mRNA_E-siliculosus-1a_F_contig1030.254.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A6H5KTF5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF5_9PHAE) HSP 1 Score: 348 bits (893), Expect = 4.450e-113 Identity = 241/271 (88.93%), Postives = 245/271 (90.41%), Query Frame = 1 Query: 79 MVFLYKALAASSCSVCLASAFVASPPAPPLPAAAVRGSSSRRDSSSFRRVRPRHSSGSRAEARLPPLLLSSRTVDVDVIXXXXXXXXXXXXXXXXXXXXXRIGRRYKGRPAAEVAKDVRELLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDWRGGKLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
M FLYKALAA SCSVCLASAFVA+PPAPP A VRG SSRRDSSS RRVRPRHSSGSR R+PPLLLSSRTVDVDVIXXXXXXXXXXXXXXXXXXXXX IGRRYKGRPAAEVAKDVR+LLDEALKIFRDAGPQVVGARGFRASRAVLLTLTD+VRDWR GKLLRPK E XXXXXXXXXXXXXXXXXX ALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE
Sbjct: 1 MGFLYKALAAGSCSVCLASAFVATPPAPPA-VAVVRGCSSRRDSSSCRRVRPRHSSGSRTAYRVPPLLLSSRTVDVDVIXXXXXXXXXXXXXXXXXXXXXXIGRRYKGRPAAEVAKDVRDLLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDLVRDWREGKLLRPKRENGGXXXXXXXXXXXXXXXXXX---------ALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 261
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A835YPW4_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW4_9STRA) HSP 1 Score: 114 bits (284), Expect = 8.200e-25 Identity = 66/164 (40.24%), Postives = 93/164 (56.71%), Query Frame = 1 Query: 400 GRPAAEVAKDVRELLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDWRGGKLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
GR + +++ L ++ + + RDAG +V AR +A +AVL T DV+RD +P SEG ++L A A+ LRLLFER+GATY+KLGQFIASSPTLFP E+V+E QKCLD+TEP+P+S ++ I++ E
Sbjct: 49 GRDPEVLQAEIQRLAEDIVGVARDAGGRVGVARTLKAVQAVLTTTRDVLRDRAASG--KPLSEGL--------------------------------KDLSTADTAKYLRLLFERMGATYVKLGQFIASSPTLFPGEFVMEMQKCLDSTEPIPFSTVIRIIRRE 178
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A0G4FU95_9ALVE (ABC1 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FU95_9ALVE) HSP 1 Score: 105 bits (263), Expect = 7.470e-22 Identity = 67/172 (38.95%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 403 RPAAEVAKDVRELLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDWRGG--KLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAG-------AARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
R EVAK+ +++ EAL+I + G V RG +AS+A ++T +V+R+ S + +LD A + +ALR LFERLG+TYIKLGQFIASSPTLFPPEYV EFQKCLD TEP+P++ I I++ E
Sbjct: 103 RSLDEVAKEAQDITREALEIVMNTGVDVALQRGLKASQAGVITALEVIREMAASANSTSGSPSSSSTASSLPEPLRSIVPPQVAAALPDLSKLNQIDPSKLDAATLLSSIPHSPQALRRLFERLGSTYIKLGQFIASSPTLFPPEYVKEFQKCLDKTEPLPWAVISKIIQTE 274
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A7S0XPK8_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XPK8_HEMAN) HSP 1 Score: 103 bits (257), Expect = 4.180e-21 Identity = 69/165 (41.82%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 403 RPAAEVAKDVRELLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDW--RGGKLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
R E+ K+ RELL E +++ P + R ASRAVLLT D+ + RGG++ + E +EL A LRLLFERLG TYIKLGQFIASSPTLFP YV EFQKCLD+TE VP+ +I +IV+ E
Sbjct: 93 RTPEEIVKEGRELLQEGIEVLLKTPPNIGLRRTLLASRAVLLTAVDLANTFQGRGGRVTQEDIE----------------------------------RELPSA-----LRLLFERLGPTYIKLGQFIASSPTLFPAAYVEEFQKCLDSTEKVPFERIKSIVQAE 218
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A7S4N0D6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N0D6_GUITH) HSP 1 Score: 98.2 bits (243), Expect = 2.740e-19 Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 400 GRPAAEVAKDVRELLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDWRG-GKLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
GR A +++++ +L+ EA ++ + PQV R +A+RAVLLT ++++++ + G+ P +E A A +R LFE LGATY+KLGQF+ASSPTLFP EYV EFQKCLD+TE VP+S+I I++++
Sbjct: 71 GRTAEDISREANKLIQEAFQLASETPPQVGIRRTVQAARAVLLTGSELLQNLQALGRA--PTTEDVI------------------------------------AQAPATIRRLFELLGATYVKLGQFVASSPTLFPAEYVKEFQKCLDSTESVPFSQIKRIIEDD 197
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A7J7QGJ7_9CHLO (ABC1 family-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QGJ7_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 4.110e-19 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 682 LSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
LSG +LDP LR LFERLGATYIKLGQFIASSP+LFP EYVLEFQKCLD T+PVP+S I I+++E
Sbjct: 72 LSGGQLDPPQVV--LRKLFERLGATYIKLGQFIASSPSLFPEEYVLEFQKCLDRTDPVPFSSIQRILRQE 139
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A383VR21_TETOB (Protein kinase domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VR21_TETOB) HSP 1 Score: 96.3 bits (238), Expect = 1.290e-18 Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 682 LSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
LSG LDP LR LFERLGATYIKLGQFIASSP+LFP EYVLEFQKCLD T+PVP++ I I+K+E
Sbjct: 105 LSGGRLDPPQVV--LRKLFERLGATYIKLGQFIASSPSLFPEEYVLEFQKCLDRTDPVPFATIQRILKQE 172
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A7S1MGI8_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MGI8_ALECA) HSP 1 Score: 95.9 bits (237), Expect = 1.390e-18 Identity = 62/148 (41.89%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 448 EALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDWRGGKLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
+ L + R AGPQ R +A+RA LLT D++RD +LL S G EL AR LR FE+LGATY+KLGQFIASSPTLFP YV EFQKCLD TE + +I IV++E
Sbjct: 1 DILGVIRTAGPQAGALRSLQAARAGLLTAADLLRDGDAAELLTALSTGRPPK-----------------------------DEL----IARVLRTFFEKLGATYVKLGQFIASSPTLFPEAYVREFQKCLDKTEETSFRRIERIVEKE 115
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: E1Z325_CHLVA (Protein kinase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z325_CHLVA) HSP 1 Score: 95.5 bits (236), Expect = 1.780e-18 Identity = 48/63 (76.19%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 703 PAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
P G A LR LFERLGATYIKLGQFIASSPTLFP EYVLEFQKCLD+TEPVP+ I V+ E
Sbjct: 59 PEGPAIVLRKLFERLGATYIKLGQFIASSPTLFPEEYVLEFQKCLDSTEPVPFEVIRRTVESE 121
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Match: A0A4D9CYJ6_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYJ6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.150e-18 Identity = 59/151 (39.07%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 439 LLDEALKIFRDAGPQVVGARGFRASRAVLLTLTDVVRDWRGGKLLRPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSGQELDPAGAARALRLLFERLGATYIKLGQFIASSPTLFPPEYVLEFQKCLDATEPVPYSKILAIVKEE 891
LL E+L++ R+ GP+ AR A++A T DV+ + R + +G A A++LR LFERLGATYIK+GQFIASSPTLFP E+VLEFQKCLD + PVPYS + + E
Sbjct: 37 LLQESLRVAREVGPRAGFARTLSATKAFSETARDVLVELRNYQQXXXXXXXS------------------------------AGSPFTRAALAKSLRQLFERLGATYIKIGQFIASSPTLFPEEFVLEFQKCLDQSAPVPYSVVRETLSAE 157 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1030.254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1030.254.1 >prot_E-siliculosus-1a_F_contig1030.254.1 ID=prot_E-siliculosus-1a_F_contig1030.254.1|Name=mRNA_E-siliculosus-1a_F_contig1030.254.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=298bp MTTAYSTTLSDRSAPLFLDYSTSTGAMVFLYKALAASSCSVCLASAFVASback to top mRNA from alignment at E-siliculosus-1a_F_contig1030:4125..7478- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1030.254.1 ID=mRNA_E-siliculosus-1a_F_contig1030.254.1|Name=mRNA_E-siliculosus-1a_F_contig1030.254.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3354bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:4125..7478- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1030:4125..7478- >mRNA_E-siliculosus-1a_F_contig1030.254.1 ID=mRNA_E-siliculosus-1a_F_contig1030.254.1|Name=mRNA_E-siliculosus-1a_F_contig1030.254.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1788bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:4125..7478- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |