prot_E-siliculosus-1a_F_contig10307.259.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10307.259.1
Unique Nameprot_E-siliculosus-1a_F_contig10307.259.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length53
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10307.259.1 vs. uniprot
Match: A0A6H5KG52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG52_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.490e-23
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 0 
Query:    4 RDILLSTKRTSSGGDVWVCVDRLCGMSRELVVVCPASNEADPLHISAEFE 53
            RDILLSTKRTSSGGDVWVCVDRLCGMSRELVVVCPASNE D LHISAEFE
Sbjct:  317 RDILLSTKRTSSGGDVWVCVDRLCGMSRELVVVCPASNETDSLHISAEFE 366
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BLAST of mRNA_E-siliculosus-1a_F_contig10307.259.1 vs. uniprot
Match: D8LM66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM66_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.610e-20
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 0 
Query:   11 KRTSSGGDVWVCVDRLCGMSRELVVVCPASNEADPLHISAEFE 53
            +RTSSGGDVWVCVDRLCGMSRELVVVCPA+NEADPLHISAEFE
Sbjct:  149 ERTSSGGDVWVCVDRLCGMSRELVVVCPATNEADPLHISAEFE 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10307.259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG52_9PHAE1.490e-2396.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM66_ECTSI4.610e-2095.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10307contigE-siliculosus-1a_F_contig10307:511..669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10307.259.1mRNA_E-siliculosus-1a_F_contig10307.259.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10307 511..669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10307.259.1 ID=prot_E-siliculosus-1a_F_contig10307.259.1|Name=mRNA_E-siliculosus-1a_F_contig10307.259.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=53bp
MCNRDILLSTKRTSSGGDVWVCVDRLCGMSRELVVVCPASNEADPLHISA
EFE
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