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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE) HSP 1 Score: 719 bits (1856), Expect = 4.340e-254 Identity = 422/493 (85.60%), Postives = 427/493 (86.61%), Query Frame = 2
Query: 50 MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGHKHGPRRGGKAASVLPFPSGNGGTRXXXXXXXXXXPQKSAVPPPWSAEGGRSSNGNNFSTGVGKGGYDAVGAMPRATETAXXXXXXXXXXXXXXTDSNGGFRAGPHTAPPFGSANGYVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 1528
MTMTDRT+EF AVSAFRPTVT VNNSGEAA IRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQR+ADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSS XXXXXXXXXXXX XXXXXXXXXXX KGHKHGPR+GGKAASVLPFPSGNGGTR PQKSAVP PWSAEGGR+ NGNN STGVGKGGYDAVGAMPRATE A XXXXXXX TDSNGGFRAGPHTAP FGSANGYVP RATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLG MFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR
Sbjct: 1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFPSGNGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXR-----TDSNGGFRAGPHTAPTFGSANGYVPPAAGGGSGRAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA) HSP 1 Score: 115 bits (287), Expect = 6.490e-26 Identity = 60/142 (42.25%), Postives = 97/142 (68.31%), Query Frame = 2
Query: 182 SEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRHADG--GTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 601
++F + +++A+ EGT++LI +L +LVGRKG SN+P EI+DV +LF+GDM +Q+++S+LQ DG G RG+P SQR H +++ L++ AQE AF+ AL R AV ++ N+R++ +S +R V + Q++ PLF
Sbjct: 34 TDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.160e-23 Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 2
Query: 1298 MIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 1513
MIG+LG MFS+FS +VAAQEE V+HIEDDVE AH FA +G AHL++YYQ SGNRGII+KV I+L +WVF
Sbjct: 1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.390e-15 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 2
Query: 1241 VQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 1528
++Q SK RV+E+ +E I + MFS+ +TMVA Q E+V I+DD+E A G L +YY I SGNRG+IIK+FI L+V I++F+ L +
Sbjct: 10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN) HSP 1 Score: 79.3 bits (194), Expect = 2.230e-14 Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 2
Query: 1247 VQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
+++ S+ R+D +H +EK IG LG++FSRFS++VA Q EVV ++DDVE A E G A L K ++ GNR + +KVF +LI I +F+
Sbjct: 2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLFV 91
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC) HSP 1 Score: 80.1 bits (196), Expect = 2.270e-14 Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 2
Query: 1250 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
Q D+ +R+ E+ VEK I +LGQ FSR + +VAAQ EVVM I+DD+EAA ++G A + Y +I GNR +I KVF +L+V I VF+
