Homology
BLAST of mRNA_E-siliculosus-1a_F_contig103.248.1 vs. uniprot
Match:
D7FUF2_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF2_ECTSI)
HSP 1 Score: 132 bits (333), Expect = 1.890e-28
Identity = 57/93 (61.29%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 326 CEACRKVFIPRIRPSFCCRTCLKLFHGACVGYSRHKRQSPPPAWICPRCPNGERGPTEYEIHPSLRGKGAVTQKLGNQQWCPICLDDDRAPGS 418
CEAC KVF + PSF CR C KL+H +CVGY+ RQSPPP WICP CP GERGP+ ++H S+ GKG V Q+ GN WCPICL DDR P S
Sbjct: 122 CEACGKVFTRDVHPSFACRACRKLYHRSCVGYANRARQSPPPDWICPHCPGGERGPSP-QVHLSVAGKGTVKQRKGNMPWCPICLRDDRLPNS 213
BLAST of mRNA_E-siliculosus-1a_F_contig103.248.1 vs. uniprot
Match:
D7FUG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUG6_ECTSI)
HSP 1 Score: 117 bits (292), Expect = 1.300e-26
Identity = 109/125 (87.20%), Postives = 114/125 (91.20%), Query Frame = 0
Query: 620 KKARVSESNPKLLPGSPSKTRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEAVVLAAAMLRGGTLDQQKEAEAFVANAIAPLGEEVPEVLILRLKGTAKEKEDGTW 744
KKARVSESNPK+LPGSP KTR K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEAVVLAAAMLRGGTLDQ KEAEA VAN IAPLG+EV ++LILRLKGTAKEK+DGTW
Sbjct: 40 KKARVSESNPKILPGSPPKTRVKDAVFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEAVVLAAAMLRGGTLDQHKEAEALVANEIAPLGKEVSDLLILRLKGTAKEKDDGTW 164
BLAST of mRNA_E-siliculosus-1a_F_contig103.248.1 vs. uniprot
Match:
D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)
HSP 1 Score: 123 bits (308), Expect = 7.360e-25
Identity = 64/136 (47.06%), Postives = 77/136 (56.62%), Query Frame = 0
Query: 378 ERGPTEYEIHPSLRGKG--AVTQKLGNQQWCPICLDDDRAPGSTKNHPGSKKCLDCGLRAHARC-------------TAGRETGADGRWPCDECQRRRDGVFP--GNNPVWLRLQAAKLDGGFALPPSRATETSAT 496
E GP + +H SLRGKG A +Q GNQ WCP CL D+R PG SK+C CGL HARC G ADG W CDEC+RR DGV G++PVWLRL+AA+LDGGF + + S+T
Sbjct: 525 EHGPDDTHLHESLRGKGGAAPSQPRGNQPWCPNCLGDNRLPGEKTMGSDSKRCPGCGLHTHARCRRKRPEASPGAAGATGGXXAADGSWACDECKRREDGVVVAGGDDPVWLRLKAARLDGGFKVSSLSPLQPSST 660
The following BLAST results are available for this feature:
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
100 200 300 400 500 600 700 800 Expect = 2.6E-4 / Score = 30.3 Expect = 0.044 / Score = 22.9 Expect = 3.5 / Score = 11.3 Expect = 4.3E-7 / Score = 29.7 Score = 8.582 Score = 9.374 Expect = 1.9E-8 / Score = 35.8 Expect = 1.1E-7 / Score = 33.7 Score = Score = Score = Score = Sequence SM00249 PF00628 PS50016 PS50016 G3DSA:3.30.40.10 G3DSA:3.30.40.10 PS01359 PS01359 SSF57903 SSF57903
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001965 Zinc finger, PHD-type SMART SM00249 PHD_3 coord: 41..91 IPR019787 Zinc finger, PHD-finger PFAM PF00628 PHD coord: 41..91 IPR019787 Zinc finger, PHD-finger PROSITE PS50016 ZF_PHD_2 coord: 323..377 IPR019787 Zinc finger, PHD-finger PROSITE PS50016 ZF_PHD_2 coord: 39..93 IPR013083 Zinc finger, RING/FYVE/PHD-type GENE3D 3.30.40.10 coord: 17..101 IPR013083 Zinc finger, RING/FYVE/PHD-type GENE3D 3.30.40.10 coord: 284..380 IPR019786 Zinc finger, PHD-type, conserved site PROSITE PS01359 ZF_PHD_1 coord: 326..374 IPR019786 Zinc finger, PHD-type, conserved site PROSITE PS01359 ZF_PHD_1 coord: 42..90 IPR011011 Zinc finger, FYVE/PHD-type SUPERFAMILY 57903 FYVE/PHD zinc finger coord: 323..375 IPR011011 Zinc finger, FYVE/PHD-type SUPERFAMILY 57903 FYVE/PHD zinc finger coord: 36..93
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig103.248.1 ID=prot_E-siliculosus-1a_F_contig103.248.1|Name=mRNA_E-siliculosus-1a_F_contig103.248.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=818bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: