prot_E-siliculosus-1a_F_contig10335.271.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10335.271.1
Unique Nameprot_E-siliculosus-1a_F_contig10335.271.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length118
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10335.271.1 vs. uniprot
Match: A0A6H5KWR5_9PHAE (Myotubularin phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR5_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 5.320e-5
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:   30 MVIPTASKSVPVSTGGRANSSSAGEACRAGPFSAEDG 66
            MVI T+SKSV VSTGGRA+S SAG A R GPFSAEDG
Sbjct:    1 MVISTSSKSVTVSTGGRADSKSAGGARRPGPFSAEDG 37
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10335.271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWR5_9PHAE5.320e-578.38Myotubularin phosphatase domain-containing protein... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10335contigE-siliculosus-1a_F_contig10335:1074..1427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10335.271.1mRNA_E-siliculosus-1a_F_contig10335.271.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10335 1074..1429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10335.271.1 ID=prot_E-siliculosus-1a_F_contig10335.271.1|Name=mRNA_E-siliculosus-1a_F_contig10335.271.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=118bp
AAAATAAAAGLDQWGIGGGLKGALSSASGMVIPTASKSVPVSTGGRANSS
SAGEACRAGPFSAEDGGSAAASSGPAVVPAAAATRDRLHGNNDDVGSSGP
PRLSAGGGAGPGSGGAAA
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