prot_E-siliculosus-1a_F_contig1423.2496.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1423.2496.1
Unique Nameprot_E-siliculosus-1a_F_contig1423.2496.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length146
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2496.1 vs. uniprot
Match: D8LEU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU1_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 3.970e-93
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0 
Query:    1 MKWATLGALLLCKASAFHLPGVVRVGPPRRANSVVERREARHAAGRVLACTAEDEGNKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDSEAGRRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
            MKWATLGALLLCKASAFHLPGVVRVGP RRANSV+ERREARHAAGRVLACTA+DE NKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALD EAGRRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV
Sbjct:   66 MKWATLGALLLCKASAFHLPGVVRVGPSRRANSVLERREARHAAGRVLACTAKDEANKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDGEAGRRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 210
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BLAST of mRNA_E-siliculosus-1a_F_contig1423.2496.1 vs. uniprot
Match: A0A6H5KFW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW8_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 1.890e-88
Identity = 133/145 (91.72%), Postives = 138/145 (95.17%), Query Frame = 0 
Query:    1 MKWATLGALLLCKASAFHLPGVVRVGPPRRANSVVERREARHAAGRVLACTAEDEGNKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKPKALDSEAGRRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
            MKWATLGALLLCK SAFHLP V RVGP RRANSV++RREARHAAGRVLACTA+DEGNKGVADEDDPLDLNLDDFSEAEISDAELDKML AVEHGISRHK KAL S+AG+RGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV
Sbjct:    1 MKWATLGALLLCKVSAFHLPWVARVGPSRRANSVLDRREARHAAGRVLACTAKDEGNKGVADEDDPLDLNLDDFSEAEISDAELDKMLHAVEHGISRHKTKALGSKAGQRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV 145
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1423.2496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEU1_ECTSI3.970e-9396.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFW8_9PHAE1.890e-8891.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1423contigE-siliculosus-1a_F_contig1423:15652..16919 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1423.2496.1mRNA_E-siliculosus-1a_F_contig1423.2496.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1423 15602..17469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1423.2496.1 ID=prot_E-siliculosus-1a_F_contig1423.2496.1|Name=mRNA_E-siliculosus-1a_F_contig1423.2496.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=146bp
MKWATLGALLLCKASAFHLPGVVRVGPPRRANSVVERREARHAAGRVLAC
TAEDEGNKGVADEDDPLDLNLDDFSEAEISDAELDKMLQAVEHGISRHKP
KALDSEAGRRGEVDEAKMIMLLRQKMGEEDFYAVFDPRNPRIGDV*
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