mRNA_E-siliculosus-1a_F_contig103.251.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 963 bits (2490), Expect = 0.000e+0 Identity = 627/673 (93.16%), Postives = 633/673 (94.06%), Query Frame = 1 Query: 91 MSSSASTGRLQEEVESGVGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGSNTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDHPDAEGPEXXXXXXXXXXXXXX------KASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTKTAEEEVEDARAAXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLHTPPGPESEHHEEIRASSSAVSSSAVARELSFDGAGAGKDKAKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 2091
MSSSASTGRLQEEVESG+GDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVD EVREVLGALQGKSEGSPYAGKSKDVLEK LD+LMREKTEYKEKRLALLE QDDQLKAPGSDAADKPQQP QE+TGSGAVAEVAIASPSGSFAEEETRSVSETTLAWT+TVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAG+YTFSW GTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVG NTNL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX KASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKT TAEEE EDARAA XXXXXXXXX R XXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGL TPP PESEHHEE+RASSSAVSSSAVARELSFDG GAGKDKAKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN
Sbjct: 1 MSSSASTGRLQEEVESGIGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDGEVREVLGALQGKSEGSPYAGKSKDVLEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKPQQP-QEKTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTMTAEEEAEDARAAEQARAEIXXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLQTPPAPESEHHEEVRASSSAVSSSAVARELSFDGTGAGKDKAKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 672
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: D7FUG1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUG1_ECTSI) HSP 1 Score: 376 bits (965), Expect = 1.400e-104 Identity = 1150/1218 (94.42%), Postives = 1153/1218 (94.66%), Query Frame = 1 Query: 2119 MQSGPPPPSLFAARLVSALEHRAETAEQIAGERAKQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELEEANAKQVGELEHRIQGAESAVAAAAXXXXXXXELRAAEDELGGESARSLAENRARELSAVKAESARLVADLEQRVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAASTAAAVAAQQMAELEKRGQSVGSLAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXEATTARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEAAALAAQQRAELEKRGESAGFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANARAKKIEELEESTTNQVRELTRXXXXXXXXXXXXXXXXXXXEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAEAATAAVAAAXXXXXXXXXXXXXXXXAAERSKRLREVEASXXXXXXXXXXXXXXXXXXXXXRAXQILVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIESVTAXXXXXXXXXXXXXXXXXXXXXXXXXELEQRVERSEAEAAAAIQSGXXXXXXXXXXXXKLIEELEQRLESAQXXXXXXXXXXXXXXXXXXXXDFLAVERAKKIDHLNATTAKQIGNXXXXXXXXXXXXXXXXXXXEELTRRAEGAIAAAAAAQEQVDDVEASARQRELSASRALEASRRLFSTVKMEEEARLLKAEATASLELAQERIRQVEKRSERMLKEAMEEYAASLERVNKRAMRREEEXXXXXXXXXXXXXSAMQQRDLVASERYRRHTSQGGNSYKKGAPSGGGHLE 5772
MQSGPPPPSLFAARLVSALEHRAETAEQIAGERAKQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELEEANAKQVGELEHRIQGAESAVAAAAXXXXXXXELRAAEDELGGESARSLAENRARELSAVKAESARLVADLEQRVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAASTAAAVAAQQMA LEKRGQSVGSLAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXEATTARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEAAALAAQQRAELEKRGESAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAN RAKKIEELEESTT XXXXXXXXXXXXXXXXXXXEAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXSMKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAEAA AAVA A XXXXXXXXXXXXXXX AERSKRLREVEAS XXXXXXXXXXXXXXXXXXXRAXQILVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIESVTAXXXXXXXXXXXXXXXXXXXXXXXXXELEQRVERSEAEAAAAIQSGXXXXXXXXXXXXKLIEELEQRLESAQXXXXXXXXXXXXXXXXXXXXDFLAVERAKKIDHLN TTAKQIG+XXXXXXXXXXXXXXXX EELTRRAEGAI R L STV+MEEEARLLKAEATASL+LAQERIRQVEKRSERMLKEAMEEYAASLERVNKRAMRREEEXXXXXX SAMQQRDLVASERYRRHTSQGGNSYKKG PSGGGHLE
Sbjct: 1 MQSGPPPPSLFAARLVSALEHRAETAEQIAGERAKQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELEEANAKQVGELEHRIQGAESAVAAAAXXXXXXXELRAAEDELGGESARSLAENRARELSAVKAESARLVADLEQRVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAASTAAAVAAQQMAGLEKRGQSVGSLAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXEATTARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASEAAALAAQQRAELEKRGESAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRAKKIEELEESTTKXXXXXXXXXXXXXXXXXXXXXXXXXXEAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAEAAAAAVAVASXXXXXXXXXXXXXXXXAERSKRLREVEASAAXXXXXXXXXXXXXXXXXXXRAXQILVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIESVTAXXXXXXXXXXXXXXXXXXXXXXXXXELEQRVERSEAEAAAAIQSGXXXXXXXXXXXXKLIEELEQRLESAQXXXXXXXXXXXXXXXXXXXXDFLAVERAKKIDHLNVTTAKQIGDXXXXXXXXXXXXXXXXDMVEELTRRAEGAIXXXXXXXXXXXXXXX------XXXXXXXXXXRXLXSTVRMEEEARLLKAEATASLQLAQERIRQVEKRSERMLKEAMEEYAASLERVNKRAMRREEEXXXXXXAALALEKSAMQQRDLVASERYRRHTSQGGNSYKKGGPSGGGHLE 1212
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 327 bits (838), Expect = 1.360e-93 Identity = 255/656 (38.87%), Postives = 315/656 (48.02%), Query Frame = 1 Query: 130 VESGVGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGSNTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDHPDAEGPEXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVAS--APEAKTKTAEEEVEDARAAXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLHTPPGPESEHHEEIRASSSAVSSSAVARELSFDGAGAGKDKAKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 2091
V SG D+ S+AVS+ A DLDI LVD +VR LA + G + +YAG ++ T G ++L+++L+ LM KA++KEKKLA QLQ+ LP A + R +A P A L + + +P P +P+ T + +P EE+ ++V++TTL W +TVT GTYDAPK+TA LYA DA+LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAGTYTF++ G DG TVE RARFSFTFRR P SP+PWTIVEHHSSSMPT+P L+ RVG + D P F F PA V A +A T T E +D R AE K G+ ++ SSS + S R+ A D+TA VG GLGL+LG+E++GTRWVV GFR MPDGKPNPAEAAGIEVGDTLQ++GGVPLG+YK+GIE+FKK RGPVVLT+ RQN
Sbjct: 17 VASGAKDAESIAVSLGATDLDIELVDNEVRRALAAIH-GTKKETYAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRAAKYAERR-EAPAXXXXXXXXXXXXXXPAATGG------------------------FLSSLKNMIISPA------PAEPSPAAT---------VPTP-----EEDRQAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLK--RVGQDA-------MPKKIVKEITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTF-------RRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAFTEDVNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQN 598
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 323 bits (827), Expect = 2.400e-92 Identity = 261/707 (36.92%), Postives = 322/707 (45.54%), Query Frame = 1 Query: 136 SGVGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGSNTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDHPDAEGPEXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTKTAEEEVEDARAAXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLHTPPGPES-----EHHE-----------------EIRASSSAVSSSAVA----------------------------RELSFDGAGAGKD---KAKIH--DITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 2091
S VGD+AS++VS+ ID DI LVD+DVR++LA +Q G +YAG S+ T +GRAFL+++LDGLM KA+YKEK+LA LQLQ LP + D E S AGKS V A E E+ ++V++TTL W +TVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAGTYTF++ G DG+TVE RARFSFTFRR P SPQPWTIVEHHSSSMPT+P L+ RVG N +L PD + A+ + +W T A ++ A A + + + E++ D R K R S + PG EHH ++ AVS +VA E S D A + K H D+T ++G GLGL+LG+E+ G+RW VKGFR MPDG+PNPA A GIEVGDTLQKL GV LGSYKDG+E+FKKQ G VV+T+ RQ+
Sbjct: 19 SNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQ-GTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPEDGEY--------------------SAPAGKSPGV--------------------ATTE-------------------------------------------AEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK--RVGPNADLVKVTPKKVEIT----------------------------PDQKA----------------VAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVE--KRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSEGQTFKPDTHAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQD 581
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 314 bits (804), Expect = 3.830e-89 Identity = 257/722 (35.60%), Postives = 318/722 (44.04%), Query Frame = 1 Query: 136 SGVGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGSNTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDHPDAEGPEXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTKTAEEEVEDARAAXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLHTPPGPES-------EHHEEIRASSSAVSSSAVARELSFDGAG---------------------------------------------AGKDKAKIHD------------------ITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 2091
S VGD+ S+ VS+ A++ DI LVD DVR++L+CLQ +YAG S+ T +GRAFL+++LDGLM KA+YKEK+LA LQLQ+ LP + D E A G+P +P+ PA P+ EE+ +V+ TT+ W DTVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL++VEYTP VRVYGDFA QAGTYTF++ G DG+TVE RARFSFTFRR P SP PWTIVEHHSSSMP +P L+ RVG N L L P+ + + + +W T A S+ P A + + + E++ D R ET RA S PES EHH SSS S+ A + + D A A ++ ++ D +T TVG GLG++LGEEKEGTRW VKGFR MPDG PAE AG+EVGDTLQKL GV LGSYK+G+ +FKKQ G LTI RQ+
Sbjct: 19 SNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPNLEEDEEYAA-----------------GAP-----------------------------------------------EPEAPAP---------------PAAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLK--RVGPNAELVKVTPKE----------------------------LEVTPEMKA----------------GSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDD----ETVEKRARFSFTFRRDHPESPTPWTIVEHH-----SSSMPSAPAGLKRVENDPAAVMDEVVVEDAPAVVAAEEPXXXXXXXXAEAEPDVVXXXXXAAEEPASEEAEEVPDFSVVPDEEPFVPPTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQD 594
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 302 bits (773), Expect = 4.810e-79 Identity = 259/745 (34.77%), Postives = 308/745 (41.34%), Query Frame = 1 Query: 73 RCTGEAMSSSASTGRLQEEVESGVGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGSNTNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDHPDAEGPEXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKT-KTAEEEVEDARAAXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXA---ETKGGRASSSGLHTPPGPES-------EHHEEIRASS-----------SAVSSSAVARELSFDGAGAGKDKAKI------------------------------------------------H--DITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 2091
R T E ST + S VGD+ S+ VS+ A++ DI LVD DVR++L+CLQ +YAG S+ T +GRAFL+++LDGLM KA+YKEK+LA LQLQ+ LP + D E A ADK +V+ TT+ W DTVT GTYDAPK+TA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAGTYTF++ G DG TVE RARFSFTFRR P SP PWTIVEHHSSSMP +P L+ RVG N L L PD + + + +W T D P + A +A T EEV + ET RA S PES EHH S+ +AV V E A ++ + H D+T TVG GLGL+LGEEKEGTRW VKGFR MPDG PAE AG+EVGDTLQKL GV LGSYK+G+ +FKKQ G LT+ RQ+
Sbjct: 1141 RMTMERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPKLQEDEEYA------------------------------------------------------------------ADK-------------------------------AAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLK--RVGPNAELVKVTPKK----------------------------LEITPDMKA----------------VSETTIVWKNTVTLGTE--------DAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAAEEPEEPAVVADEPAAEAEPDVVXXXXXXXXXXXXXXXXEVPDFSVVPDEEPFVPTTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQD 1722
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 264 bits (674), Expect = 1.350e-73 Identity = 163/349 (46.70%), Postives = 194/349 (55.59%), Query Frame = 1 Query: 136 SGVGDSASVAVSVAAIDLDIALVDKDVREILACLQEGGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVG 1182
S VGD+AS++VS+ ID DI LVD+DVR++LA +Q G +YAG S+ T +GRAFL+++LDGLM KA+YKEK+LA LQLQ LP + D A + ++V++TTL W +TVT GTYDAPK+TA LYA DA+LWGT VSE VRDTPEQIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAGTYTF++ G DG+TVE RARFSFTFRR P SPQPWTIVEHHSSSMPT+P L+ RVG
Sbjct: 19 SNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQ-GTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGIPED--------------------------------------------------------------------------------------------------AAYSDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK--RVG 254
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 269 bits (687), Expect = 3.750e-73 Identity = 166/352 (47.16%), Postives = 203/352 (57.67%), Query Frame = 1 Query: 133 ESGVGD-SASVAVSVAAIDLDIALVDKDVREILACLQE-GGEGLSYAGNSSATPEGRAFLERELDGLMVVKARYKEKKLARLQLQRGLPVVAVDWEIARVDAEVREVLGALQGKSEGSPYAGKSKDVLEKKLDELMREKTEYKEKRLALLEQQDDQLKAPGSDAADKPQQPAQEQTGSGAVAEVAIASPSGSFAEEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVG 1182
+S V D +AS AVS+AAID D+ALVDKDVR +L LQ+ G EG +YAG S++TP+G+AFL+ ++DGLM KA+YKEK++ +Q + + P + + + + R APGS A P + A E E+ R+V+ETT+ W DTVT GTYDAPK+TA LYAPD LWGT VSE VRDTP+QIYAYFDYFARLPEL+VVEYTP VRVYGDFA QAGTYTFSW DG+ VE RARFSFTFRR P + +PWTIVEHHSSSMPT+P L+ VG
Sbjct: 9 QSSVSDEAASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQRXXXXXXXXXXXXXXXXXSVANSSSELPKATPPSLPQTPTN-------------DNSTHSTSRRGSFPLGPRPSPAPGSLRAPSPAKSATE--------------------AEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGT------------VSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLKAVGVG 315
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 214 bits (545), Expect = 5.480e-56 Identity = 108/154 (70.13%), Postives = 118/154 (76.62%), Query Frame = 1 Query: 721 RSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVG 1182
R+V+ETT+ W DTVT GTYDAPK+TA LYAPD LWGT VSE VRDTP+QIYAYFDYFARLPELKVVEYTP VRVYGDFA QAGTYTFSW DG+ VE RARFSFTFRR P + +PWTIVEHHSSSMPT+P L+ VG
Sbjct: 29 RAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGT------------VSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLKAVGVG 170
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 6.020e-49 Identity = 93/153 (60.78%), Postives = 111/153 (72.55%), Query Frame = 1 Query: 709 EEETRSVSETTLAWTDTVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGTYTFSWHGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 1167
E + + V +TT+ W + VT GT DAP++TA+LYA D +LWGT VSE VRDTPE+IY YFDYFARLP L++ E+TP +RVYGDFA +AGTYTF W G DG E RARFSFTFR + P SP WTIVEHHSSSMPTSPL+L+
Sbjct: 101 EGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGT------------VSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFR-SDPESPTSWTIVEHHSSSMPTSPLQLK 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig103.251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig103.251.1 >prot_E-siliculosus-1a_F_contig103.251.1 ID=prot_E-siliculosus-1a_F_contig103.251.1|Name=mRNA_E-siliculosus-1a_F_contig103.251.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1925bp SLTPSSYNHTARTHAPRLWRCPPARCTGEAMSSSASTGRLQEEVESGVGDback to top mRNA from alignment at E-siliculosus-1a_F_contig103:48945..63104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig103.251.1 ID=mRNA_E-siliculosus-1a_F_contig103.251.1|Name=mRNA_E-siliculosus-1a_F_contig103.251.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=14160bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig103:48945..63104- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig103:48945..63104- >mRNA_E-siliculosus-1a_F_contig103.251.1 ID=mRNA_E-siliculosus-1a_F_contig103.251.1|Name=mRNA_E-siliculosus-1a_F_contig103.251.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=11550bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig103:48945..63104- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |