mRNA_E-siliculosus-1a_F_contig14769.2782.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A1A9QYQ3_9GAMM (DUF2157 domain-containing protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9QYQ3_9GAMM) HSP 1 Score: 258 bits (659), Expect = 7.580e-84 Identity = 129/158 (81.65%), Postives = 139/158 (87.97%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M T RRELVSLIEQ IPP+QV RAV A L PS RAW VFIDRLLLWLGGLAL FAVLFF+AYNWAEMGRWLRFGVVQAA+ LA+GV VWGK +P V+RVALT ASLLVGVLLALFGQVYQTGADPWQLFF WAVLT+PW W+ARF+LLWV+WLGLL
Sbjct: 1 MATTRRELVSLIEQSVIPPDQVTRAVTTAGLHPSARAWTVFIDRLLLWLGGLALAFAVLFFVAYNWAEMGRWLRFGVVQAAIVLAMGVTVWGKASPTVKRVALTAASLLVGVLLALFGQVYQTGADPWQLFFSWAVLTLPWVWVARFELLWVLWLGLL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A654B646_9GAMM (DUF2157 domain-containing protein n=10 Tax=Halomonas TaxID=2745 RepID=A0A654B646_9GAMM) HSP 1 Score: 257 bits (656), Expect = 2.090e-83 Identity = 125/158 (79.11%), Postives = 142/158 (89.87%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RREL+ LIEQG IPPEQV RAV+ + L PSPRAW +FIDRLLLWLGGLAL FAVLFFIAYNWAEMGRWLRFGVVQAA+ LA+G+AVW K +PMV+RVALT+A+LLVGVLLALFGQVYQTGADPWQLFF WA+L +PW W+ARF+LLWV+WLGLL
Sbjct: 1 MASTRRELIPLIEQGVIPPEQVTRAVQASGLHPSPRAWALFIDRLLLWLGGLALAFAVLFFIAYNWAEMGRWLRFGVVQAAMVLAVGIAVWPKASPMVQRVALTSATLLVGVLLALFGQVYQTGADPWQLFFTWALLALPWVWVARFELLWVLWLGLL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A265E343_9GAMM (DUF2157 domain-containing protein n=1 Tax=Halomonas boliviensis LC1 TaxID=1072583 RepID=A0A265E343_9GAMM) HSP 1 Score: 254 bits (649), Expect = 2.410e-82 Identity = 124/158 (78.48%), Postives = 141/158 (89.24%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RREL+SLIEQG IPPEQVARA++VA LRPSPRAW VFIDR+LLWLGGLA+ FAVLFFIAYNWAEM W RFG+VQAA LA+ VA+W K +PMV RVALT+A+LLVGVLLALFGQVYQTGADPWQLFF WAV+T+PW W+ARF+LLWV+WLGLL
Sbjct: 1 MASTRRELISLIEQGVIPPEQVARAIQVAELRPSPRAWAVFIDRMLLWLGGLAMAFAVLFFIAYNWAEMSHWARFGLVQAASVLAVVVAIWPKASPMVSRVALTSATLLVGVLLALFGQVYQTGADPWQLFFTWAVMTLPWVWVARFELLWVLWLGLL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A0C3I827_9GAMM (DUF2157 domain-containing protein n=3 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A0C3I827_9GAMM) HSP 1 Score: 254 bits (648), Expect = 3.110e-82 Identity = 124/154 (80.52%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 13 RRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
RREL+ LIEQG IPPEQV RAV+ + L PSPRAW +FIDRLLLWLGGLAL FAVLFFIAYNWAEMGRWLRFGVVQAA+ LA+ VA+W K +PMV+RVALT+A+LL+GVLLALFGQVYQTGADPWQLFF WAVLT+PW W+ARF+LLWV+WLGLL
Sbjct: 2 RRELIPLIEQGVIPPEQVTRAVQASGLHPSPRAWALFIDRLLLWLGGLALAFAVLFFIAYNWAEMGRWLRFGVVQAAMVLAVVVAIWPKYSPMVQRVALTSATLLLGVLLALFGQVYQTGADPWQLFFTWAVLTLPWVWVARFELLWVLWLGLL 155
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A2G2L545_HALSX (DUF2157 domain-containing protein n=3 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A2G2L545_HALSX) HSP 1 Score: 253 bits (645), Expect = 9.740e-82 Identity = 124/158 (78.48%), Postives = 142/158 (89.87%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RREL+SLIEQG IPPEQ+ RAV+ + L PSPRAW +FIDRLLLWLGGLAL FAVLFFIAYNW EMGRWLRFGVVQAA+ LA+ VAVW K +PMV+RVALT+A+LLVGVLLALFGQVYQTGADPWQLFF WA+L++PW W+ARF+LLWV+WLGLL
Sbjct: 1 MASTRRELISLIEQGVIPPEQMTRAVQTSGLHPSPRAWALFIDRLLLWLGGLALAFAVLFFIAYNWVEMGRWLRFGVVQAAIVLAVVVAVWPKVSPMVQRVALTSATLLVGVLLALFGQVYQTGADPWQLFFSWALLSLPWVWVARFELLWVLWLGLL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A0F9YYU8_9ZZZZ (DUF2157 domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9YYU8_9ZZZZ) HSP 1 Score: 253 bits (645), Expect = 9.740e-82 Identity = 128/158 (81.01%), Postives = 141/158 (89.24%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RRELVSLI+QGAIPPE VARAVKVA+L PS RAW VFIDRLLLWLG LA+ FAVLFF+AYNWA+M RWLRFG+VQAAL A+GVAVW + PM+ RVALT ASLLVGVLLALFGQVYQTGADPWQLFFIWAV T+PWAW+ARF+LLWVMWLGLL
Sbjct: 1 MASSRRELVSLIDQGAIPPEHVARAVKVAQLHPSARAWAVFIDRLLLWLGVLAVTFAVLFFVAYNWADMARWLRFGLVQAALVSAVGVAVWRRANPMLVRVALTMASLLVGVLLALFGQVYQTGADPWQLFFIWAVFTLPWAWVARFELLWVMWLGLL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A0D6ED48_9GAMM (DUF2157 domain-containing protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A0D6ED48_9GAMM) HSP 1 Score: 251 bits (642), Expect = 2.770e-81 Identity = 124/158 (78.48%), Postives = 138/158 (87.34%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M RRELV+LIEQG IPPEQV R V+VA L PSPRAW VFIDRLLLWLGGLAL FAVLFF+AYNWAEMGRWLRF +VQ A+ LA+G+AVWGK +P VRRVALT ASLLVGVLLAL GQVYQTGAD WQLFF WA+LT+PW W+ARF+LLWV+WLG+L
Sbjct: 1 MAAARRELVALIEQGVIPPEQVVRGVEVAGLHPSPRAWAVFIDRLLLWLGGLALAFAVLFFVAYNWAEMGRWLRFCLVQVAIVLAVGIAVWGKASPTVRRVALTAASLLVGVLLALVGQVYQTGADTWQLFFAWALLTLPWVWVARFELLWVLWLGVL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: UPI001F10F202 (DUF2157 domain-containing protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F10F202) HSP 1 Score: 251 bits (640), Expect = 5.400e-81 Identity = 126/158 (79.75%), Postives = 138/158 (87.34%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RR+LV LI QG IPPEQVARAV+ + LRPSPR W +FIDRLLLWLGGLAL FAVLFFIAYNWAEMGRWLRFGVVQ A+ LAIG+AVWGK + RVALT ASLLVGVLLALFGQVYQTGADPWQLFF WA+LT+PW W+ARF+LLWVMWLGLL
Sbjct: 1 MASTRRDLVLLIGQGVIPPEQVARAVQASGLRPSPRDWALFIDRLLLWLGGLALAFAVLFFIAYNWAEMGRWLRFGVVQTAMVLAIGIAVWGKRNLTLERVALTAASLLVGVLLALFGQVYQTGADPWQLFFTWALLTLPWVWVARFELLWVMWLGLL 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A1J8Q5D6_9GAMM (DUF2157 domain-containing protein n=1 Tax=Halomonas sp. QHL1 TaxID=1123773 RepID=A0A1J8Q5D6_9GAMM) HSP 1 Score: 249 bits (636), Expect = 2.250e-80 Identity = 120/158 (75.95%), Postives = 142/158 (89.87%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RRE+V+LIEQGAIPPEQVARA++V+ +RPSPRAW VFIDR+LLWLGGLAL FAVLFFI YNWAEM W RFGVVQAA LA+G+A+W K + +V+RVALT+A+LLVGVLLALFGQVYQTGADPWQLFF WAV+T+PW W+ARF+LLWV+WLGL+
Sbjct: 1 MASTRREVVALIEQGAIPPEQVARAIQVSGVRPSPRAWAVFIDRMLLWLGGLALAFAVLFFITYNWAEMSHWARFGVVQAATVLAVGIAIWPKVSSIVQRVALTSATLLVGVLLALFGQVYQTGADPWQLFFSWAVMTLPWVWVARFELLWVLWLGLI 158
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Match: A0A2A3XI01_9GAMM (DUF2157 domain-containing protein n=1 Tax=Halomonas sp. JB37 TaxID=2024405 RepID=A0A2A3XI01_9GAMM) HSP 1 Score: 246 bits (629), Expect = 2.670e-79 Identity = 121/158 (76.58%), Postives = 138/158 (87.34%), Query Frame = 1
Query: 1 MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGGLALGFAVLFFIAYNWAEMGRWLRFGVVQAALGLAIGVAVWGKPAPMVRRVALTTASLLVGVLLALFGQVYQTGADPWQLFFIWAVLTVPWAWMARFDLLWVMWLGLL 474
M + RRELVSLIEQ IPPEQV A++ A LRPSPR W +F+DRLLLWLGGLAL FAVLFFIAYNW EM RWLRFGVVQAA+ LA+G+AVW K ++RVALT+A+LLVGVLLALFGQVYQTGADPWQLFFIWA+LT+PW W+ARF+LLWV+WLGLL
Sbjct: 1 MASSRRELVSLIEQSVIPPEQVTHAIEAAGLRPSPRDWAIFVDRLLLWLGGLALAFAVLFFIAYNWLEMERWLRFGVVQAAVLLAVGIAVWAKTRLTLQRVALTSATLLVGVLLALFGQVYQTGADPWQLFFIWALLTLPWVWVARFELLWVLWLGLL 158 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14769.2782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14769.2782.1 >prot_E-siliculosus-1a_F_contig14769.2782.1 ID=prot_E-siliculosus-1a_F_contig14769.2782.1|Name=mRNA_E-siliculosus-1a_F_contig14769.2782.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=158bp MDTPRRELVSLIEQGAIPPEQVARAVKVARLRPSPRAWVVFIDRLLLWLGback to top mRNA from alignment at E-siliculosus-1a_F_contig14769:583..1056+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14769.2782.1 ID=mRNA_E-siliculosus-1a_F_contig14769.2782.1|Name=mRNA_E-siliculosus-1a_F_contig14769.2782.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=474bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14769:583..1056+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14769:583..1056+ >mRNA_E-siliculosus-1a_F_contig14769.2782.1 ID=mRNA_E-siliculosus-1a_F_contig14769.2782.1|Name=mRNA_E-siliculosus-1a_F_contig14769.2782.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=948bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14769:583..1056+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |