNDHAGG+  LLADH+V QW+AP GE LP+++  CQRGQ WQRDGV YRILWPPAG N  SANDRSCVLEVS GE RLL+TGDV T+IERRFL +V  P++VLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGR N+F HPVD VVRRFR
Sbjct:  371 WALVRSQLLLAPLMAAAVLMAFGRVAPAAPLINLVAVPWVSSVMVPTALLGWLLSPVPLVGDSVWWLFEQALSVFHLLLTLAVQHWPLWEPDRSLTYPLAFALLLLSLCWGLPAVLPGLRLAATALALALPWWSLSSSIPPNTLRVSVYDVGQGQLVELRSEHYRLLYDTGPRFRSGFMPLETLWSPGQQFDQVIVSHADNDHAGGIGALLADHRVSQWVAPKGEALPVSSIDCQRGQRWQRDGVRYRILWPPAGENDFSANDRSCVLEVSIGEQRLLVTGDVGTEIERRFLSKVALPVNVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRRNAFHHPVDSVVRRFR 718          
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Match: A0A0C3DY10_9GAMM (Competence protein ComEC n=11 Tax=Halomonadaceae TaxID=28256 RepID=A0A0C3DY10_9GAMM)

HSP 1 Score: 573 bits (1477), Expect = 1.890e-198
Identity = 281/348 (80.75%), Postives = 306/348 (87.93%), Query Frame = 1
Query:    1 WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALLGWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLAFALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYDVGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHADNDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRILWPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLSVLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR 1044
            WALVR+QLLLA LMAAAVLVAFGRVAPAAPLINL+AVPWVSSVMVPTALLGWLLSP+P+VG T+WWLFE AL VFH LLTL  Q WPLWEPDR LTYPL+ ALLL+SLCWGLPAVLP LR+ ++A +VALPWW+L  + P  A+ VSV+DVGQGQLIELRS +YRLLYDTGPRFR GFMPLE LWSPGQ FDQV+VSHADNDHAGG+  LLADH+V QW+AP GE LPI+   CQRGQ WQRDGV YRILWPPAG N LSANDRSCVLEVSAGE RLLITGDVST++ERRFL EVE P+SVLVAGHHGSGTSSGIQFVR  APEHVIFSAGR N+FQHPVD VVRRFR
Sbjct:  372 WALVRSQLLLAPLMAAAVLVAFGRVAPAAPLINLVAVPWVSSVMVPTALLGWLLSPLPMVGETVWWLFEQALSVFHLLLTLVVQHWPLWEPDRSLTYPLSLALLLLSLCWGLPAVLPSLRLAASALIVALPWWSLPSSIPPNALRVSVHDVGQGQLIELRSAHYRLLYDTGPRFRSGFMPLEALWSPGQLFDQVLVSHADNDHAGGISALLADHRVKQWMAPAGEALPISGIDCQRGQTWQRDGVSYRILWPPAGDNDLSANDRSCVLEVSAGEQRLLITGDVSTEVERRFLREVEPPVSVLVAGHHGSGTSSGIQFVRSIAPEHVIFSAGRSNAFQHPVDSVVRRFR 719          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14831.2820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9YRW9_9ZZZZ8.770e-21485.34Lactamase_B domain-containing protein n=1 Tax=mari... [more]
A0A651D7K2_HALSX1.380e-21284.77DNA internalization-related competence protein Com... [more]
A0A101D5U3_9GAMM1.120e-21185.34ComEC-type competence protein n=1 Tax=Halomonas sp... [more]
A0A0D5M4X8_9GAMM2.410e-20882.47DNA internalization-related competence protein Com... [more]
UPI001F0DC5157.860e-20781.90DNA internalization-related competence protein Com... [more]
A0A0D6E9Y9_9GAMM1.060e-20281.90Competence protein ComA n=3 Tax=Halomonas TaxID=27... [more]
A0A2A3XGA0_9GAMM2.520e-20180.46DNA internalization-related competence protein Com... [more]
A0A1J8P542_9GAMM5.050e-20181.32DNA internalization-related competence protein Com... [more]
A0A1A9R0D6_9GAMM3.960e-20080.75DNA internalization-related competence protein Com... [more]
A0A0C3DY10_9GAMM1.890e-19880.75Competence protein ComEC n=11 Tax=Halomonadaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14831contigE-siliculosus-1a_F_contig14831:2..1045 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1044
Model size1044
Exons1
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00002,ko02044
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EggNOG OGs1MUKF@1224,1RMW6@1236,1XHZN@135619,COG0658@1,COG0658@2,COG2333@1,COG2333@2
EggNOG free text desc.DNA internalization-related competence protein ComEC Rec2
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
KEGG ModuleM00429
KEGG TC3.A.11.1,3.A.11.2
KEGG koko:K02238
Preferred nameycaI
Seed eggNOG ortholog1504981.KO116_0850
Seed ortholog evalue1.6e-167
Seed ortholog score595.5
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927995.4117165-CDS-E-siliculosus-1a_F_contig14831:1..10451622927995.4117165-CDS-E-siliculosus-1a_F_contig14831:1..1045Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14831 2..1045 -
1696318766.0069945-CDS-E-siliculosus-1a_F_contig14831:1..10451696318766.0069945-CDS-E-siliculosus-1a_F_contig14831:1..1045Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14831 2..1045 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14831.2820.1prot_E-siliculosus-1a_F_contig14831.2820.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14831 2..1045 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14831.2820.1

>prot_E-siliculosus-1a_F_contig14831.2820.1 ID=prot_E-siliculosus-1a_F_contig14831.2820.1|Name=mRNA_E-siliculosus-1a_F_contig14831.2820.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=348bp
WALVRTQLLLALLMAAAVLVAFGRVAPAAPLINLIAVPWVSSVMVPTALL
GWLLSPVPLVGHTLWWLFEAALDVFHSLLTLTAQQWPLWEPDRPLTYPLA
FALLLMSLCWGLPAVLPGLRVVSTAFVVALPWWTLSQNSPQGAVSVSVYD
VGQGQLIELRSENYRLLYDTGPRFRGGFMPLETLWSPGQRFDQVIVSHAD
NDHAGGVVGLLADHQVDQWLAPLGEQLPIAAHACQRGQAWQRDGVHYRIL
WPPAGVNTLSANDRSCVLEVSAGEHRLLITGDVSTDIERRFLLEVESPLS
VLVAGHHGSGTSSGIQFVRHTAPEHVIFSAGRDNSFQHPVDPVVRRFR
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mRNA from alignment at E-siliculosus-1a_F_contig14831:2..1045-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14831.2820.1 ID=mRNA_E-siliculosus-1a_F_contig14831.2820.1|Name=mRNA_E-siliculosus-1a_F_contig14831.2820.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1044bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14831:2..1045- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGCATTGGTGAGAACACAGTTACTGTTGGCTCTATTAATGGCCGCCGC AGTGTTAGTAGCCTTTGGCAGGGTGGCGCCAGCCGCGCCGTTGATTAATT TAATCGCTGTACCATGGGTGAGTTCTGTGATGGTGCCGACAGCGCTATTG GGTTGGCTATTATCCCCCGTACCGTTGGTGGGCCATACGCTTTGGTGGCT ATTCGAAGCTGCACTTGACGTATTTCATTCCCTGCTGACATTAACTGCTC AACAGTGGCCGCTCTGGGAGCCTGATCGGCCTTTAACCTATCCATTGGCT TTCGCTTTGCTGCTCATGTCACTGTGTTGGGGGCTGCCTGCGGTATTGCC TGGATTGCGGGTTGTATCTACCGCATTTGTCGTTGCTCTTCCGTGGTGGA CGCTATCTCAAAACTCTCCCCAAGGGGCGGTAAGCGTCAGCGTATACGAT GTAGGGCAAGGGCAGTTGATAGAGTTGCGTAGTGAAAACTATCGTCTCCT TTACGACACTGGGCCGCGCTTTCGCGGTGGTTTTATGCCCTTAGAGACGT TGTGGTCACCAGGACAACGGTTTGACCAAGTCATTGTGAGTCACGCTGAT AATGATCATGCAGGGGGTGTTGTTGGCTTATTGGCTGATCATCAGGTTGA TCAGTGGCTGGCGCCTCTGGGCGAACAACTGCCCATAGCTGCCCACGCCT GTCAGCGTGGACAAGCGTGGCAACGGGATGGCGTGCATTATCGCATTCTT TGGCCGCCCGCTGGCGTTAATACATTATCTGCCAATGATCGATCCTGTGT CTTAGAAGTAAGCGCAGGCGAGCATCGATTACTGATCACTGGCGACGTAA GTACTGATATTGAACGTCGCTTTTTGCTAGAGGTCGAGTCGCCTCTAAGC GTTTTAGTGGCCGGGCATCACGGTAGTGGCACCAGTTCCGGGATTCAATT TGTACGCCATACTGCACCTGAACATGTCATTTTTAGCGCGGGTCGAGACA ATTCTTTTCAACATCCGGTTGACCCAGTGGTACGCCGTTTTCGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14831:2..1045-

>mRNA_E-siliculosus-1a_F_contig14831.2820.1 ID=mRNA_E-siliculosus-1a_F_contig14831.2820.1|Name=mRNA_E-siliculosus-1a_F_contig14831.2820.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2088bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14831:2..1045- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGCATTGGTGAGAACACAGTTACTGTTGGCTCTATTAATGGCCGCCGC
AGTGTTAGTAGCCTTTGGCAGGGTGGCGCCAGCCGCGCCGTTGATTAATT
TAATCGCTGTACCATGGGTGAGTTCTGTGATGGTGCCGACAGCGCTATTG
GGTTGGCTATTATCCCCCGTACCGTTGGTGGGCCATACGCTTTGGTGGCT
ATTCGAAGCTGCACTTGACGTATTTCATTCCCTGCTGACATTAACTGCTC
AACAGTGGCCGCTCTGGGAGCCTGATCGGCCTTTAACCTATCCATTGGCT
TTCGCTTTGCTGCTCATGTCACTGTGTTGGGGGCTGCCTGCGGTATTGCC
TGGATTGCGGGTTGTATCTACCGCATTTGTCGTTGCTCTTCCGTGGTGGA
CGCTATCTCAAAACTCTCCCCAAGGGGCGGTAAGCGTCAGCGTATACGAT
GTAGGGCAAGGGCAGTTGATAGAGTTGCGTAGTGAAAACTATCGTCTCCT
TTACGACACTGGGCCGCGCTTTCGCGGTGGTTTTATGCCCTTAGAGACGT
TGTGGTCACCAGGACAACGGTTTGACCAAGTCATTGTGAGTCACGCTGAT
AATGATCATGCAGGGGGTGTTGTTGGCTTATTGGCTGATCATCAGGTTGA
TCAGTGGCTGGCGCCTCTGGGCGAACAACTGCCCATAGCTGCCCACGCCT
GTCAGCGTGGACAAGCGTGGCAACGGGATGGCGTGCATTATCGCATTCTT
TGGCCGCCCGCTGGCGTTAATACATTATCTGCCAATGATCGATCCTGTGT
CTTAGAAGTAAGCGCAGGCGAGCATCGATTACTGATCACTGGCGACGTAA
GTACTGATATTGAACGTCGCTTTTTGCTAGAGGTCGAGTCGCCTCTAAGC
GTTTTAGTGGCCGGGCATCACGGTAGTGGCACCAGTTCCGGGATTCAATT
TGTACGCCATACTGCACCTGAACATGTCATTTTTAGCGCGGGTCGAGACA
ATTCTTTTCAACATCCGGTTGACCCAGTGGTACGCCGTTTTCGCTGGGCA
TTGGTGAGAACACAGTTACTGTTGGCTCTATTAATGGCCGCCGCAGTGTT
AGTAGCCTTTGGCAGGGTGGCGCCAGCCGCGCCGTTGATTAATTTAATCG
CTGTACCATGGGTGAGTTCTGTGATGGTGCCGACAGCGCTATTGGGTTGG
CTATTATCCCCCGTACCGTTGGTGGGCCATACGCTTTGGTGGCTATTCGA
AGCTGCACTTGACGTATTTCATTCCCTGCTGACATTAACTGCTCAACAGT
GGCCGCTCTGGGAGCCTGATCGGCCTTTAACCTATCCATTGGCTTTCGCT
TTGCTGCTCATGTCACTGTGTTGGGGGCTGCCTGCGGTATTGCCTGGATT
GCGGGTTGTATCTACCGCATTTGTCGTTGCTCTTCCGTGGTGGACGCTAT
CTCAAAACTCTCCCCAAGGGGCGGTAAGCGTCAGCGTATACGATGTAGGG
CAAGGGCAGTTGATAGAGTTGCGTAGTGAAAACTATCGTCTCCTTTACGA
CACTGGGCCGCGCTTTCGCGGTGGTTTTATGCCCTTAGAGACGTTGTGGT
CACCAGGACAACGGTTTGACCAAGTCATTGTGAGTCACGCTGATAATGAT
CATGCAGGGGGTGTTGTTGGCTTATTGGCTGATCATCAGGTTGATCAGTG
GCTGGCGCCTCTGGGCGAACAACTGCCCATAGCTGCCCACGCCTGTCAGC
GTGGACAAGCGTGGCAACGGGATGGCGTGCATTATCGCATTCTTTGGCCG
CCCGCTGGCGTTAATACATTATCTGCCAATGATCGATCCTGTGTCTTAGA
AGTAAGCGCAGGCGAGCATCGATTACTGATCACTGGCGACGTAAGTACTG
ATATTGAACGTCGCTTTTTGCTAGAGGTCGAGTCGCCTCTAAGCGTTTTA
GTGGCCGGGCATCACGGTAGTGGCACCAGTTCCGGGATTCAATTTGTACG
CCATACTGCACCTGAACATGTCATTTTTAGCGCGGGTCGAGACAATTCTT
TTCAACATCCGGTTGACCCAGTGGTACGCCGTTTTCGC
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