prot_E-siliculosus-1a_F_contig10355.280.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10355.280.1
Unique Nameprot_E-siliculosus-1a_F_contig10355.280.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length120
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot
Match: A0A6H5L505_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L505_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 9.640e-21
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:   59 EESDLRSPTGARRAPGFQETPEHQPSGVTAEASVVADKDALADELGQEVKRLREQGRELEA 119
            EESDLRSPTGAR APGFQETP+ Q SGVTA+ASVVADKD LADELGQEVKRLREQ RELEA
Sbjct: 1066 EESDLRSPTGARHAPGFQETPKQQLSGVTAKASVVADKDTLADELGQEVKRLREQLRELEA 1126
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10355.280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L505_9PHAE9.640e-2188.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.585
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10355contigE-siliculosus-1a_F_contig10355:168..1980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10355.280.1mRNA_E-siliculosus-1a_F_contig10355.280.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10355 168..1980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10355.280.1 ID=prot_E-siliculosus-1a_F_contig10355.280.1|Name=mRNA_E-siliculosus-1a_F_contig10355.280.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=120bp
CQSIGGCLHTFALFLVVGHFSSHMLITPPAAIRTTCRPQGTPSFQTPSLE
DARGCKAGEESDLRSPTGARRAPGFQETPEHQPSGVTAEASVVADKDALA
DELGQEVKRLREQGRELEAE
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