mRNA_E-siliculosus-1a_F_contig1032.264.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1032.264.1
Unique NamemRNA_E-siliculosus-1a_F_contig1032.264.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 1.530e-137
Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 1 
Query:    1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
            MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGK+GNLYPTDPIQAAFADSATDAVSDI GYMRGIIFEKDADKKAQLRK+LVETLLPTWLANLEKALKLAGG YFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESP VSSLVQRVMAEPRIVAYMEERPKK
Sbjct:    1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 5.520e-119
Identity = 178/207 (85.99%), Postives = 189/207 (91.30%), Query Frame = 1 
Query:    1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTF-EGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
            MAPMKLTYF+ AALGE LRLALAQSGVEWIDNRV  E+WPTLKPTLPYQQMPVLEVDGAVIPQ+ AILRYVGKMG+LYPTDPIQAAFADSATDAV+D+HG+MR I FEKDAD K QL K+LVE LLP WLANLEKALKLAGG YFAGDKLSIGDIAVVARLNWLTDGTF E VPS +L+E P +SSLVQRVMAEPRIVAYMEERPKK
Sbjct:    1 MAPMKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPKK 207
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 1.540e-91
Identity = 141/156 (90.38%), Postives = 146/156 (93.59%), Query Frame = 1 
Query:  151 MPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
            MPVLEVDGAVIPQS+AILRYVGKMGNLYP DPIQAAFADSA DAVSDIHGYMRGIIFEKDAD KAQLRK+LVETLLP WL N EKALKLAGG YFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLL+E P +SSLVQR+MAEPRIVAYME RPKK
Sbjct:    1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPKK 156
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 5.320e-76
Identity = 116/199 (58.29%), Postives = 151/199 (75.88%), Query Frame = 1 
Query:   16 LTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERP 612
            L+YF+  ALGEPLRLALA SG  W D RV  E++  +KP+LPY Q+P LEV G +IPQSLA +RY+GK+G LY  DPI+AAFAD+A +AV D+H ++R  + E+D  KK ++RK + +  LPTWL NLE+ALK AGG+YFAG KLSIGDI VVARLNWL  G  +G+P T++D+ P +S+LVQ VM+E +IV Y+E  P
Sbjct:    7 LSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 2.590e-67
Identity = 111/206 (53.88%), Postives = 147/206 (71.36%), Query Frame = 1 
Query:    1 MAP---MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEER 609
            MAP   + LTYF+FA   EP+R+ALA +G  W D RV   ++P LKP LP  Q+P+LEV G V+PQS A LRYVGK+  LYP D ++AA AD+A D+V D H  +   + +KD  ++ ++R+ LV   LPTWL NLEKAL  AGG YFAG KLSIGDIAVVARL WL +G+ +G+P++++DE P +S+L++RV AEP I  Y +ER
Sbjct:    1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQER 206
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.590e-50
Identity = 92/207 (44.44%), Postives = 133/207 (64.25%), Query Frame = 1 
Query:    1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDES-PFVSSLVQRVMAEPRIVAYMEERPK 615
            MAP + LTYF+     EP+R AL QSG EW D R+  E++  +KP+LP  Q+PVLEVDG  +PQS+ ILRYVGK+G L+P+D ++AA  D+  DA  D +  +R    EKD  K+ ++  +L    +P WLAN+EK L    G YFA +K+S+ DI +  RL  L DG + GVP+T+ D S P +++L   ++ EP+I A++ +  K
Sbjct:    1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFA-EKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 2.400e-47
Identity = 83/206 (40.29%), Postives = 131/206 (63.59%), Query Frame = 1 
Query:    1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPK 615
            MAP + L YF+ A   EP+R AL +  +EW D R+  E++  LKP+LP  Q+PVL +DG  + QS+AILRYVGK+G L P+D + AA  D+  D V+D+H  +R    EKD  KK ++R +L    +P WL+N+EK L    G +F  DK+++ DI +  RL+ + +G  +G+P+T+ D  P + ++   V++EP++ A++ +  K
Sbjct:    1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFF-DKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 2.660e-44
Identity = 82/206 (39.81%), Postives = 122/206 (59.22%), Query Frame = 1 
Query:    1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK 618
            M+ + LTYF+     E +RLA    G+ + D RV  +++  +K  LP+ Q+P+L VD  V PQS AILRY GK+G LYP+DPI AA  D+  D + DI   +R  I+E +A +K  +RKEL E  LP WL  LE+ L+ AG  +F G++++I D+ +  R+ WL  G   G+P T+L     V +  + V + P++  Y +  P K
Sbjct:    1 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGK 206
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: F2U7D3_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7D3_SALR5)

HSP 1 Score: 157 bits (398), Expect = 2.230e-41
Identity = 82/209 (39.23%), Postives = 121/209 (57.89%), Query Frame = 1 
Query:   13 KLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYMEERPKK*MTEIAQ 639
            +L YF+     EP RLA   +GVE+ D RV  +QW  LKP  PY Q+P+L+VDG +I QS AI+R+VGK  NLYP D ++AA  D     + DI+  +   I E+D ++K  +R+EL   LLP WLA L    K + G     D++SI D+     + WLT G  +G+P T++D+   + +L  R+  +P + AY ++   K   E A+
Sbjct:   31 RLVYFDIRGRAEPARLAFHLAGVEFADVRVSRDQWCKLKPKCPYGQLPILQVDGQIIAQSSAIIRFVGKKTNLYPEDHMEAARVDEVIGLIEDINWLIIPTIKERDMERKLAMRRELATDLLPRWLAVLN--CKFSNGYVLGPDRISIADLTAFTLIGWLTMGVMDGIPKTIVDKHANLKALQARIAKQPNLQAYFDKHYSKDPVEQAK 237
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BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Match: A0A534ZXF1_9DELT (Glutathione S-transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZXF1_9DELT)

HSP 1 Score: 147 bits (370), Expect = 7.330e-39
Identity = 85/203 (41.87%), Postives = 120/203 (59.11%), Query Frame = 1 
Query:    1 MAPMKLTYFEF-AALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHGYMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLV---QRVMAEPRIVAY 597
            M  +KLTYF+F    GEP RLAL+ +G+ + D+RVP   WP  KP+ P+  +PVLEVDGA++ QS  I RYVGK+ +LYP+DP QAA  D A +AV DI   +       +  KKAQ R+ L +  +  +L  L++ L+  GG YFAG +LS+ D+ V   +  L  G  + +P+ L D     + LV   +RV   P + AY
Sbjct:    1 MPKLKLTYFDFHGGRGEPARLALSIAGIPFEDDRVPGPDWPRRKPSTPFGSLPVLEVDGAIVTQSNGINRYVGKLADLYPSDPWQAALCDEAMEAVEDITSEVSATFSLPEDQKKAQ-RQALADGPITFFLTRLQQRLEAGGGQYFAGGRLSVADLKVFVWIRHLRSGKLDYIPADLPDR--VAAKLVAHFERVKNHPGMKAY 200
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1032.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHF0_ECTSI1.530e-13797.57Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D8LK37_ECTSI5.520e-11985.99Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JAZ7_9PHAE1.540e-9190.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B1N8E6_9PHAE5.320e-7658.29Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
B1N8E7_9PHAE2.590e-6753.88Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
B1N8E8_9PHAE2.590e-5044.44Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
A0A6H5KRV2_9PHAE2.400e-4740.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPV3_ECTSI2.660e-4439.81Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
F2U7D3_SALR52.230e-4139.23Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A534ZXF1_9DELT7.330e-3941.87Glutathione S-transferase n=1 Tax=Deltaproteobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1032contigE-siliculosus-1a_F_contig1032:2009..6032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size621
Model size1107
Exons6
Ec32 orthologEc-13_000340.1
Ec32 ortholog descriptionGlutathione S-transferase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOpisthokonta
COG Functional cat.O
EC2.5.1.18,5.3.99.2
EggNOG OGs3A52M@33154,KOG1695@1,KOG1695@2759
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko01100,ko05204,map00480,map00590,map00980,map00982,map01100,map05204
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409
KEGG koko:K04097
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
Seed eggNOG ortholog946362.XP_004994854.1
Seed ortholog evalue7.8e-37
Seed ortholog score160.6
Taxonomic scopeOpisthokonta
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927536.000413-CDS-E-siliculosus-1a_F_contig1032:2008..20411622927536.000413-CDS-E-siliculosus-1a_F_contig1032:2008..2041Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 2009..2041 +
1696318573.364885-CDS-E-siliculosus-1a_F_contig1032:2008..20411696318573.364885-CDS-E-siliculosus-1a_F_contig1032:2008..2041Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 2009..2041 +
1622927536.017589-CDS-E-siliculosus-1a_F_contig1032:2577..26771622927536.017589-CDS-E-siliculosus-1a_F_contig1032:2577..2677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 2578..2677 +
1696318573.3761053-CDS-E-siliculosus-1a_F_contig1032:2577..26771696318573.3761053-CDS-E-siliculosus-1a_F_contig1032:2577..2677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 2578..2677 +
1622927536.0309453-CDS-E-siliculosus-1a_F_contig1032:3607..38161622927536.0309453-CDS-E-siliculosus-1a_F_contig1032:3607..3816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 3608..3816 +
1696318573.3844745-CDS-E-siliculosus-1a_F_contig1032:3607..38161696318573.3844745-CDS-E-siliculosus-1a_F_contig1032:3607..3816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 3608..3816 +
1622927536.047169-CDS-E-siliculosus-1a_F_contig1032:4463..45041622927536.047169-CDS-E-siliculosus-1a_F_contig1032:4463..4504Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 4464..4504 +
1696318573.3931146-CDS-E-siliculosus-1a_F_contig1032:4463..45041696318573.3931146-CDS-E-siliculosus-1a_F_contig1032:4463..4504Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 4464..4504 +
1622927536.0652652-CDS-E-siliculosus-1a_F_contig1032:4882..49461622927536.0652652-CDS-E-siliculosus-1a_F_contig1032:4882..4946Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 4883..4946 +
1696318573.4022832-CDS-E-siliculosus-1a_F_contig1032:4882..49461696318573.4022832-CDS-E-siliculosus-1a_F_contig1032:4882..4946Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 4883..4946 +
1622927536.083453-CDS-E-siliculosus-1a_F_contig1032:5372..55461622927536.083453-CDS-E-siliculosus-1a_F_contig1032:5372..5546Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 5373..5546 +
1696318573.4110785-CDS-E-siliculosus-1a_F_contig1032:5372..55461696318573.4110785-CDS-E-siliculosus-1a_F_contig1032:5372..5546Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1032 5373..5546 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927536.1010265-UTR-E-siliculosus-1a_F_contig1032:5546..60321622927536.1010265-UTR-E-siliculosus-1a_F_contig1032:5546..6032Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1032 5547..6032 +
1696318573.4201715-UTR-E-siliculosus-1a_F_contig1032:5546..60321696318573.4201715-UTR-E-siliculosus-1a_F_contig1032:5546..6032Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1032 5547..6032 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1032.264.1prot_E-siliculosus-1a_F_contig1032.264.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1032 2009..5546 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1032.264.1

>prot_E-siliculosus-1a_F_contig1032.264.1 ID=prot_E-siliculosus-1a_F_contig1032.264.1|Name=mRNA_E-siliculosus-1a_F_contig1032.264.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp
MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQ
MPVLEVDGAVIPQSLAILRYVGKMGNLYPTDPIQAAFADSATDAVSDIHG
YMRGIIFEKDADKKAQLRKELVETLLPTWLANLEKALKLAGGNYFAGDKL
SIGDIAVVARLNWLTDGTFEGVPSTLLDESPFVSSLVQRVMAEPRIVAYM
EERPKK*
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mRNA from alignment at E-siliculosus-1a_F_contig1032:2009..6032+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1032.264.1 ID=mRNA_E-siliculosus-1a_F_contig1032.264.1|Name=mRNA_E-siliculosus-1a_F_contig1032.264.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4024bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1032:2009..6032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCACCGATGAAGTTGACATACTTCGAATTTGTGAGTGTACATGTAGC
GGTTGGGTACTATCATCCATCGAGCGATACATACATTGTAGTCGGCCCTG
AGCGAGCGTTGCGCGTGTGTCCGTTCATGTTCCACCATAGGTTGTGCGTG
TGGTTCTGCTTTGAAGGCCTCACGCGTCATCAGACTGCTCATCCAGCTCC
GACAACTTCCCTCGTACCCCGCCTCGGCGGTCGTCACGCTACAGAACTGC
CGGCCCCCTCATCACAAACATGCTCACAAATCGAGAGGCTGCGAGTTTTA
GTCTACACAGACACGCATAGGTGTCAGAATTTTAGAATTTTTTGCTGCCG
TAGCCTTCTGCACCACAGAGCTCGCACGCCACAGGAAGCAAATACCGTGC
GCTCAATCGTTGAGAGATGGTAAGGGCTGTGAGCCTCGTGGAAGTAGGTA
TTTCGTACGAGCGGGCCGGCGCTACTGAACTGGGAACAAAAGTTTGACGC
ACGTTTTGCAAGTGATGTATCCAACGCCCGTTCAAAAATCCGTTTGCCTG
TCCGCCGTTTGTCTCGCAGGCCGCCCTGGGTGAACCACTGAGACTAGCGC
TGGCACAAAGCGGGGTTGAATGGATCGACAACAGGGTGCCGAGTGAGCAG
TGGCCCACTCTCAAGCCGAGTAAGTCTGCTGAGTTAGTGCTGTTCTCTCG
GTAACAGCTGGAGGTTGTCTATTTTTTCGAAGAAGCAGAGCTGCTGGAGC
TCTGTCCTTGATTTCGGCTCCCGGGACGATGTTTTGCTATCGATCCGGGG
ATCCGCCGAGATCCGTCCTCGTAACGGCCTGTCTCTCAAATATTGTTATT
TGCAGCTCCAGTCTCCTCTCTTGCGGCCTGGAGTACCAGCCAATCTAACA
GGCAGCACATGACGGTGTTGAGAGGCAGCTTTTCATGGAGCCAGATCTCA
ACGGATGTTGTCTGGACCGCGGAAGCGCCAGGCTACCTACAACAGTTCTT
ACCTACAATACAGCAGCAGCGTGTTTTTTTTTTTTTTCTTCAAATCAGCC
CTCTCAGCACTAGACTACTTGCTGTAGAGCCGTGTCGCCAACCGGTTGTA
ACACATGAAGGGTTTCCCCTACCCACCCCTCCTGCGGTAATCTGCCTTCT
ATTTTTAATGCGAGAATAGTGCGGCACTCTCTTCCCTCTGTGTACACGCG
AACTAAAAGTACTGATGTAGTGCATGTAGCGCTCCACTCACCACAGGCAG
CCAGGAACGGAAGCGAGGGAAAAACTCACTTTGTAAATATCTCGCTTACG
CCAGGATTCGAACCCCTGGCACTTCCCGCTACAACTGTAGAAGGTTTTCG
AGGATACCACCTAGACTACCATGGCGAGCAGTACGCATGTTTTTTCCAGA
CTGGATGATTTCGCGGTCTTCACAAAAAAGAGTTGTCGGATTCTATCCTT
TTCTTGCCAAACAAACGTGCAACGCTGAGAACAAATAGTGTACAGTATAG
TGGCCATGCTGTTTCTCGCAAATGAAGTGACTTTCTCACACTTCGTCTAA
AACTACACGTGCCTCGCCTGCCGCGCGCTATTTTTTCCACCGTGCTCAGC
TCTGCCGTATCAACAGATGCCCGTGTTGGAGGTAGATGGAGCGGTCATCC
CTCAGAGTTTGGCAATTCTCCGCTACGTCGGGAAGATGGGGAACTTGTAC
CCCACCGACCCCATCCAAGCCGCTTTCGCCGACAGTGCAACCGACGCTGT
CAGCGACATCCATGGCTACATGAGGGGCATCATTTTCGAGAAGGACGCGG
ACAAGAAGGTACGGCAGGCAGTATAGTGGAACATGTTTCCATGTACCCCC
CCCCCCCCCCCCCTCAAGTTGCCGTCGCTCGCAAGCGTTACTTGCTACCC
GTCCGTATGATCTGTTCCGGGTATGAACAACAAGCCCCCAACCCTCGACC
TGCTTGCTTCTTCACGACCCTCGAAGCCAAGTTCATTAATTGACGAGGGA
CCAGCAACTCGTGTCACTCGAGGAATGAATGGATTGCGAAGTATGTAGAT
TCCGAACCTTGGAGATTCCAAAGTTGTTCATTCATGTATTCCGTTGGCGC
CCGCCGTTGCTGTCCTGATGGAGGATAGAGTATCTGCTGCCAAACACGTT
ACGAGGTATATGTAATGCTGCCCTTGTCATCGGTGACAATGCGGTTGCTA
TATGCCATCGTGCGTTCTCGGTGGACACGCGACTTGATCCGTTTGGCACA
GGCTTGAACGCCGTCGAAGCAGTACGCATTCGATTTGCCATGTATCCGAA
ACTAACCTCCGGTCGACCCGTTCAGCCATCCATGTTGTTCCTCAGCGAGG
TTTGATGCCGTGACGTTCTAAAAAACGTAGTGATACTTTCGTCTCTCTCT
CTGTCTCTCCCCTCCTTTGTCTTTGCTCGCGCCGACGTCTCCTCCCTGAT
CGCAGGCGCAACTGCGCAAAGAGCTGGTCGAGACCCTTCTCCCAACGTGA
GTGCCGCCTCAACGTTGGCCTTTGTCCCCCCCCGCCTTCATCTGGTGTAA
TCAAACTCGTGCTGGAGGAATCTGTCTGCATTATTTTCGATCTGGATGCT
CAACAAACGTGTTCGGCAACATGAATACCATATGCGATAGCGAAACATTA
AACCGTGGCGAGATGGGAAGTCGCAAATACTTGCCTCACCACCGTGCTTC
CGAACGAGGTGTTCACACATTTAGAGCGAGAGGACGGTGGTGTGGAACCA
GCGGGTGACCATTCGCTTGATGCACAGCTTGACACGAGGCAACGTTGTTC
TCACACTCACACACACACACACGTCCCCTCCTCGTCGACCCTCCACCCAC
ACTTGCACTTAACGTATTTCGCAGGTGGCTGGCCAATTTGGAGAAAGCGT
TGAAGCTTGCTGGCGGCAACTACTTCGCCGGCGACAAGGTATGAAGATGA
CGAACATTGTAGCACACTCTTCCAGTGTTGCTACGGTTTCTTTCGCCACG
CGTACCACCCCTCACCCGCTCTTTCGCTCGTGCATCACATTGCCCGCATC
AGCTCAATCGATGGGTACATAAGGAAGCATCTCGTGTCCGATACTGGTGT
GGTGTGGCACAAGAGTAACATAGTAGACAACTTGCTCATGTCATTCGAAA
TATTTCGGTAGCCGACAAGCACGTCCGTACTTGCCATTTTCACTCTATCT
ACTCGCCGAACTCCTTCCCACCCTGGAAGCATTTATTTTCTTCCCTCTCG
GGCCCCGTTATCCGGAGGCGGTAGCCCGGTTGCGCTTCGGCCTTTGTGAC
TCGATTCATTTCTTACGTGCGTTCCGTGGTCTTCACGACGTTGCTTCTTG
CTTCCTTTTCGCAGCTCTCCATCGGCGACATCGCGGTTGTCGCACGGCTG
AACTGGCTCACGGACGGTACCTTCGAGGGCGTCCCCTCGACCCTCTTGGA
CGAGTCCCCCTTCGTGTCCTCGCTCGTGCAGAGGGTCATGGCCGAGCCGA
GGATCGTGGCGTACATGGAGGAGCGACCCAAGAAGTAGATGACAGAGATT
GCTCAGTAGTATTAATAGTTGCCTTGCCGCGTGTTGAGCTACTACTGTAC
TGTACGGTAGGTACGCAGAAATTACACTGTCGGTGGGCGGAAGGAAGTTG
TTGTAGACAACGGGCAGGAAGCTTCCAACGGTGTAGTAAGTGGGTGGTCG
ACGTGGTAATTCTTTTTGGGTTTCTTTTGTGTTGGTGTGCGTCCTTCGTG
CGTGCTTCTTGTGCTATTTTCTGCCACCCATGAATGGACCGATGATCATC
GGCGTCTGGCGCAGACTTTCGTCTCGTGTGAACAGGCCAAGATTGAGTAT
CAGCGAGTAGGTGGCGTGGAAAAGGCTTGGACGGTGGAATAAAATTGGTT
GAGTGTTCATTTATTTCCCTTTCTCTTGAATTCTTTCAGTGAGGGACGCA
CACAGTTTGCGTCGGTCAGGGACTTGAACAAGGCGGTGTCTTGCTCTCTG
TTGAACTCTTGGCGAGTGAGGAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1032:2009..6032+

>mRNA_E-siliculosus-1a_F_contig1032.264.1 ID=mRNA_E-siliculosus-1a_F_contig1032.264.1|Name=mRNA_E-siliculosus-1a_F_contig1032.264.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1032:2009..6032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCACCGATGAAGTTGACATACTTCGAATTTATGGCACCGATGAAGTT
GACATACTTCGAATTTGCCGCCCTGGGTGAACCACTGAGACTAGCGCTGG
CACAAAGCGGGGTTGAATGGATCGACAACAGGGTGCCGAGTGAGCAGTGG
CCCACTCTCAAGCCGAGCCGCCCTGGGTGAACCACTGAGACTAGCGCTGG
CACAAAGCGGGGTTGAATGGATCGACAACAGGGTGCCGAGTGAGCAGTGG
CCCACTCTCAAGCCGACTCTGCCGTATCAACAGATGCCCGTGTTGGAGGT
AGATGGAGCGGTCATCCCTCAGAGTTTGGCAATTCTCCGCTACGTCGGGA
AGATGGGGAACTTGTACCCCACCGACCCCATCCAAGCCGCTTTCGCCGAC
AGTGCAACCGACGCTGTCAGCGACATCCATGGCTACATGAGGGGCATCAT
TTTCGAGAAGGACGCGGACAAGAAGCTCTGCCGTATCAACAGATGCCCGT
GTTGGAGGTAGATGGAGCGGTCATCCCTCAGAGTTTGGCAATTCTCCGCT
ACGTCGGGAAGATGGGGAACTTGTACCCCACCGACCCCATCCAAGCCGCT
TTCGCCGACAGTGCAACCGACGCTGTCAGCGACATCCATGGCTACATGAG
GGGCATCATTTTCGAGAAGGACGCGGACAAGAAGGCGCAACTGCGCAAAG
AGCTGGTCGAGACCCTTCTCCCAACGCGCAACTGCGCAAAGAGCTGGTCG
AGACCCTTCTCCCAACGTGGCTGGCCAATTTGGAGAAAGCGTTGAAGCTT
GCTGGCGGCAACTACTTCGCCGGCGACAAGGTGGCTGGCCAATTTGGAGA
AAGCGTTGAAGCTTGCTGGCGGCAACTACTTCGCCGGCGACAAGCTCTCC
ATCGGCGACATCGCGGTTGTCGCACGGCTGAACTGGCTCACGGACGGTAC
CTTCGAGGGCGTCCCCTCGACCCTCTTGGACGAGTCCCCCTTCGTGTCCT
CGCTCGTGCAGAGGGTCATGGCCGAGCCGAGGATCGTGGCGTACATGGAG
GAGCGACCCAAGAAGTAGCTCTCCATCGGCGACATCGCGGTTGTCGCACG
GCTGAACTGGCTCACGGACGGTACCTTCGAGGGCGTCCCCTCGACCCTCT
TGGACGAGTCCCCCTTCGTGTCCTCGCTCGTGCAGAGGGTCATGGCCGAG
CCGAGGATCGTGGCGTACATGGAGGAGCGACCCAAGAAGTAG
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