mRNA_E-siliculosus-1a_F_contig14338.2550.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14338.2550.1
Unique NamemRNA_E-siliculosus-1a_F_contig14338.2550.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: UPI001EF0ADDD (nucleotide sugar dehydrogenase n=1 Tax=Halomonas profundi TaxID=2852117 RepID=UPI001EF0ADDD)

HSP 1 Score: 608 bits (1569), Expect = 1.160e-217
Identity = 311/364 (85.44%), Postives = 335/364 (92.03%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            EVVALDIV ERVAMLNA QSPIEDAEI+E L  R L  TATLD   AY+  D+V+IATPTDYDPVTNTF+T SVEAVIQDV+ INP+AVMVIKSTVPVGYTAEA QRFAT NL+FSPEFLREGKALYDNL+PTRIIVGERSERA+IFA LLKQGAIKQD+ VL TNS EAEAIKLFANTYLAMRVAYFNELDTYAESH+LDT+QIIEGVGLDPRIG+HYNNPSFGYGGYCLPKDTKQLLANYQ+VPSNMIQA+VDANRTRKDFIAEQVLARKP VVGVYRLIMK+GSDNFRASAMQGVMKRIKAKG+EV+VYEPVLEE TFYGS+V+ DLAAFK +AD+ILSNRM  EL+DV  KVYTRDLFGS
Sbjct:   24 EVVALDIVPERVAMLNAGQSPIEDAEIQEFLVSRELKFTATLDRDLAYRQVDYVVIATPTDYDPVTNTFDTSSVEAVIQDVMTINPKAVMVIKSTVPVGYTAEACQRFATDNLIFSPEFLREGKALYDNLYPTRIIVGERSERAEIFAGLLKQGAIKQDMPVLLTNSTEAEAIKLFANTYLAMRVAYFNELDTYAESHDLDTQQIIEGVGLDPRIGSHYNNPSFGYGGYCLPKDTKQLLANYQDVPSNMIQAIVDANRTRKDFIAEQVLARKPRVVGVYRLIMKSGSDNFRASAMQGVMKRIKAKGVEVIVYEPVLEETTFYGSKVVDDLAAFKAQADVILSNRMAAELQDVISKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: U7NQS3_9GAMM (UDP-glucose 6-dehydrogenase n=3 Tax=Halomonas TaxID=2745 RepID=U7NQS3_9GAMM)

HSP 1 Score: 603 bits (1554), Expect = 2.240e-215
Identity = 308/364 (84.62%), Postives = 334/364 (91.76%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            +VVALDIV+E+V  LNA +SPIEDAEI + LA R LN TATLD  AAY+DADFV+IATPTDYDPVTN F+T SVEAVIQ+V+AINP+AVMVIKSTVPVGYTAEA QRF T NLLFSPEFLREG+ALYDNLHP+RIIVGERS RA+ FA LL QGA+K D+ VLFTNS EAEAIKLFANTYLAMRVAYFNELDTYAE+H LDTRQIIEGVGLDPRIG+HY+NPSFGYGGYCLPKDTKQLLANYQ+VPSN+IQAVVDANRTRKDFIAEQVLARKP VVGVYRLIMK GSDNFRASAMQGVMKRIKAKGIEV+VYEPVLEE TF+GSRVIRDL AFK EAD+ILSNRM +EL DVA+KVYTRDLFGS
Sbjct:   24 DVVALDIVAEKVEALNAGRSPIEDAEISDFLAHRELNFTATLDKQAAYRDADFVVIATPTDYDPVTNHFDTSSVEAVIQEVMAINPEAVMVIKSTVPVGYTAEACQRFGTQNLLFSPEFLREGRALYDNLHPSRIIVGERSARAEAFAGLLVQGAVKHDIPVLFTNSTEAEAIKLFANTYLAMRVAYFNELDTYAETHGLDTRQIIEGVGLDPRIGSHYHNPSFGYGGYCLPKDTKQLLANYQDVPSNLIQAVVDANRTRKDFIAEQVLARKPGVVGVYRLIMKAGSDNFRASAMQGVMKRIKAKGIEVIVYEPVLEEATFFGSRVIRDLEAFKAEADVILSNRMAEELDDVADKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: A0A5K1I955_9GAMM (UDP-glucose 6-dehydrogenase n=1 Tax=Halomonas lysinitropha TaxID=2607506 RepID=A0A5K1I955_9GAMM)

HSP 1 Score: 598 bits (1543), Expect = 1.060e-213
Identity = 304/364 (83.52%), Postives = 332/364 (91.21%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            EVVALDIV+E+VA LN + SPIED EI + LA R LNL+ATLD   AY  AD V+IATPTDYDP TN F+T SVEAVIQDVIAINPQA+MVIKSTVPVGYT EAS+RFAT NL+FSPEFLREG+ALYDNLHP+RIIVGERSERA+ FA LLKQGA+K+ + VLFTNS EAEAIKLFANTYLAMRVAYFNELDTYAE+H LDTRQIIEGVGLDPRIG+HY+NPSFGYGGYCLPKDTKQLLANY  VP+NMIQA+VDANRTRKDFIAEQVLAR+P VVGVYRLIMK+GSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEE+TF+GSRV+RDL AFKQEAD+ILSNRM DEL DV +KVYTRDLFGS
Sbjct:   24 EVVALDIVAEKVAQLNDRVSPIEDVEISDFLANRDLNLSATLDRQQAYDGADIVVIATPTDYDPQTNVFDTSSVEAVIQDVIAINPQALMVIKSTVPVGYTVEASERFATRNLIFSPEFLREGRALYDNLHPSRIIVGERSERAETFAGLLKQGAVKEAIPVLFTNSTEAEAIKLFANTYLAMRVAYFNELDTYAETHGLDTRQIIEGVGLDPRIGHHYHNPSFGYGGYCLPKDTKQLLANYSEVPNNMIQAIVDANRTRKDFIAEQVLARRPEVVGVYRLIMKSGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEEDTFFGSRVLRDLEAFKQEADVILSNRMADELADVRDKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: A0A3B7LAP7_9GAMM (UDP-glucose 6-dehydrogenase n=4 Tax=Halomonas TaxID=2745 RepID=A0A3B7LAP7_9GAMM)

HSP 1 Score: 591 bits (1523), Expect = 1.170e-210
Identity = 303/363 (83.47%), Postives = 326/363 (89.81%), Query Frame = 1
Query:    4 VVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            VVA+DIV ERVAMLN  +SPIEDAEI E LA R L+ TATLD  AAY+DADFV+IATPTDYDP TNTF+T +VEAVIQDV+AINP AVMVIKSTVPVGYTAEAS+RF T NL+FSPEFLREG+ALYDNLHP+RIIVGE S R + FA LLKQGA+  ++ VLFTNS EAEAIKLFANTYLAMRVAYFNELD+YAE+H LDTRQIIEGVGLDPRIG HYNNPSFGYGGYCLPKDTKQLLANYQNVPSN+I A+VDANRTRKDFIAEQ+L R P VVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVL E TF+GSRVIRDL AFK EAD+ILSNRM  EL DVAEKVYTRDLFGS
Sbjct:   25 VVAVDIVPERVAMLNEGRSPIEDAEISEFLAHRQLDFTATLDKEAAYRDADFVVIATPTDYDPKTNTFDTSNVEAVIQDVMAINPGAVMVIKSTVPVGYTAEASRRFGTENLIFSPEFLREGRALYDNLHPSRIIVGEHSPRGEAFAGLLKQGALDDEIPVLFTNSTEAEAIKLFANTYLAMRVAYFNELDSYAETHGLDTRQIIEGVGLDPRIGKHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNIIAAIVDANRTRKDFIAEQILKRHPRVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLAEKTFFGSRVIRDLDAFKAEADVILSNRMAAELDDVAEKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: A0A1A0FLU0_9GAMM (UDP-glucose 6-dehydrogenase n=1 Tax=Halomonas sp. G11 TaxID=1684425 RepID=A0A1A0FLU0_9GAMM)

HSP 1 Score: 591 bits (1523), Expect = 1.170e-210
Identity = 297/364 (81.59%), Postives = 329/364 (90.38%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            +V+ALDIV E+VA+LN + SPI+D E+ + LA R LN TATLD VAAY+ ADFVIIATPTDYDP TN FNT+SVE VIQDVI INP AVMVIKSTVPVGYTAEAS+RF T NL+FSPEFLREGKALYDNLHP+RIIVGERSERA+ FASLLKQGAI++DV VLF NS EAEAIKLFANTYLAMRVAYFNELD+YAESH LD RQIIEGVGLDPRIG HYNNPSFGYGGYCLPKDTKQLLANY  VP+NMIQA+VDANRTRKDF+AEQ++ R+P VVGVYRLIMKTGSDNFRASAMQGVMKR+KAKGIEVVV+EP LE++TF+GSRV+RDL AFK EAD+ILSNRMV EL+DV  KVYTRDLFG+
Sbjct:   24 DVIALDIVPEKVALLNDRHSPIQDNEVSQFLANRDLNFTATLDKVAAYRHADFVIIATPTDYDPATNYFNTQSVETVIQDVIEINPDAVMVIKSTVPVGYTAEASKRFGTQNLIFSPEFLREGKALYDNLHPSRIIVGERSERAETFASLLKQGAIEKDVPVLFANSTEAEAIKLFANTYLAMRVAYFNELDSYAESHGLDARQIIEGVGLDPRIGKHYNNPSFGYGGYCLPKDTKQLLANYDEVPNNMIQAIVDANRTRKDFVAEQIIKRQPKVVGVYRLIMKTGSDNFRASAMQGVMKRVKAKGIEVVVFEPALEDDTFFGSRVLRDLDAFKAEADVILSNRMVPELEDVRSKVYTRDLFGT 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: A0A7Y3TWT9_9GAMM (UDP-glucose 6-dehydrogenase n=1 Tax=Halomonas azerica TaxID=2732867 RepID=A0A7Y3TWT9_9GAMM)

HSP 1 Score: 591 bits (1523), Expect = 1.170e-210
Identity = 295/364 (81.04%), Postives = 331/364 (90.93%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            +VVA+DIV E+V +LN   SPIED EI + L+ R L+ TATLD   AYQ+ADFVIIATPTDYDP TN FNT+SVEAVI+DV+AINP AVMVIKSTVPVGYTAEA +RF T NL+FSPEFLREGKAL+DNLHP+RIIVGERS+RA+ FA+LLKQGAIKQD+ VLFTNS EAEAIKLFANTYLAMRVAYFNELDTYAE+H LDTRQIIEGVGLDPRIG HYNNPSFGYGGYCLPKDTKQLLANY++VPSNM+QA+VDANRTRKDFI+EQVL R+P +VGVYRLIMKTGSDNFRASAMQGVMKRIKAKG+EV+V+EP LEE TF+GSRV+RDL AFKQEAD++LSNRM  EL+D+A KVYTRDLFGS
Sbjct:   24 DVVAVDIVPEKVDLLNQGISPIEDTEISDFLSNRELSFTATLDKRLAYQNADFVIIATPTDYDPKTNYFNTQSVEAVIEDVLAINPDAVMVIKSTVPVGYTAEACERFGTRNLIFSPEFLREGKALFDNLHPSRIIVGERSDRAETFAALLKQGAIKQDIDVLFTNSTEAEAIKLFANTYLAMRVAYFNELDTYAETHGLDTRQIIEGVGLDPRIGKHYNNPSFGYGGYCLPKDTKQLLANYEDVPSNMVQAIVDANRTRKDFISEQVLKRQPKIVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGVEVIVFEPALEEETFFGSRVLRDLEAFKQEADVVLSNRMAPELEDIASKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: U7P8I8_9GAMM (UDP-glucose 6-dehydrogenase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=U7P8I8_9GAMM)

HSP 1 Score: 591 bits (1523), Expect = 1.170e-210
Identity = 303/364 (83.24%), Postives = 330/364 (90.66%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            +VVALDIV E+V  LNA +SPIEDAEI + LA R L+ TATLD   AY+DAD V+IATPTDYDP TN F+T SVEAVIQDV+AINP A+MVIKSTVPVGYT EAS+RF T NLLFSPEFLREGKAL+DNLHP+RIIVGERSERA+ FASLL+QGA K D+ VLFTNS EAEAIKLFANTYLAMRVAYFNELDTYAESH LDTRQIIEGVGLDPRIG HYNNPSFGYGGYCLPKDTKQLLANYQ+VP+N+IQAVVDANRTRKDFIAEQVLAR+P VVG+YRLIMK GSDNFRASAMQGVMKR+KAKGIEV+V+EPVLEE TF+GSRVIRDLAAFK EAD+ILSNRM   L+DVAEKVYTRDLFGS
Sbjct:   24 QVVALDIVPEKVEALNAGRSPIEDAEISDFLAHRELDFTATLDRELAYRDADLVLIATPTDYDPQTNVFDTTSVEAVIQDVMAINPGALMVIKSTVPVGYTVEASRRFGTENLLFSPEFLREGKALHDNLHPSRIIVGERSERAEAFASLLRQGAEKTDIPVLFTNSTEAEAIKLFANTYLAMRVAYFNELDTYAESHGLDTRQIIEGVGLDPRIGTHYNNPSFGYGGYCLPKDTKQLLANYQDVPNNLIQAVVDANRTRKDFIAEQVLARRPRVVGIYRLIMKAGSDNFRASAMQGVMKRLKAKGIEVIVFEPVLEEATFFGSRVIRDLAAFKAEADVILSNRMAAALEDVAEKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: UPI001554A878 (nucleotide sugar dehydrogenase n=1 Tax=Halomonas sp. B1.N12 TaxID=2591147 RepID=UPI001554A878)

HSP 1 Score: 590 bits (1520), Expect = 3.360e-210
Identity = 298/363 (82.09%), Postives = 329/363 (90.63%), Query Frame = 1
Query:    4 VVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            VVALDIV E+VA+LNA QSPIEDAE+ E LA R LN TATLD  AAY+ ADFVIIATPTDYDP TN F+T+SVEAVIQDV+AINP AVMVIKSTVPVGYTAEA +RF T NL+FSPEFLREGKALYDNL+P+RIIVGERSERA+ FA LL+QGA+KQD  VLFTNS EAEAIKLFANTYLAMRVAYFNELD+YAE H LDTRQIIEGVGLDPRIG HYNNPSFGYGGYCLPKDTKQLLANY  VP+NMIQA+VDANRTRKDFIAEQ++ ++P VVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVV+EP L+++TF+GSRV+R+L AFK EADI+L+NRM  EL D+AEKVYTRDLFGS
Sbjct:   25 VVALDIVPEKVALLNAGQSPIEDAEVSEFLATRELNFTATLDKEAAYRGADFVIIATPTDYDPATNYFDTQSVEAVIQDVVAINPDAVMVIKSTVPVGYTAEAGERFNTQNLIFSPEFLREGKALYDNLYPSRIIVGERSERAETFAGLLQQGAVKQDAPVLFTNSTEAEAIKLFANTYLAMRVAYFNELDSYAECHGLDTRQIIEGVGLDPRIGKHYNNPSFGYGGYCLPKDTKQLLANYNEVPNNMIQAIVDANRTRKDFIAEQIIKQQPKVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVFEPALKDDTFFGSRVLRNLEAFKAEADIVLTNRMASELDDIAEKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: A0A2P7PCB4_9GAMM (UDP-glucose 6-dehydrogenase n=5 Tax=Halomonas TaxID=2745 RepID=A0A2P7PCB4_9GAMM)

HSP 1 Score: 588 bits (1515), Expect = 1.940e-209
Identity = 298/364 (81.87%), Postives = 334/364 (91.76%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            +VVALDIV+E+VA LN + SPIEDAEI + LA R+L+ TATLD   AY+DADFV+IATPTDYDP TN FNT +VEAVI+DV+AINP AVMVIKSTVPVGYTAEA QRF T NLLFSPEFLREGKALYDNL+P+RIIVGERSERA+ FA LL+QGA+K++V VL+TNS EAEAIKLFANTYLAMRVAYFNELDTYAE+H LD+RQIIEGVGLDPRIG+HY+NPSFGYGGYCLPKDTKQLLANYQ+VP+N+IQA+VDAN TRKDFIAE V+ R+P VVGVYRLIMK GSDNFRASAMQGVMKR+KAKGIEVVVYEPVLEE+TFYGSRV+RDL AFKQEA++ILSNRMV EL+DVA KVYTRDLFGS
Sbjct:   24 QVVALDIVAEKVAQLNDRVSPIEDAEISDFLANRALDFTATLDKEVAYRDADFVVIATPTDYDPETNYFNTSTVEAVIRDVMAINPAAVMVIKSTVPVGYTAEACQRFGTDNLLFSPEFLREGKALYDNLYPSRIIVGERSERAETFAGLLEQGAVKEEVPVLYTNSTEAEAIKLFANTYLAMRVAYFNELDTYAETHGLDSRQIIEGVGLDPRIGSHYHNPSFGYGGYCLPKDTKQLLANYQDVPNNLIQAIVDANTTRKDFIAESVIRRQPRVVGVYRLIMKAGSDNFRASAMQGVMKRLKAKGIEVVVYEPVLEEDTFYGSRVMRDLDAFKQEAELILSNRMVAELEDVAHKVYTRDLFGS 387          
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Match: A0A510X3B9_9GAMM (UDP-glucose 6-dehydrogenase n=3 Tax=Halomonas TaxID=2745 RepID=A0A510X3B9_9GAMM)

HSP 1 Score: 588 bits (1515), Expect = 1.940e-209
Identity = 297/364 (81.59%), Postives = 333/364 (91.48%), Query Frame = 1
Query:    1 EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQDADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGYTAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASLLKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNLDTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMIQAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELKDVAEKVYTRDLFGS 1092
            EVVALDIV E+VAMLN ++SPIEDAEI + LA R L+ TATL   AAY+ ADFV+IATPTDYDP TN FNT +VEAVI+DV+AINP+AVMVIKSTVPVGYTAEAS+RF T NL+FSPEFLREGKALYDNL+P+RIIVGERS RA++FA LLKQGA+K++V VLFTNS EAEAIKLFANTYLAMRVAYFNELDTYAE+H LDTRQIIEGVGLDPRIG+HY+NPSFGYGGYCLPKDTKQLLANYQ VP+N+IQA+VDAN TRKDFIAE V+ R+P +VGV+RLIMK GSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEE TF+ SRVIRDL AFK+E+D+IL+NRMVDEL DVA+KVYTRDLFGS
Sbjct:   24 EVVALDIVPEKVAMLNDRRSPIEDAEISDFLANRKLHFTATLGKEAAYRGADFVVIATPTDYDPETNYFNTSTVEAVIEDVMAINPEAVMVIKSTVPVGYTAEASERFGTDNLIFSPEFLREGKALYDNLYPSRIIVGERSARAEVFAGLLKQGAVKEEVPVLFTNSTEAEAIKLFANTYLAMRVAYFNELDTYAETHGLDTRQIIEGVGLDPRIGSHYHNPSFGYGGYCLPKDTKQLLANYQEVPNNLIQAIVDANTTRKDFIAESVIKRQPRIVGVHRLIMKAGSDNFRASAMQGVMKRIKAKGIEVVVYEPVLEEETFFNSRVIRDLDAFKRESDLILANRMVDELADVADKVYTRDLFGS 387          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14338.2550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001EF0ADDD1.160e-21785.44nucleotide sugar dehydrogenase n=1 Tax=Halomonas p... [more]
U7NQS3_9GAMM2.240e-21584.62UDP-glucose 6-dehydrogenase n=3 Tax=Halomonas TaxI... [more]
A0A5K1I955_9GAMM1.060e-21383.52UDP-glucose 6-dehydrogenase n=1 Tax=Halomonas lysi... [more]
A0A3B7LAP7_9GAMM1.170e-21083.47UDP-glucose 6-dehydrogenase n=4 Tax=Halomonas TaxI... [more]
A0A1A0FLU0_9GAMM1.170e-21081.59UDP-glucose 6-dehydrogenase n=1 Tax=Halomonas sp. ... [more]
A0A7Y3TWT9_9GAMM1.170e-21081.04UDP-glucose 6-dehydrogenase n=1 Tax=Halomonas azer... [more]
U7P8I8_9GAMM1.170e-21083.24UDP-glucose 6-dehydrogenase n=2 Tax=unclassified H... [more]
UPI001554A8783.360e-21082.09nucleotide sugar dehydrogenase n=1 Tax=Halomonas s... [more]
A0A2P7PCB4_9GAMM1.940e-20981.87UDP-glucose 6-dehydrogenase n=5 Tax=Halomonas TaxI... [more]
A0A510X3B9_9GAMM1.940e-20981.59UDP-glucose 6-dehydrogenase n=3 Tax=Halomonas TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14338contigE-siliculosus-1a_F_contig14338:31..1128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1098
Model size1098
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.M
EC1.1.1.22
EggNOG OGs1MW5U@1224,1RMVW@1236,1XIGZ@135619,COG1004@1,COG1004@2
EggNOG free text desc.Belongs to the UDP-glucose GDP-mannose dehydrogenase family
KEGG ModuleM00014,M00129,M00361,M00362
KEGG Pathwayko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100
KEGG ReactionR00286
KEGG koko:K00012
KEGG rclassRC00291
Preferred nameugd
Seed eggNOG ortholog1397528.Q671_09530
Seed ortholog evalue1.4e-169
Seed ortholog score602.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927947.6712863-CDS-E-siliculosus-1a_F_contig14338:30..11281622927947.6712863-CDS-E-siliculosus-1a_F_contig14338:30..1128Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14338 31..1128 -
1696318748.9262016-CDS-E-siliculosus-1a_F_contig14338:30..11281696318748.9262016-CDS-E-siliculosus-1a_F_contig14338:30..1128Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14338 31..1128 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14338.2550.1prot_E-siliculosus-1a_F_contig14338.2550.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14338 31..1128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14338.2550.1

>prot_E-siliculosus-1a_F_contig14338.2550.1 ID=prot_E-siliculosus-1a_F_contig14338.2550.1|Name=mRNA_E-siliculosus-1a_F_contig14338.2550.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=366bp
