Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 405 |
| Model size | 405 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927537.472347-CDS-E-siliculosus-1a_F_contig1034:2689..3094 | 1622927537.472347-CDS-E-siliculosus-1a_F_contig1034:2689..3094 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1034 2690..3094 + |
| 1696318574.0714283-CDS-E-siliculosus-1a_F_contig1034:2689..3094 | 1696318574.0714283-CDS-E-siliculosus-1a_F_contig1034:2689..3094 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1034 2690..3094 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1034.272.1 >prot_E-siliculosus-1a_F_contig1034.272.1 ID=prot_E-siliculosus-1a_F_contig1034.272.1|Name=mRNA_E-siliculosus-1a_F_contig1034.272.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=135bp
MRYHFVDDVFIDLPSLCLGPAGASFSLQCATEYSVSLTLLAKSSTLTAGK
VNMHRSTCIGQHAHSNDPGSRIDDAFRIHRSTRFTFFTMPHSSPPSTRHI
YRQQRYNSVHSLLSVHHPEKTEQDANNNTPPYKTF back to topmRNA from alignment at E-siliculosus-1a_F_contig1034:2690..3094+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1034.272.1 ID=mRNA_E-siliculosus-1a_F_contig1034.272.1|Name=mRNA_E-siliculosus-1a_F_contig1034.272.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=405bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1034:2690..3094+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCGGTACCACTTCGTTGATGACGTGTTCATTGATCTTCCTTCTCTTTG
CCTGGGCCCCGCGGGCGCAAGCTTTTCTCTTCAATGTGCTACAGAGTACT
CCGTTAGTCTTACCCTGCTGGCGAAATCAAGTACTCTCACGGCAGGCAAA
GTCAACATGCATCGGTCAACATGCATCGGTCAACACGCGCATTCGAACGA
TCCTGGATCGCGCATCGACGACGCCTTTCGCATACATAGGAGCACAAGGT
TCACCTTCTTCACGATGCCTCACTCCTCGCCCCCCTCCACAAGACATATC
TACAGACAACAACGCTATAATAGTGTACATAGTCTTCTGAGCGTCCACCA
CCCCGAAAAAACAGAACAAGACGCAAACAACAACACCCCCCCCTACAAGA
CCTTC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1034:2690..3094+ >mRNA_E-siliculosus-1a_F_contig1034.272.1 ID=mRNA_E-siliculosus-1a_F_contig1034.272.1|Name=mRNA_E-siliculosus-1a_F_contig1034.272.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=810bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1034:2690..3094+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCGGTACCACTTCGTTGATGACGTGTTCATTGATCTTCCTTCTCTTTG
CCTGGGCCCCGCGGGCGCAAGCTTTTCTCTTCAATGTGCTACAGAGTACT
CCGTTAGTCTTACCCTGCTGGCGAAATCAAGTACTCTCACGGCAGGCAAA
GTCAACATGCATCGGTCAACATGCATCGGTCAACACGCGCATTCGAACGA
TCCTGGATCGCGCATCGACGACGCCTTTCGCATACATAGGAGCACAAGGT
TCACCTTCTTCACGATGCCTCACTCCTCGCCCCCCTCCACAAGACATATC
TACAGACAACAACGCTATAATAGTGTACATAGTCTTCTGAGCGTCCACCA
CCCCGAAAAAACAGAACAAGACGCAAACAACAACACCCCCCCCTACAAGA
CCTTCATGCGGTACCACTTCGTTGATGACGTGTTCATTGATCTTCCTTCT
CTTTGCCTGGGCCCCGCGGGCGCAAGCTTTTCTCTTCAATGTGCTACAGA
GTACTCCGTTAGTCTTACCCTGCTGGCGAAATCAAGTACTCTCACGGCAG
GCAAAGTCAACATGCATCGGTCAACATGCATCGGTCAACACGCGCATTCG
AACGATCCTGGATCGCGCATCGACGACGCCTTTCGCATACATAGGAGCAC
AAGGTTCACCTTCTTCACGATGCCTCACTCCTCGCCCCCCTCCACAAGAC
ATATCTACAGACAACAACGCTATAATAGTGTACATAGTCTTCTGAGCGTC
CACCACCCCGAAAAAACAGAACAAGACGCAAACAACAACACCCCCCCCTA
CAAGACCTTC back to top
|