Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot
Match: A0A6H5L505_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L505_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 9.640e-21 Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0 Query: 59 EESDLRSPTGARRAPGFQETPEHQPSGVTAEASVVADKDALADELGQEVKRLREQGRELEA 119
EESDLRSPTGAR APGFQETP+ Q SGVTA+ASVVADKD LADELGQEVKRLREQ RELEA
Sbjct: 1066 EESDLRSPTGARHAPGFQETPKQQLSGVTAKASVVADKDTLADELGQEVKRLREQLRELEA 1126
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5L505_9PHAE | 9.640e-21 | 88.52 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 93..120 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..33 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 34..120 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 4..15 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..3 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 16..33 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..23
score: 0.585 |
| None | No IPR available | TMHMM | TMhelix | | coord: 5..27 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig10355.280.1 ID=prot_E-siliculosus-1a_F_contig10355.280.1|Name=mRNA_E-siliculosus-1a_F_contig10355.280.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=120bp
CQSIGGCLHTFALFLVVGHFSSHMLITPPAAIRTTCRPQGTPSFQTPSLE
DARGCKAGEESDLRSPTGARRAPGFQETPEHQPSGVTAEASVVADKDALA
DELGQEVKRLREQGRELEAE back to top
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