EVVALDIVSERVAMLNAKQSPIEDAEIEELLAERSLNLTATLDCVAAYQD
ADFVIIATPTDYDPVTNTFNTESVEAVIQDVIAINPQAVMVIKSTVPVGY
TAEASQRFATFNLLFSPEFLREGKALYDNLHPTRIIVGERSERADIFASL
LKQGAIKQDVQVLFTNSMEAEAIKLFANTYLAMRVAYFNELDTYAESHNL
DTRQIIEGVGLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQNVPSNMI
QAVVDANRTRKDFIAEQVLARKPNVVGVYRLIMKTGSDNFRASAMQGVMK
RIKAKGIEVVVYEPVLEENTFYGSRVIRDLAAFKQEADIILSNRMVDELK
DVAEKVYTRDLFGSG*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig14338:31..1128-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14338.2550.1 ID=mRNA_E-siliculosus-1a_F_contig14338.2550.1|Name=mRNA_E-siliculosus-1a_F_contig14338.2550.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1098bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14338:31..1128- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGGTGGTGGCGCTGGATATTGTTTCTGAGCGTGTGGCTATGCTTAATGC TAAGCAATCACCCATCGAAGATGCTGAAATTGAAGAGTTGTTGGCTGAGC GTTCGCTTAATTTAACAGCGACGTTAGACTGTGTGGCTGCTTACCAAGAC GCAGATTTCGTTATCATTGCTACTCCTACCGACTACGACCCCGTTACCAA TACGTTTAATACGGAAAGCGTAGAAGCGGTAATTCAGGATGTGATTGCCA TTAATCCTCAGGCAGTGATGGTAATTAAATCCACTGTCCCGGTGGGGTAT ACCGCAGAGGCTTCTCAGCGATTTGCTACCTTCAACTTGCTGTTCTCGCC GGAATTCCTGCGTGAGGGTAAAGCTCTTTATGACAACCTGCACCCTACTC GCATCATCGTGGGCGAACGCTCTGAACGCGCTGACATCTTTGCCAGCTTG CTTAAGCAGGGCGCAATTAAGCAAGATGTACAGGTGCTATTTACCAACAG CATGGAAGCAGAAGCCATTAAGCTGTTTGCCAATACCTACCTAGCCATGC GCGTTGCTTATTTTAATGAGCTGGATACCTACGCGGAAAGCCATAACCTG GATACCCGGCAGATTATTGAAGGAGTGGGATTAGACCCACGCATTGGTAA TCACTATAACAACCCTTCGTTTGGCTATGGAGGCTATTGCTTACCTAAAG ATACCAAGCAGTTGTTGGCTAATTACCAAAATGTGCCCAGTAATATGATT CAGGCAGTTGTAGACGCCAACCGCACTCGTAAGGATTTTATTGCCGAACA AGTATTAGCACGAAAGCCTAACGTGGTGGGAGTTTATCGGCTGATTATGA AGACTGGCTCTGATAACTTCCGCGCTAGCGCCATGCAGGGCGTGATGAAG CGTATTAAAGCCAAAGGGATTGAGGTGGTGGTTTACGAGCCAGTGCTGGA AGAGAATACGTTTTACGGTTCGCGTGTCATTCGTGACTTGGCTGCTTTTA AGCAAGAGGCTGACATCATTCTTAGCAACCGCATGGTGGATGAGTTGAAA GATGTTGCAGAGAAGGTTTACACCCGGGATCTATTTGGAAGCGGCTAA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14338:31..1128-

>mRNA_E-siliculosus-1a_F_contig14338.2550.1 ID=mRNA_E-siliculosus-1a_F_contig14338.2550.1|Name=mRNA_E-siliculosus-1a_F_contig14338.2550.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2196bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14338:31..1128- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGGTGGTGGCGCTGGATATTGTTTCTGAGCGTGTGGCTATGCTTAATGC
