prot_E-siliculosus-1a_F_contig1453.2656.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1453.2656.1
Unique Nameprot_E-siliculosus-1a_F_contig1453.2656.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length215
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1453.2656.1 vs. uniprot
Match: D7FU51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU51_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 4.280e-82
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 0
Query:    1 MCLSRTGENLLKDILKNDSCAAAVKRVFEKSKSSILDKTRAVWTRWDELISGNTGKSSKQRKCRVGLVEDPPEERERHLEIYMRLAFINGTRTVMEAIDKIDPEFAEWGMERFVEAE--------DDIGGSDHLFGGTPEQVEDGTRGVTMTDGKWRVAGLVEKLEAAADRDLSKVCKFHDIEGHGVVRWCMVMALVGREMLSKHSGGRVNGMFGPLQTTG 213
            MCL+R G +LL +IL+ND C  A KR+FEK   SILDKTR   T WD +I+G+TG+SSKQRKCR+GLV+D PE+RER+LEIYMRL F++G R VMEAIDKID EF +WG+ER  EA+        DDI G DHLFGGT EQV  G  GV  +      +G + K    ADR+L   CK HDIEGHGVVRWCMVMALVGR ML KH+ G+V+ MFGPLQ  G
Sbjct:    1 MCLTRNGGHLLLEILENDPCEEAAKRMFEKISKSILDKTRNERTSWDAVINGSTGESSKQRKCRIGLVDDSPEDRERNLEIYMRLVFVDGIRPVMEAIDKIDSEFIDWGVERLAEAKGVSTSFDRDDIKGIDHLFGGTREQV--GEEGVVYSR-----SGCLFKQTDDADRELCNACKVHDIEGHGVVRWCMVMALVGRTMLKKHNKGKVSCMFGPLQANG 214          
BLAST of mRNA_E-siliculosus-1a_F_contig1453.2656.1 vs. uniprot
Match: D8LJ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ27_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.570e-17
Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 0
Query:    4 SRTGENLLKDILKNDSCAAAVKRVFEKSKSSILDKTRAVWTRWDELISGNTGKSSKQRKCRVGLVEDPPEERERHLEIYMRLAFINGTRTVMEAIDKIDPEFAEWGMERFVEAE--------DDIGGSDHLFGGTPEQVEDGTR 139
            +R    LL+ +L  DS   AV+R  +    S     R +        +G  G   K RK RV LVE+ PEERE  +++++     NG + VMEAIDK+DP F +WG++R  EA+        DDIGG +HL G T E V +G +
Sbjct:  303 ARFSPRLLEHVLGADSSHGAVQRTLDHC-HSFFQNARNLRKHVAAKTNGGVGDGIKLRKQRVPLVENTPEEREETMDMFVGAMSANGCQRVMEAIDKVDPGFVDWGLDRLTEAKNASTLFELDDIGGEEHLLGKTSEGVAEGEK 445          
BLAST of mRNA_E-siliculosus-1a_F_contig1453.2656.1 vs. uniprot
Match: A0A6H5J7T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7T3_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.980e-9
Identity = 49/151 (32.45%), Postives = 69/151 (45.70%), Query Frame = 0
Query:   54 TGKSSKQRKCRVGLVEDPPEERERHLEIYMRLAFINGTRTVMEAIDKIDPEFAEWGMER----------------FVEAEDDIGGSDHLFGGTPEQVEDGTRGVTMTDGKWRVAGLVEKLEAAAD---RDLSKVCKFHDIEGHGVVRWCMV 185
            T  S K+R+ RV +V+  PEERE+ ++  M     NG   +M+ + K DP F EWG E                 F+E  DD    D+L G  PE+++ G R         RVA L+ KLE   D   +D+S       + G     +CMV
Sbjct:  378 TRASVKERRLRVIVVDQTPEEREKSIDTCMAAIAKNGCGRLMDTVKKHDPGFVEWGKEHLAKAKINSTIWSSREEFIEKPDDGRSEDNLEGKAPEEIKHGQR---------RVANLMAKLEVGDDFTCKDISVFSVALKLPGCSQQPFCMV 519          
BLAST of mRNA_E-siliculosus-1a_F_contig1453.2656.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 9.840e-5
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 0
Query:  156 KLEAAADRDLSKVCKFHDIEGHGVVRWCMVMALVGREMLSKHSGGRVNGMFGPLQTTG 213
            K    A++ L  V K H+I G  VVRW MVM+LVGR  L + + G V+  FGPL + G
Sbjct:  324 KQHRTANKRLDTVLKEHEIHGADVVRWVMVMSLVGRAFLREDNNGVVDESFGPLNSNG 381          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1453.2656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FU51_ECTSI4.280e-8260.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ27_ECTSI3.570e-1738.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7T3_9PHAE9.980e-932.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3S0_ECTSI9.840e-546.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1453contigE-siliculosus-1a_F_contig1453:26435..27300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1453.2656.1mRNA_E-siliculosus-1a_F_contig1453.2656.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1453 26307..27300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1453.2656.1 ID=prot_E-siliculosus-1a_F_contig1453.2656.1|Name=mRNA_E-siliculosus-1a_F_contig1453.2656.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=215bp
MCLSRTGENLLKDILKNDSCAAAVKRVFEKSKSSILDKTRAVWTRWDELI
SGNTGKSSKQRKCRVGLVEDPPEERERHLEIYMRLAFINGTRTVMEAIDK
IDPEFAEWGMERFVEAEDDIGGSDHLFGGTPEQVEDGTRGVTMTDGKWRV
AGLVEKLEAAADRDLSKVCKFHDIEGHGVVRWCMVMALVGREMLSKHSGG
RVNGMFGPLQTTGD*
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