Sbjct: 25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVFV 113
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-11 Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 2
Query: 1265 TRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
+R + V+K IG+L QMFS+ + +V AQEE++ I+ D+++ +EGQ HL KY+Q S NRG+IIKVF++LI + F+
Sbjct: 216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFVVFFV 299
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.360e-11 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 2
Query: 1250 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
Q D+ +R+ E+ VEK I +LGQ FSR + +VAAQ EVV+ I+DD+EAA ++G + Y +I GNR +I KVF +L+V I VF+
Sbjct: 278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVFV 366
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 8.690e-11 Identity = 36/89 (40.45%), Postives = 64/89 (71.91%), Query Frame = 2
Query: 1259 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLM 1525
+++R++++ VE MIG++G M+SR + ++A QEE++ IEDD+ AH+ E G L KY+ S NR +I+K+F++L+V I++FL ++
Sbjct: 240 AQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFLVVL 328
BLAST of mRNA_E-siliculosus-1a_F_contig1030.256.1 vs. uniprot
Match: A0A6G0WSE7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.120e-10 Identity = 33/86 (38.37%), Postives = 60/86 (69.77%), Query Frame = 2
Query: 1259 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 1516
++ R++++ +E I ++G M+SR + ++A+QEE++ IEDD+ AHA E G L KY+ S NR +I+K+F++L++ I++FL
Sbjct: 224 AQARLNDAQHMEATISEIGGMYSRMTGLLASQEEMLGRIEDDMTTAHANVESGYEELMKYFSTVSSNRSLILKIFLILLLFIYLFL 309
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 1482 |
| Model size | 2125 |
| Exons | 7 |
| Ec32 ortholog | Ec-06_004720.1 |
| Ec32 ortholog description | Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko00001,ko04131 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | U |
| EggNOG OGs | KOG0812@1,KOG0812@2759 |
| EggNOG free text desc. | vesicle docking |
| GOs | GO:0000003,GO:0000139,GO:0000149,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0001505,GO:0002164,GO:0002376,GO:0002520,GO:0002790,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005886,GO:0006810,GO:0006836,GO:0006873,GO:0006875,GO:0006878,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006900,GO:0006901,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008104,GO:0008150,GO:0008283,GO:0008361,GO:0009306,GO:0009653,GO:0009791,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010604,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0017156,GO:0019222,GO:0019725,GO:0019953,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030097,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031201,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033206,GO:0034498,GO:0034613,GO:0035166,GO:0035167,GO:0042147,GO:0042175,GO:0042176,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045184,GO:0045732,GO:0045786,GO:0045930,GO:0046903,GO:0046907,GO:0046916,GO:0046983,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048278,GO:0048280,GO:0048284,GO:0048285,GO:0048308,GO:0048313,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051726,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0060305,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090114,GO:0090166,GO:0090174,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098771,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140013,GO:0140029,GO:0140056,GO:1903008,GO:1903046,GO:1903047,GO:1903358 |
| KEGG Pathway | ko04130,map04130 |
| KEGG ko | ko:K08490 |
| Preferred name | STX5 |
| Seed eggNOG ortholog | 2880.D8LR19 |
| Seed ortholog evalue | 6.1e-213 |
| Seed ortholog score | 746.9 |
| Taxonomic scope | Eukaryota |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1030.256.1 >prot_E-siliculosus-1a_F_contig1030.256.1 ID=prot_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=494bp
MTMTDRTEEFQRAVSAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQL
AASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQ
KDISSLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSAGGAGGGARRRRP
TANLASPPPPLPDEDDEDNKGHKHGPRRGGKAASVLPFPSGNGGTRGGGG
TGGSSWPQKSAVPPPWSAEGGRSSNGNNFSTGVGKGGYDAVGAMPRATET
AAAAAAAAAAAAAARTDSNGGFRAGPHTAPPFGSANGYVPPAAGGGSGSA
HAAAPPGFPPPPTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQV
QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAH
AFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR* back to topmRNA from alignment at E-siliculosus-1a_F_contig1030:13484..18803- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1030.256.1 ID=mRNA_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5320bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:13484..18803- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCAGTCCTAGGAGCGAGAGGGCGAGACTGCCAAGAGGAGGTAGAGAGACA
TGACCATGACGGACCGAACCGAGGAATTCCAACGCGCGGTCAGTGCCTTC
CGTCCCACAGTCACGGTGGTCAACAACAGCGGGGAGGCAGCGGCAATCAG
GGCGCAGACCGACCTCGGGTACAGAAAGACGTCGGAGTTTCTCCAGCTCG
CTGCAAGCGTTGCAGTCGGCTTCGAGGGCACGTCCAGGCTGGTGAGTGTC
TTCTTTCCTGCTAGAAGCTACAGGGCGTGGGTGGTAGGGACGTCTTGCTA
GTTGGCAGAGGAGCGCGAGTGTCACGTTTGCTATGGGAATGCGTCGTAGT
ACTACTGCTGTAGATGGGACATTGAGTTGCACATATGCTACACGCCGTCG
GTTGTTTGCGGAGACCTTGTGGGGGGAATTCGACGAAGAATATGCGCAAG
GCAACAACAATTGCAGGTCCAGTAGGCAACCCTTCTCTTGCACGGAAACA
TTTGGCACGCCTGCTGAATACTTTGCTGGAATTTCGGCGGCCTCATTGTT
GTGCTTGGGGATGCGCAGCAGTAATATTGAAACCCCTCAAGTGTCGTGTC
CAGCAGACAAATCGACCAATCATGAAGGCACACCACTCTTTATTCTCTAT
GTAAATGATGCTCTCACGAGGAACAAACAGGACAACACTGACTGGCGACC
AGAGCACGCGGCCTTTTGCGGCGGTCGTCCGTTTTTAGAAACGTTTTGTG
CATATCATGTCGTACAGGCCGGTGTAACACCAACGAGAGGGCTGACAAGT
GGTAGCGTCTGGTCGCCAAATGTGTATGATAGTGACGACAACAATGCCAT
CTGTTTTTTATACTAATATACTGCACTGCGTATTACCGCCTCTCGGGCAC
GAAGTATACGCTGCTGGGGTCGGTTGTAACGGCCACGTATTTCGACCGTG
TTGATGTGCGGTGTATTCTCACCAAATAGTGCAACGCACGTACCACTTGC
TTCGGAAGCAAATTCATTCTCTCGAGAAAAATCGAGATACGATGAGTTGT
TTTCATATGTGGGCCTGCCTCCCTACTCCCGTCTTTTTTCTTTTTTTTTC
CTGCATCAGATCGGGCGGCTGAAGAAGCTCGTCGGACGCAAGGGGTTCAG
CAACAACCCGGCGGCCGAGATAAGCGACGTCATGAAGCTCTTCGAGGGGG
ACATGGCCGGCCTACAGAAAGACATATCGTCGCTGCAGAGGTGGGTCTCG
CGTGCGCATCACGCACGCACACCGGGAGAGGAAAATATTAACATTTCCCC
CTAAGGTACCTACTCTTCGATGGAAAGCCACCAAGGAATAGACCGTGATA
GTTCGCCGGCCCTGCATGGCCATCATGTGCAAGATGGGTCCTCTACGACA
CCACGGCTGTGGCTCTCGGGCCGTTGCCCTTTCGCTTCGCTTCGCGTTTC
GTTGTGGTGAGGTCGGCAGGCTGCGTTTCATCCTCCTACCCCGTGCGTGA
TGAAATACGTGGCCCTCAATGTCTTGCATTGTGCGGCAGGAGCTATTTGA
CCTGCTTCTGATAAAGCGGGGCGCACACTTTCCAAAACAGACGACGGAGA
CTCTACCGTACGTCGGGGAGAAAAAGAACAGTCAGATTTTATTTTCCACG
CGGCTTATCCCCACCCCGCGCCAACCTCTCCCTCCCTCCTCTCAAACTGC
CCTTGTCTGTCTGTACTAAATTTATCAGGCACGCAGATGGCGGCACCAGG
GGGAGCCCGCCGGCCAACAGCCAGCGGCAGATGCACTGCGCGTTTATCGT
GACGACGCTGCGGAGAAGCGCGCAGGAGCACACGAAGGCCTTTCGTGACG
CGCTCTTGCTGCGAGCAGCGGTGAGCGTGAAGAGGAGAGAAGGTTGCAAC
GCGTATTGCCGCTTTCTGTGACATGTGTTAAGGGGTACATGTAGGTTGTC
TTCCCTCGGGGCGCGAGGAGGAGAGCGGGGTCGGAGGGAAGCGAATGCGT
TGTACCCGGAGAGGCAAGTGGAATTTCTTGCGATTGCAAAGGCTCTCCCG
GCTTGTATTGGTAGGCGCGTCCTCATTGTTGGCGTTCCGTGTCGTGGTAA
TCCATTGCATTGACATTGGGTCTGTCGAATAGGATAAGTGGAGTCGCTGT
TGGATTTCCTCGTGATGTGCGTGCAGTAGTTATCGATCTCAGTATGGAGT
CTCATGCAGTGATGATTCGCACTCATGTATTTATAGCCTACACACGATAA
GTGAACCGCAACCAACCCCGTGCGCATTCACGATGGTGTGTTTGCTTGAA
ACGAAACCCAGGTGGAGAAGCAGCAGAACGAACGCCAGCGAAAGTTCTCG
CACTCCCGCGGCGTCGCCCCCGCGACCCAGCTGGACTACCCTCTCTTCGG
AAGCAGCGCCGGCGGCGCCGGGGGGGGGGCACGACGCCGCCGCCCGACGG
CCAATCTGGCGTCCCCCCCGCCGCCTCTCCCCGACGAAGACGACGAGGAC
AACAAGGGGCACAAACACGGACCCCGAAGAGGCGGAAAGGCTGCGTCGGT
GTTGCCGTTCCCTTCCGGCAATGGAGGCACAAGGGGGGGGGGGGGTACAG
GCGGCTCTTCCTGGCCTCAGAAATCCGCGGTGCCCCCGCCGTGGTCGGCA
GAGGGGGGGAGAAGCAGCAACGGCAACAATTTTTCGACGGGCGTTGGCAA
AGGAGGGTACGACGCCGTCGGAGCAATGCCACGAGCAACAGAAACGGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCTGCGAGAACAGACAGC
AATGGAGGGTTCAGGGCGGGGCCCCATACGGCGCCGCCCTTTGGCAGTGC
CAACGGTTACGTACCACCGGCTGCGGGGGGTGGCAGCGGGAGCGCGCATG
CGGCGGCTCCGCCAGGGTTTCCGCCTCCTCCGACCGAGGCGTCTAGAGGC
GGTGGGCGCGCCACTGGGCTGCGGAAACGACCAGGTGGGGTGCCCTGATA
GAACACCAGCAGGTCACGGAAAGTGCTGCGCGTGGAGAGCGGGGGAGGGG
ATCATGTTTGCGTTGACGGATTGTTCGTCAGGGTGCTTTCTGCGGTTTAG
CGTTCTCGCCTTTCGCTCCTTTTGTCTACACCAGTAGGAAACAGCACCAG
CACTTGCTCATGGGTTATTTTGGCGACTATTTGGTGTTTGTTTTAGACCG
TGCCGGTGCAACTCTTTCGTGGTGGCTGCTGTCCTAGTTCCTCCAACCTT
CTCGTCTTGATTTTTCCTTGCGTCTAAACGCCTCATGCAGTGGTTGGTTG
CCTTCTCTCTGTATATGCAGTCGGGCTCTCCTGCTTCGTTTCGTGCACCA
CTCCTTCGAAATTCCCTTCTGGCGCATTGCTTTGGTGCTTGCGTTCACAA
CGAACGAGCCACTGAGTTGTTGCGTTCGTTCGCTGAGGTAGAGTGAACGA
GATTTGTACGATAAACGGCAGGGAGGCTCATAAACCAAGCCCAAAATTAT
CCCCTCCCCACGCCACACACCCCGTTACGTCATGTCCCGTCGCCCCCCAG
GGCGAGAGGACGGGGGTGACGCAGAGGAGGAGTCCCGCCGAGCGGCGTGG
CAAGTTCAGGTCCAAGAGGACTCCAAGACCAGAGTGGACGAATCACACAA
GGTAAATGACACATCCAAACCTCCCAGTAAGTACTGCTTACCTTATATGG
TACGAACGTACGCTAGCCTTTGTTGTGGCCGATACTGCTGTTATTGCCCA
GACTACGCCGACTCCCGCCACCACAGCCGCCGCCACACGACCCGCCCTGC
TATATGGGCGTTACTTCGGCGGGACGAAAAGACTGCCAGGGGCGGGGTAT
CCCCCCGGACCCGTGAATGTTGCGTGTTGGGATCAGCGCGACTCCACAAA
ACGGCACCACCAGACAGCGGCGTTTACTGCGAACAAGGCGCAAAATTCTG
AAGAAAGAAGAGATGGTGAAGCTTGAGCCGATACCAAAGTAGACAGTAGA
TGGGAGAGAACGTGAGGCCAGAAAGTATGCGGTCAGTCGATTCCATATTT
TTTCATTCTTCATCTCCGTGACCAGCGCACTCGAAAACCTGACTAAAAAC
AAATACACTTAAACGAAACGAAATGTTGAAAAAAACAAAAAAACAAAATC
ACAGGTGGAGAAGATGATCGGCGATTTGGGGCAGATGTTCAGCCGTTTCT
CGACGATGGTGGCGGCGCAGGAGGAGGTGGTTATGCACATCGAGGACGAC
GTCGAGGCCGCTCACGCCTTCGCCGAAGAGGGACAGGCACACCTCGCCAA
GTGAGTATCCTGGGGAACGGGATATACCATGCCGTCCAACAACGAAAATG
CGTCAGCAGGAGAATATTCATTACGATTTTTTGCTTTCGGTGGCGGGTCA
CAGAGAGACGATGGAATGTTGCTGCTTCGCAAGACCGTGTTAGTGTTACT
GCTCCGCAAGACTTACGATTTGTGGTACCACCTTGCGGAACGGGGAGAGA
GAGGCACAAATCGCAAGGCGCTTATGCTTTTTTCGCGTTGTTTGGTATGC
AAAGCTACTCTTGTTTTTTCTCAACGCGCCTCGCTTCTTCGACTTGTTCG
CGCTTTCTGGTTGCTGTTGCTTCCCGCAGGTACTACCAGATTACGAGCGG
CAACCGGGGAATCATCATCAAGGTATTCATCATGTTGATCGTTTGCATCT
GGGTCTTCCTGGGCCTTATGAGATGACACCCCCCTTCTTGTCCGCTCCAT
TAATTTTGCGTCGCCCCCCGGCCAAGAAATGCGGAGAGCGCCGACATACA
TCAACTGCGTTTGCACCAACGCCGTTGCCATCGAAGGGCTTTCGTCTTGA
TCACAGCGCATGTGGGCAAGGCATTATACGTTCGTGGTCTGGTCGATGCC
CTTTGCCGGCATTAGTGCGGGTGGCGATGTATCTCTCGTGTCTTTCGGGG
TTACATGTTTGTAGCCGAGCGATATTTTGCAAGTTCGACGAGGGCGGGAG
GTCGCGCGTTGGGGGGGGGATGCCATCACGTGATCAGGAGTTCTCTACAG
CCCCATTCGTGCCTAGGAGCCCCGGCAGCGTTGCTATTTAGGTTTGTGTT
CCTCGCGTGGCACCCTTTGGCCGTATTGCGTCAGTCGGCCTGTCGAGTAG
TTGACTGGCCAGATAATGCAGGCAAGAACGCGTGCTTAGACAGCTTTGCA
TCGGCTGGGTCACGATGTATGTCATTTTGACATGAGGGTGTGTCCACCTG
CGAAGGAAGGGGCCTGAAAGGTGTGCATGTTTACCCTCTTCTTCACTTGG
CTGTTTTGCGCCCACTCGGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1030:13484..18803- >mRNA_E-siliculosus-1a_F_contig1030.256.1 ID=mRNA_E-siliculosus-1a_F_contig1030.256.1|Name=mRNA_E-siliculosus-1a_F_contig1030.256.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2964bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:13484..18803- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACCATGACGGACCGAACCGAGGAATTCCAACGCGCGGTCAGTGCCTT
CCGTCCCACAGTCACGGTGGTCAACAACAGCGGGGAGGCAGCGGCAATCA
GGGCGCAGACCGACCTCGGGTACAGAAAGACGTCGGAGTTTCTCCAGCTC
GCTGCAAGCGTTGCAGTCGGCTTCGAGGGCACGTCCAGGCTGATGACCAT
GACGGACCGAACCGAGGAATTCCAACGCGCGGTCAGTGCCTTCCGTCCCA
CAGTCACGGTGGTCAACAACAGCGGGGAGGCAGCGGCAATCAGGGCGCAG
ACCGACCTCGGGTACAGAAAGACGTCGGAGTTTCTCCAGCTCGCTGCAAG
CGTTGCAGTCGGCTTCGAGGGCACGTCCAGGCTGATCGGGCGGCTGAAGA
AGCTCGTCGGACGCAAGGGGTTCAGCAACAACCCGGCGGCCGAGATAAGC
GACGTCATGAAGCTCTTCGAGGGGGACATGGCCGGCCTACAGAAAGACAT
ATCGTCGCTGCAGAGATCGGGCGGCTGAAGAAGCTCGTCGGACGCAAGGG
GTTCAGCAACAACCCGGCGGCCGAGATAAGCGACGTCATGAAGCTCTTCG
AGGGGGACATGGCCGGCCTACAGAAAGACATATCGTCGCTGCAGAGGCAC
GCAGATGGCGGCACCAGGGGGAGCCCGCCGGCCAACAGCCAGCGGCAGAT
GCACTGCGCGTTTATCGTGACGACGCTGCGGAGAAGCGCGCAGGAGCACA
CGAAGGCCTTTCGTGACGCGCTCTTGCTGCGAGCAGCGGCACGCAGATGG
CGGCACCAGGGGGAGCCCGCCGGCCAACAGCCAGCGGCAGATGCACTGCG
CGTTTATCGTGACGACGCTGCGGAGAAGCGCGCAGGAGCACACGAAGGCC
TTTCGTGACGCGCTCTTGCTGCGAGCAGCGGTGGAGAAGCAGCAGAACGA
ACGCCAGCGAAAGTTCTCGCACTCCCGCGGCGTCGCCCCCGCGACCCAGC
TGGACTACCCTCTCTTCGGAAGCAGCGCCGGCGGCGCCGGGGGGGGGGCA
CGACGCCGCCGCCCGACGGCCAATCTGGCGTCCCCCCCGCCGCCTCTCCC
CGACGAAGACGACGAGGACAACAAGGGGCACAAACACGGACCCCGAAGAG
GCGGAAAGGCTGCGTCGGTGTTGCCGTTCCCTTCCGGCAATGGAGGCACA
AGGGGGGGGGGGGGTACAGGCGGCTCTTCCTGGCCTCAGAAATCCGCGGT
GCCCCCGCCGTGGTCGGCAGAGGGGGGGAGAAGCAGCAACGGCAACAATT
TTTCGACGGGCGTTGGCAAAGGAGGGTACGACGCCGTCGGAGCAATGCCA
CGAGCAACAGAAACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
GGCTGCGAGAACAGACAGCAATGGAGGGTTCAGGGCGGGGCCCCATACGG
CGCCGCCCTTTGGCAGTGCCAACGGTTACGTACCACCGGCTGCGGGGGGT
GGCAGCGGGAGCGCGCATGCGGCGGCTCCGCCAGGGTTTCCGCCTCCTCC
GACCGAGGCGTCTAGAGGCGGTGGGCGCGCCACTGGGCTGCGGAAACGAC
CAGGTGGAGAAGCAGCAGAACGAACGCCAGCGAAAGTTCTCGCACTCCCG
CGGCGTCGCCCCCGCGACCCAGCTGGACTACCCTCTCTTCGGAAGCAGCG
CCGGCGGCGCCGGGGGGGGGGCACGACGCCGCCGCCCGACGGCCAATCTG
GCGTCCCCCCCGCCGCCTCTCCCCGACGAAGACGACGAGGACAACAAGGG
GCACAAACACGGACCCCGAAGAGGCGGAAAGGCTGCGTCGGTGTTGCCGT
TCCCTTCCGGCAATGGAGGCACAAGGGGGGGGGGGGGTACAGGCGGCTCT
TCCTGGCCTCAGAAATCCGCGGTGCCCCCGCCGTGGTCGGCAGAGGGGGG
GAGAAGCAGCAACGGCAACAATTTTTCGACGGGCGTTGGCAAAGGAGGGT
ACGACGCCGTCGGAGCAATGCCACGAGCAACAGAAACGGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCGGCTGCGAGAACAGACAGCAATGGAGG
GTTCAGGGCGGGGCCCCATACGGCGCCGCCCTTTGGCAGTGCCAACGGTT
ACGTACCACCGGCTGCGGGGGGTGGCAGCGGGAGCGCGCATGCGGCGGCT
CCGCCAGGGTTTCCGCCTCCTCCGACCGAGGCGTCTAGAGGCGGTGGGCG
CGCCACTGGGCTGCGGAAACGACCAGGGCGAGAGGACGGGGGTGACGCAG
AGGAGGAGTCCCGCCGAGCGGCGTGGCAAGTTCAGGTCCAAGAGGACTCC
AAGACCAGAGTGGACGAATCACACAAGGGCGAGAGGACGGGGGTGACGCA
GAGGAGGAGTCCCGCCGAGCGGCGTGGCAAGTTCAGGTCCAAGAGGACTC
CAAGACCAGAGTGGACGAATCACACAAGGTGGAGAAGATGATCGGCGATT
TGGGGCAGATGTTCAGCCGTTTCTCGACGATGGTGGCGGCGCAGGAGGAG
GTGGTTATGCACATCGAGGACGACGTCGAGGCCGCTCACGCCTTCGCCGA
AGAGGGACAGGCACACCTCGCCAAGTGGAGAAGATGATCGGCGATTTGGG
GCAGATGTTCAGCCGTTTCTCGACGATGGTGGCGGCGCAGGAGGAGGTGG
TTATGCACATCGAGGACGACGTCGAGGCCGCTCACGCCTTCGCCGAAGAG
GGACAGGCACACCTCGCCAAGTACTACCAGATTACGAGCGGCAACCGGGG
AATCATCATCAAGGTATTCATCATGTTGATCGTTTGCATCTGGGTCTTCC
TGGGCCTTATGAGATGAGTACTACCAGATTACGAGCGGCAACCGGGGAAT
CATCATCAAGGTATTCATCATGTTGATCGTTTGCATCTGGGTCTTCCTGG
GCCTTATGAGATGA back to top
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