Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A6H5JLR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR5_9PHAE)
HSP 1 Score: 640 bits (1650), Expect = 3.820e-214
Identity = 482/573 (84.12%), Postives = 485/573 (84.64%), Query Frame = 1
Query: 214 GTISNHARATPTAGAAGARSVASAKPGAQQTSLAAASTAGAAAGGVAKLSCEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXXXXXXXXGASAQRAAPGQNGAAVSSAGAAGTVAGDGGGGAVVDGESASNAGAEGGKRPREEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXEAREKARAEAGDTAADEKLTKAEKSAKNKXXXXXXXXXXXXSKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGGAXXXXXAPETVSAXXXXXXXXXXXXXXXXXDTGKQTGGLSASAPSAAPACDTVVSESAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAGAVEDTGSDTGGLSTDESGSPAPAAEEGEPAVDAPXXXXXXXXXXXXXXXXXXXXX-TAAPSAIAKEAALSVPTDG 1929
GTISNHARATPTAGAAGARSVAS KPGAQQ SLAAASTAGAA GG AKLSCEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQ SGSGFQMIDVEG KFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXXXXXXXX ASAQRAAPG N AA+SS GAA TVA D GGGAVVDGESASNAGAEGGKRPREEDGA GNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXEAREKARAEAGD AADEKLTK E+S NKXXXXXXXXXXXXSKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGG XXXXX PET SA DTGKQ GGLS SAPS APACDTVVSES XXXXXXXXXXXXXXXXXXXXXXXXXXXVGAGAVEDTG +TGGLSTD SG PAPAAEEGEPAVDAP XXXXXXXXX TAAPS IAKEAALS PTDG
Sbjct: 9 GTISNHARATPTAGAAGARSVASGKPGAQQPSLAAASTAGAAVGGAAKLSCEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQLSGSGFQMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXXXXXXXXXASAQRAAPGPNSAAISSVGAADTVASDDGGGAVVDGESASNAGAEGGKRPREEDGAGSSLKVARVDDEGAVGQGEGTTKVAGAGGGNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXEAREKARAEAGDNAADEKLTKTERSTSNKXXXXXXXXXXXXSKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGGXXXXXXXPETASAPPSPSSDPAGDPASAGDDTGKQAGGLSTSAPSTAPACDTVVSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAGAVEDTGRETGGLSTDASGFPAPAAEEGEPAVDAPAXXXXXXXXXVPSSRSPPSPTHTAAPSTIAKEAALSTPTDG 581
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
D7FK97_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK97_ECTSI)
HSP 1 Score: 590 bits (1520), Expect = 1.630e-194
Identity = 485/580 (83.62%), Postives = 485/580 (83.62%), Query Frame = 1
Query: 199 QFKTAGTISNHARATPTAGAAGARSVASAKPGAQQTSLAAASTAGAAAGGVAKLSCEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXXXXXXXXGASAQRAAPGQNGAAVSSAGAAGTVAGDGGGGAVVDGESASNAGAEGGKRPREEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXEAREKARAEAGDTAADEKLTKAEKSAKNKXXXXXXXXXXXXSKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGGAXXXXXAPETVSAXXXXXXXXXXXXXXXXXDTGKQTGGLSASAPSAAPACDTVVSESAXXXXXXXXXXXXXXXXXXXXXXXXXXX-VGAGAVEDTGSDTGGLSTDESGSPAPAAEEGEPAVDAPXXXXXXXXXXXXXXXXXXXXXT-AAPSAIAKEAALSVPTDGS 1932
QFKTAGTISNHA ATPT GAAGARSVAS KPGAQQTSLAAASTAGAAAGG AKLSCEPCEKEFTTE ARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEG KFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXX XXXXXXGASAQRAAPGQNGAAVSS VVDGESASNAGAEGGKRPREEDGA GNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXX AREKARAEAGDTAADEKLTKAEKSAKNK XXXXXXX SKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGG XXXXX PET XXXXXXXXXXX DTGKQTG LS S PSA PACDTVVSESAXXXXXXXXXXXXXXXXXXXXXXXXXX VGA E TG D GLSTD SG EE EPAVD XXXXXXXXXXXXXXXXXXXXX AAP AIAKEAALS PTDGS
Sbjct: 21 QFKTAGTISNHAGATPTVGAAGARSVASDKPGAQQTSLAAASTAGAAAGGAAKLSCEPCEKEFTTEAARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXGXXXXXXGASAQRAAPGQNGAAVSSXXXXXXXXXXXXXXXVVDGESASNAGAEGGKRPREEDGAGSSLKVARVGDESAVVQGEGTRKVAGAGGGNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXXAREKARAEAGDTAADEKLTKAEKSAKNKKXXXXXXXVSAASKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGGXXXXXXXPETXXXXXXXXXXXXXXPASAGDDTGKQTGDLSTSGPSATPACDTVVSESAXXXXXXXXXXXXXXXXXXXXXXXXXXSAVGAXXXEGTGRD--GLSTDASGXXXXTEEEREPAVDXXXXXXXXXXXXXXXXXXXXXXXXXAAPPAIAKEAALSAPTDGS 598
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A7S2RYE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYE8_9STRA)
HSP 1 Score: 142 bits (359), Expect = 7.150e-33
Identity = 130/368 (35.33%), Postives = 171/368 (46.47%), Query Frame = 1
Query: 358 LSCEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVE-GN---KFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPDPXXXXXXXXXXXXXXXXXXXXXXXXXXGASAQRAA----PGQNGAAVSSAGAAGTVAGDGGGGAVVDGESASNAGAEGGKRPREEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKRLCTFYL-KGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXEA-REKARAEAGDTAADEKLTKAEKSAKNKXXXXXXXXXXXXSKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAA 1431
L CE C+KEF++ +AR AHL+SH PCP GC F+A +K+VN H E HGQFSG+G++ I+VE GN KFRVL+GTSP+EVA+WRAERRK WP+ N ARK ++ +RR+ G L P A+ A ++ AV S VD S G + P+ + C F+L G+C G+ C F HD XXXXXXXXXXXXX +A R + A G T+ TKA S+ + + TLLRKLL ++ RE S+ LQA+ FIV+ +F DA A
Sbjct: 58 LYCEACDKEFSSASARDAHLRSHTPCPHPGCSFAASQKVVNAHFEVAHGQFSGTGYREIEVEVGNRMQKFRVLMGTSPEEVAQWRAERRKNWPSKTNLARKSAEQHERRSRGSLDPKATARGGARKRPAPPDARTTGEPPSKKSAATLAELAMTYGDDEDDTAVGST--------------AVDAVSVETPGDMSSEPPKRRG----------------------------------KPCEFWLHNGKCRNGDKCGFVHDPSPPVCKYFLRXXXXXXXXXXXXXNSQAVRAEREARRGSTS-----TKASPSSNS-------VGGLRAQRTTLLRKLLENEMRRERSLVLQAIHFIVECDYFASDAQA 365
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A2D4C9T5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9T5_PYTIN)
HSP 1 Score: 122 bits (307), Expect = 3.180e-27
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDE 660
CEPC+K F E+ AHL++HV CP C FSA +++V HH+ HGQF+GSG + I+VEG +F VL+G SP+++ +WRAERRKRWP+ AR+EED+
Sbjct: 5 CEPCDKTFPIESQHAAHLKTHVSCPAPDCSFSASKRVVTVHHQTSHGQFAGSGLKEIEVEGQRFMVLVGNSPEDIEKWRAERRKRWPST---AREEEDD 100
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
W4FQN8_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQN8_9STRA)
HSP 1 Score: 120 bits (301), Expect = 1.780e-25
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDL 687
CEPCEK F ++ AH+ +H C GC FSA +++V +HH+ HGQ++GSG + I+VEG KF VL+G SP+++ +WR ERRK+WP+D N RK + + R GD+
Sbjct: 232 CEPCEKHFAMKSQFDAHVLTHEACWAPGCDFSASKRVVTSHHQTAHGQYAGSGLKEIEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDRVQAGDV 339
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
W4FR42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR42_9STRA)
HSP 1 Score: 120 bits (301), Expect = 1.400e-24
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDL 687
CEPCEK F ++ AH+ +H C GC FSA +++V +HH+ HGQ++GSG + I+VEG KF VL+G SP+++ +WR ERRK+WP+D N RK + + R GD+
Sbjct: 232 CEPCEKHFAMKSQFDAHVLTHEACWAPGCDFSASKRVVTSHHQTAHGQYAGSGLKEIEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDRVQAGDV 339
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A1V9Z0Q3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0Q3_9STRA)
HSP 1 Score: 119 bits (298), Expect = 1.450e-24
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDL 687
CEPC+K F ++ +AH+ +H C E GC F A +++V HH HGQF+GSG + I+VEG KF VL+G SP+E+A+WR ERRK+WP+ RK E ++R GD+
Sbjct: 203 CEPCDKHFALKSQHEAHMNTHESCWEPGCDFRACKRVVTAHHATVHGQFAGSGLKEIEVEGQKFTVLVGNSPEEIAKWREERRKKWPSTAVVKRKLEQTEERMLAGDI 310
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A067BQB0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQB0_SAPPC)
HSP 1 Score: 120 bits (302), Expect = 1.650e-24
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDL 687
CEPCEK F + +AH+ +H C C FSA +++V H++ HGQF+GSG + I+VEG KF VL+G SP+E+A+WR ERRK+WP+D RK ED ++R GD+
Sbjct: 326 CEPCEKHFALASQHEAHMNTHESCWAPDCDFSACKRVVTAHYQTSHGQFAGSGLKEIEVEGQKFNVLVGNSPEEIAKWREERRKKWPSDAVVKRKLEDNEERVQAGDV 433
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A024T851_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T851_9STRA)
HSP 1 Score: 119 bits (299), Expect = 2.570e-24
Identity = 51/108 (47.22%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDL 687
CEPCEK F ++ AH+ +H C GC FSA +++V +H++ HGQ++GSG + I+VEG KF+VL+G SP+E+ +WR ERRK+WP++ N RK E +R GD+
Sbjct: 234 CEPCEKHFAMKSQYDAHMLTHEQCWAPGCDFSASKRVVTSHYQVMHGQYAGSGLKEIEVEGQKFQVLVGNSPEEITKWREERRKKWPSESNVKRKNEQMGERVQAGDI 341
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Match:
A0A1W0ABE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE8_9STRA)
HSP 1 Score: 120 bits (302), Expect = 6.070e-24
Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 364 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGNKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDL 687
CEPC+K F ++ AHL +H C E C FSA +++V +HH+ HGQF+GSG + IDVEG KF VL+G SP+++A+WR ERRK+WP+ RK E+ ++R GD+
Sbjct: 669 CEPCDKHFPYKSQYDAHLNTHESCWEPNCDFSACKRVVTSHHQTVHGQFAGSGLKEIDVEGQKFTVLVGNSPEDIAKWREERRKKWPSTSVVKRKMEENEERIRAGDV 776
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1031.261.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.82e-214 / Id = 84.12 Expect = 1.63e-194 / Id = 83.62 Expect = 7.15e-33 / Id = 35.33 Expect = 3.18e-27 / Id = 53.54 Expect = 1.78e-25 / Id = 47.22 Expect = 1.40e-24 / Id = 47.22 Expect = 1.45e-24 / Id = 48.15 Expect = 1.65e-24 / Id = 49.07 Expect = 2.57e-24 / Id = 47.22 Expect = 6.07e-24 / Id = 49.07 Sequence A0A6H5JLR5_9PHAE D7FK97_ECTSI A0A7S2RYE8_9STRA A0A2D4C9T5_PYTIN W4FQN8_9STRA W4FR42_9STRA A0A1V9Z0Q3_9STRA A0A067BQB0_SAPPC A0A024T851_9STRA A0A1W0ABE8_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1935 Model size 3729 Exons 5 Ec32 ortholog Ec-17_003270.1 Ec32 ortholog description C2H2 and C3H1 zinc finger protein Hectar predicted targeting category other localisation BRITE ko00000,ko00001 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. L EggNOG OGs COG5084@1,KOG1040@2759 EggNOG free text desc. pre-mRNA cleavage required for polyadenylation GOs GO:0000122,GO:0000785,GO:0000976,GO:0000977,GO:0000981,GO:0001012,GO:0001067,GO:0001161,GO:0001162,GO:0001227,GO:0001776,GO:0002260,GO:0002376,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006359,GO:0006366,GO:0006383,GO:0006401,GO:0006725,GO:0006807,GO:0007162,GO:0008023,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010941,GO:0010942,GO:0015030,GO:0016070,GO:0016073,GO:0016604,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022407,GO:0022408,GO:0030155,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033081,GO:0033085,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035327,GO:0035363,GO:0042221,GO:0042592,GO:0042795,GO:0042796,GO:0042981,GO:0043029,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044212,GO:0044213,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045580,GO:0045581,GO:0045595,GO:0045596,GO:0045619,GO:0045620,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045945,GO:0046483,GO:0046677,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048872,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050896,GO:0051093,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070228,GO:0070230,GO:0070232,GO:0070234,GO:0070243,GO:0070245,GO:0071025,GO:0071027,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098781,GO:0140110,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902105,GO:1902106,GO:1902679,GO:1902680,GO:1903037,GO:1903038,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903707,GO:1990837,GO:2000026,GO:2000106,GO:2000108,GO:2000112,GO:2000113,GO:2001141 KEGG Pathway ko04621,map04621 KEGG ko ko:K20915 Preferred name ZC3H4 Seed eggNOG ortholog 2880.D7FK97 Seed ortholog evalue 2.7e-168 Seed ortholog score 599.0 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927535.403852-UTR-E-siliculosus-1a_F_contig1031:874..2668 1622927535.403852-UTR-E-siliculosus-1a_F_contig1031:874..2668 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig1031 875..2668 - 1696318572.9986753-UTR-E-siliculosus-1a_F_contig1031:874..2668 1696318572.9986753-UTR-E-siliculosus-1a_F_contig1031:874..2668 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig1031 875..2668 -
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1031.261.1
>prot_E-siliculosus-1a_F_contig1031.261.1 ID=prot_E-siliculosus-1a_F_contig1031.261.1|Name=mRNA_E-siliculosus-1a_F_contig1031.261.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=645bp
MMGAAEAQHGFRAGISNNNSWRQQQQQQQQQQQGGRTNMVNRNNGGNFVQ back to top mRNA from alignment at E-siliculosus-1a_F_contig1031:875..7938-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1031.261.1 ID=mRNA_E-siliculosus-1a_F_contig1031.261.1|Name=mRNA_E-siliculosus-1a_F_contig1031.261.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7064bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1031:875..7938- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)ATGATGGGAGCAGCTGAGGCCCAGCACGGCTTCCGCGCAGGGATAAGCAA
CAACAACTCTTGGCGGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAAG
GAGGGAGGACGAACATGGTCAACCGCAACAACGGCGGTAACTTCGTTCAA