TAAGCAATCACCCATCGAAGATGCTGAAATTGAAGAGTTGTTGGCTGAGC
GTTCGCTTAATTTAACAGCGACGTTAGACTGTGTGGCTGCTTACCAAGAC
GCAGATTTCGTTATCATTGCTACTCCTACCGACTACGACCCCGTTACCAA
TACGTTTAATACGGAAAGCGTAGAAGCGGTAATTCAGGATGTGATTGCCA
TTAATCCTCAGGCAGTGATGGTAATTAAATCCACTGTCCCGGTGGGGTAT
ACCGCAGAGGCTTCTCAGCGATTTGCTACCTTCAACTTGCTGTTCTCGCC
GGAATTCCTGCGTGAGGGTAAAGCTCTTTATGACAACCTGCACCCTACTC
GCATCATCGTGGGCGAACGCTCTGAACGCGCTGACATCTTTGCCAGCTTG
CTTAAGCAGGGCGCAATTAAGCAAGATGTACAGGTGCTATTTACCAACAG
CATGGAAGCAGAAGCCATTAAGCTGTTTGCCAATACCTACCTAGCCATGC
GCGTTGCTTATTTTAATGAGCTGGATACCTACGCGGAAAGCCATAACCTG
GATACCCGGCAGATTATTGAAGGAGTGGGATTAGACCCACGCATTGGTAA
TCACTATAACAACCCTTCGTTTGGCTATGGAGGCTATTGCTTACCTAAAG
ATACCAAGCAGTTGTTGGCTAATTACCAAAATGTGCCCAGTAATATGATT
CAGGCAGTTGTAGACGCCAACCGCACTCGTAAGGATTTTATTGCCGAACA
AGTATTAGCACGAAAGCCTAACGTGGTGGGAGTTTATCGGCTGATTATGA
AGACTGGCTCTGATAACTTCCGCGCTAGCGCCATGCAGGGCGTGATGAAG
CGTATTAAAGCCAAAGGGATTGAGGTGGTGGTTTACGAGCCAGTGCTGGA
AGAGAATACGTTTTACGGTTCGCGTGTCATTCGTGACTTGGCTGCTTTTA
AGCAAGAGGCTGACATCATTCTTAGCAACCGCATGGTGGATGAGTTGAAA
GATGTTGCAGAGAAGGTTTACACCCGGGATCTATTTGGAAGCGGCTAAGA
GGTGGTGGCGCTGGATATTGTTTCTGAGCGTGTGGCTATGCTTAATGCTA
AGCAATCACCCATCGAAGATGCTGAAATTGAAGAGTTGTTGGCTGAGCGT
TCGCTTAATTTAACAGCGACGTTAGACTGTGTGGCTGCTTACCAAGACGC
AGATTTCGTTATCATTGCTACTCCTACCGACTACGACCCCGTTACCAATA
CGTTTAATACGGAAAGCGTAGAAGCGGTAATTCAGGATGTGATTGCCATT
AATCCTCAGGCAGTGATGGTAATTAAATCCACTGTCCCGGTGGGGTATAC
CGCAGAGGCTTCTCAGCGATTTGCTACCTTCAACTTGCTGTTCTCGCCGG
AATTCCTGCGTGAGGGTAAAGCTCTTTATGACAACCTGCACCCTACTCGC
ATCATCGTGGGCGAACGCTCTGAACGCGCTGACATCTTTGCCAGCTTGCT
TAAGCAGGGCGCAATTAAGCAAGATGTACAGGTGCTATTTACCAACAGCA
TGGAAGCAGAAGCCATTAAGCTGTTTGCCAATACCTACCTAGCCATGCGC
GTTGCTTATTTTAATGAGCTGGATACCTACGCGGAAAGCCATAACCTGGA
TACCCGGCAGATTATTGAAGGAGTGGGATTAGACCCACGCATTGGTAATC
ACTATAACAACCCTTCGTTTGGCTATGGAGGCTATTGCTTACCTAAAGAT
ACCAAGCAGTTGTTGGCTAATTACCAAAATGTGCCCAGTAATATGATTCA
GGCAGTTGTAGACGCCAACCGCACTCGTAAGGATTTTATTGCCGAACAAG
TATTAGCACGAAAGCCTAACGTGGTGGGAGTTTATCGGCTGATTATGAAG
ACTGGCTCTGATAACTTCCGCGCTAGCGCCATGCAGGGCGTGATGAAGCG
TATTAAAGCCAAAGGGATTGAGGTGGTGGTTTACGAGCCAGTGCTGGAAG
AGAATACGTTTTACGGTTCGCGTGTCATTCGTGACTTGGCTGCTTTTAAG
CAAGAGGCTGACATCATTCTTAGCAACCGCATGGTGGATGAGTTGAAAGA
TGTTGCAGAGAAGGTTTACACCCGGGATCTATTTGGAAGCGGCTAA
back to top