ACGCCGACCCGTGCAGCCGCGGCGGGGCAGCAACAGCAACAGCAGCAGCA
GTTTAAGACAGCGGGGACCATCTCAAATCACGCCCGCGCAACACCAACGG
CGGGAGCCGCAGGGGCGAGGAGCGTCGCCAGCGCCAAGCCAGGCGCGCAG
CAAACCTCTTTGGCGGCAGCCAGTACCGCGGGCGCAGCTGCGGGGGGGGT
GGCGAAGCTGTCTTGCGAACCGTGCGAGAAGGAGTTTACCACGGAGACAG
CCCGGCAGGCCCACCTGCAGTCCCACGTGCCGTGCCCGGAGAAGGGCTGC
GGCTTCTCGGCGCTTAGGAAGATCGTCAACAACCACCACGAGGCCAAGCA
CGGCCAGTTCAGCGGCTCCGGTTTTCAG GTGCTCTGCTCCCACAGCCTTG
TAGTAGTCCCTGCCCGCTCCCGAAGAACGTGTGGTTGTATTGCATGGATG
GTGTAGGGGGATCAAACACTGCCGTGTGTAGTTCCAAGACTTGCTCTTTA
GCCTCGTATCCGCCGTAGGGTGTGGTTTCTTGGAATCCAAGAATCCCTCC
TCGTGGCTGTCTATGTAGCTTATACCCGAGAATCGAGCCTCGAATGATTC
CGGCTGCTTCTGACTGAGAGGAACTGTAGGCGGGCCTACACGGTTTGGGA
ATAGAGTAGTAGGCGTCCCCCGCGTATTGCACCCCATCTCGGCTGGCTGG
TACATACGTTTATCTGTACAATATACCCTTTATTTCTCCACCAACATTCG
GATGCCTTACACTCGTAATTTGTCTTGCTCGAAGCAAACAAATCCCGATA
CTGTAGTGGCTTGATATAATGAGTTCCCGCCATCGTTCGAACCATCCGAC
TATCACGAGGAAACCCCGGTCTGCCCCTCGCTGCACCCCCGCCTTTGACA
CACGCGTGATGATCGATTACGTGTACCCTTTTTGCGGCTTTCTTCCAACA
AACCACACAGATGATTGACGTAGAGGGAAATAAGTTCCGAGTGCTGCTGG
GAACTAGCCCCGACGAGGTGGCCGAGTGGAGGGCGGAGAGGAGGAAACGG
TGGCCGACAGACGAGAACAAGGCCAG GTGCGTTCACCCCTGCCACCGACC
GCACTCCCCGCCCCACCCCGCAAAGCTACCGCGAATCTTGTGCGCGGTGG
AAAAGGTTGCTTGGGGAAAATTCTTCGTGGTGTTGTGCACCAGTGGTTTT
CAGACAAGGCACCCGATGTATCCGGGACTGCTTGCTTAGGGGATGATCGC
CAACCGCAACCGCGTTTTTTGGGGTAGCTGGCCTTGAGGACAAAGGTCGT
GGCCCCTTATCAAGTGAGTCTTGCCCCCTCCTCTTTGTGCTCCCCCGTGC
CGTGTCTCCTCTCTGGGGGAGCTTCTACACTCGGGTTTCCAACAGTTGAT
GGCTGCCGCCCACCTTGTCAAGTAACGGACGAGTGAGTTTGCCCGACCCA
ACCCAATCCCCACCCCGCTATCGAGGGTCTACTTATGGCCATGCGTGGTA
TACCACGACCCCCCCCCACAACCGAAACACGCCTCAAAACAGGAAAGAGG
AGGACGAAAAAAAGCGGAGAGCTCTCGGCGACTTGGGTCCGGACCCCGGT
CCGGCGGGAAGAGGCCGAGGGAGAGGGCGTGGTAGGGGCAGGGGGCGCGA
TAGAGGGGGCGGGGGTGGCAGGGGGGGCGCGTCGGCGCAAAGGGCAGCCC
CAGGCCAAAATGGCGCGGCCGTCTCATCCGCCGGCGCCGCCGGCACGGTA
GCCGGTGACGGTGGTGGCGGTGCCGTTGTGGATGGCGAGAGCGCAAGCAA
CGCCGGGGCGGAGGGTGGGAAACGCCCGCGTGAAGAGGACGGGGCGGGGA
GTTCGTTAAAGGTGGCCAGGGTTGGCGATGAGGGCGCGGTGGTGCAAGGG
GAAGGGGCGAGGAAGGTTGCGGGAGCAGGGGGTGGCAACAAGAGGTTGTG
CACGTTCTACCTCAAGGGTAGGTGCGACAAGGGCGAGGCGTGCACGTTCA
GCCACGACGTCGAGCGAAAGAACTGCAG GTGGGTTGTACGCCCTTGGTTG
TGTCTTCATGCCCCGTTTGGGACCGTAGTTCGTGTTTGTCGGTTGTCTGC
TCTTGCAGGCCTGTTTCGCGTGGTGTGGAGCAAGTGTTGTACCGACCTCG
TGCCGGACACACCCGTGCAAGCTAGCTGTCGCGTGTTGAGAACACGGCCT
GTCTGGTTCTCCTCTTGCAATGAGCAAGATAACGGTTTGATACGCCCCAA
ACATTCTCAGGAGCGATTTTCGATGAAGACGCACGGCCATGCCCAACATG
GCACACGAAAGACTCAGCTTTTGGCCGCTTTCGAATCCTACCTTATGCGT
GCGACCACGTTTCTGTCCCTCGCAGCCATTTCACGCACCGCCGTTGCCAC
AAGGCTCAGCTCCTGTCCATCCTGTGCAACGTGTGTAAGACGAAACCTGT
TTCTTCTCAAGACAGTTGGTGAACCGTCGTTACCGCAAAGACAAGTTCTG
ATGATCGCCTGCTCACCCTACCCGTCGAGCGCAACATACGCGCCCACACA
TGCGCGTGCCCACGCACCCCCTCTCGTTCGCAGCTACTTCATGAGCGGCC
GTTGCCACCGCGGGAAGGGCTGCTTGTTCATGCACGACCACGAGGCTAGG
GAGAAGGCGAGGGCGGAGGCCGGAGACACCGCCGCTGATGAGAAGCTCAC
CAAGGCGGAGAAAAGCGCCAA GTGAGAAGCAGCAGTTCTACGGTTACCAT
AGGTTCTGCCAGCACGCAATCAAATCCATCGGTGTCGTGGGTTTTTTGTC
GGCGTTGCATGTTCGCGTTCTCTGTGAGCTTTCCGAGCAAGGGGCACCGT
CGATTCTCGACCCCAACAAAGCCGAGCAATCTCACCAAGACATTTTTTGG
CAGATTTTTTGGCACAAGACGGGCTTTGTGTTCAACCAAATACGGAGCAG
GGGACACCGTGGCGAGAAAATCGCCGAGACCAAGAGGCACCGCAAATACG
AGCAGAGGAATACTATACTGATTGGCGATTTGGATATTGGAGATACATAA
ACTCCCGAAGGATGTGATTTAAGTCAAACCCAAAATTCATACTTGGATCG
AAGATGCGAATCTCCACCAGATGATAATTCAGGGATAATCTTTTCAACAA
TGACGAAGTGCATTTTGACGTAACCAATGTCATAGCTATGTCCAAACTGC
AACACGTCTGGGGGACTAGCGATGCTTCATGAAATAACGGTTGTCGACGC
TTGCTTGCTTCGCACTCCTTGAGACGAAAAACCACGATCGATCGCCACCC
CCAGAATAAAGTGAAGAGTCCAAGACCCTTGCAGTAGGAAAAGTCAAAGG
TCCTCTCTTTCTTATTCTCGTCTTGGTGTGAAACCATTAACAGTCGTCGC
CCTTTGGTTTCGAACCCTACGTTGCACCTTCGACCCCGGCACTCATGCTC
CCGACCCCTGTAACTGCGATGAATGAGACTGTTGTAGACCAGCACTTTTT
TCAGCACCGGCGTATTTCCGCCAGACAAGAAAACAGGAATAAAAACTGTT
GGGAAAGTCCCCTTCATGAATAGGCACGTGGTATTTTTTTCCAACAAAAT
GGAAATGAATGGACGGCGTTGCAGCTCGGCAGCCGTGTTGTCTTCCGTCT
CCGTTGCCCGCTGGCCGGTGCGGAGCGTGGCCGCCTTCACTACACCTCTC
TCCTCTTTCGAGCGCCAGAGTCAGTCGCGCATAAGTCGTACGCAATGCAC
GGTTGACTCTGGCACTCGGGAAAGAGGTGAGATGTAGCGAAGGCGGCCAC
GCTCCGCACCGGCCAGCGGGCAACGGAGACGGAAGACATCGTGTCTGCCG
AGCTGCAACGCTGTCTCGCGGCGCGGAAGGCGAGCTCAAGCAGGTCGGGC
AACAGCTCGCCGTAGCGACCTAGTGTAATCACGCCCAGAAGATCGTGAAG
AAATGAATCGACTCGCCACCAGCCGGTCGGGCTCCGGCTATCCCCAGAAG
CCTTCTTGCCTAGCAACCAAGAAGACTCAAACGGGTAGGCGTAATGTGGA
GATCCCCTTCGTAAGGGTACAATCTCCCCGGCGTTGGTCGAGGACGATTG
GTGCTCTCTTTTCCCGAAATCCGGTCCTTCAATCGCCTTGGCCGAGCGAC
TGTTAACCCTTATGCCGAACCAGGGCCCCTTTAGACCAAAACGATTGGTT
GTACGGCAGGACTACCGCCCAATGAAGCCGGTCAGAACCCCACGAAAAGT
CAACCTCTCAGCGGCCCCTTTCATGCCCTTCCAGGGCTATAGCCCAAAAA
ACGTTGTTAGCCGAAACAATACCCACCCTAAACCTCAACCCGTACGGTAG
TAGAAGCCAAACTCACAAGACAAATGCTTCACCGTGACCTACCTTTTTAT
TTGTTACTCCTCGTCGTTGTCCGATCCGGTGGACGGCATGAAAACACACA
CAGGAACAAGAAGGCGGCGGCGGCGGCGGCAGCGGTAGCGGCGGCGTCCA
AGCCCACCCTCCTGCGCAAGCTTCTCGCCCCTCAGCTGCACAGAGAGAGC
AGCATCGCCCTCCAGGCCGTGCGGTTCATCGTCCAGTCGAAATTCTTCCA
GGACGATGCCGCCGCTGCCGGTGGCGCCAGCGCCTCCGCAGCTGCGCCGG
AGACGGTTTCGGCACCACCTTCCCCCTCTGCTGCTCCAGCTGGTGATCCT
GCTAGTGCTGGTGACGATACTGGCAAGCAAACCGGCGGCCTGTCGGCTTC
GGCCCCGTCGGCTGCTCCGGCTTGTGATACTGTTGTTTCTGAGAGTGCCG
GTGCCGGCGATGATGCTGGCAAAGTGCTGTCGGCCTCGACACCACCGGCC
TCGTCTGCCGCTCAGGCTTTTGATTCTGCTGTTGGTGCTGGTGCCGTTGA
GGATACTGGCAGCGACACCGGCGGTCTGTCGACCGATGAATCGGGGTCCC
CCGCTCCTGCCGCGGAGGAGGGAGAACCCGCCGTCGACGCTCCAGCGGCG
GCGGCAGCGGCGGAGGTAGCAGTGCCATCATCAAGATCTCCTCCCTCCCC
GACTCCTACGGCAGCCCCCTCCGCCATCGCTAAGGAAGCCGCCTTGTCTG
TGCCCACCGATGGCTCGTAG AACGGACACACATACGCAGTATATCAAATG
CTCGTGGGCACCTGTTTTGCCCGCGGCGCAACGCAGTGGAGGAGTGTCGT
GGTGAGTGTTACGCCCCCCCCCGATAGCACCTGGTGGTTGCAGGGTAGGG
GTAGTTACCTCTTGTTTCCCCCTTCATTCGTGTTCAAAACAGAACTGAAT
GAGATCCCAAACATTGTTATGGAAAAGGCATGAAAACGCCCTGGTTAAGG
TTTGGGAAAAGTGTCGAGTCTCTGAGATGTATGCATGTGTGCGTGTTTTT
TTTATTTGCATTGACCGCCCTAACCGGCTCACCATTGAAACAATGCCAGG
CTCAGTGCAGCCTGTGTGTGCGTGTGGAGTGTGCGATTTTCCCAGAACCA
AGGGTACGTTTGTTGTTTGGCAATGTCGTAGGGTTAGCCCGGCGACAAAG
AAGCAAGGGCGGCTCGGGTTAGCACAAGGGCGAGAGAAATTTAATCGGTG
TCATGACTCCGTGGTGTGGTAAGCAGTGCAGGTGTGCTTTTGTTCAGAGA
GCGGAATAGTATGAGATGAGCGTATAGACACCCGAGAGCGATACCTTTGG
TTATCTCGACGAGCAGAAAAAGTAGAACAAGGCTTCAGTCTTTGCAAGGA
CAGAAGTAGCACATGAGCTGGGGAAAGGAGGGGCGGCCGGACGGGAATCA
ATATATCATGCTCGGGGTGGTATGCATACTGAAAATATGCCGTAGGTAGC
GGCGAGAAGGTTGGTCACCTTGATTCATAGTCCTTTTGTAGGTTTGCAGG
AATGAAAAAATATTCGCATCTGAGTCAGGTCGCTTTGATGGAAGCAGACA
ATCCCTTGAAGATTTGGCATGCGTTGAGTGCTGTGTTGTGCAAGGGGGGC
TTGAGGGACTCCGAGGTTGAGAGCTCATTCCAAGGGGAATCAGTTCCGAC
AAAGCCGGGCTGTGAAAGGGAACAAAGGTGGTTACGCGAGTTGCGGTATG
GTTTCCCCCGTGGTGGTTTGAGTTTGTTCCCGGCAACGTCCAGCAAGATG
AAAACGAGCACCTCCGGCTGTATCGAGAGGGTAGACACTTCGATCAACCG
CAGGCGCCACTTGTCCCATTCGATCTTGTAGTACTACCGCGAATGATTCG
CCATGTTCTTGTGCGTCAACGTAAACGTGGTGGCGAGTTTCTATTAAGTA
ATCATGTTGGATAAACTATGCAATCGGAGAAGTTGGGTAGGGGTTAGCGT
TAGGGAAATAGGGTCTGCGTCCCCCCTCCCTGTTCCGTCCTCTCGAGGAC
GCATGGTCAATAGTCTAACCGCTAAGGCACGCAAGACATAAAGTACGCCC
CCCCTCCCTGTTCTATATCCTCATAACCTTATTAATCCCGCGAAGGCGGT
CCTTTGTACGAGGATGTGTGTGAGCACCAAGCGCGTTTCTACTCGTAGGT
AAGTGTGTGGGGTTTGCCTCCCGTCGTGTCCCGCCTTTGCCGCTGCTGTC
GTTGCCTTCGTGCTGGGGTCCTCCGGCGTTGGGTGTTTGGTGTGTGTGGG
GGGTCTTGCTTGTTATGGGGGTAGTGCGAAAAATACTGTCTGGTATTAGA
TGCCGTTAGTCTAGAGATCGTGCGTGCGTGGTTTACGTTCCCGTGGTTGC
AGTTTTTGGTGTTCGTGTTGGGGTTACTTCGTCCTGCGCCGTTGTTTCCC
GTGCTGTGGTGTGGCCGGCGTAGCTCGCGAGGTTTTGGTAGAGTGTTGAG
GCGCCCGTAGTTCTCCCGAGAGGTCTTTGCGCTGCCTTGTGATTAAGAAC
ACATGGAAATCGGA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1031:875..7938-
>mRNA_E-siliculosus-1a_F_contig1031.261.1 ID=mRNA_E-siliculosus-1a_F_contig1031.261.1|Name=mRNA_E-siliculosus-1a_F_contig1031.261.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3870bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1031:875..7938- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top