prot_E-siliculosus-1a_F_contig1417.2465.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1417.2465.1
Unique Nameprot_E-siliculosus-1a_F_contig1417.2465.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length608
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2465.1 vs. uniprot
Match: A0A6H5KMH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH1_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 4.960e-119
Identity = 298/462 (64.50%), Postives = 309/462 (66.88%), Query Frame = 0
Query:  152 SASYGVVGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXNINNQSSGRRKMAPTSXXXXXXXXXXXXXXXXXXXXXXHPNGVDPAGRPNSVGSSVSSGMGEWGDSRHDAAGHWPVDHHHPGSVGVVGDGPRPRHAVNRDSSRNFPVGYPFHGEKGMRVGGGPAHMMAGEEELAHQLLPRQYQQXXXXXXXXXXXXXXXXXQQELDLRRLNQRRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHEAGTPPSPPPELYRLPQLGEAVPPDVRAPEPATPPSRPXXXXX-----TSVLDDTSSLQQQQHRDPSSSFRLQPPIAKSEPVEAPSPKRRAGQRGDEVDDD-KNTEVDGSDMAGGRNTPGSPAAXXXXXXXXXXXXXXXXFVLRRPRMLLPWSARKEGLPPPLLLTSKGWTEWEWQPVMMNIPA 607
            SASYGVVGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXX  NNQSSGRRKMAPTS                      HP GVD AGRPNSVGSSVSSGMGEWGDSRHDAAG WPVD HHPGS+GV GDGPR RH  NRDS+RNFP GYPFHGEK MRVGGGPAHMM                         XXXXXXXX QQ+LD  RLNQRR                                        G HE GT P  PPELYRLPQLG+AVP DV  PEPATP    XXXXX     TSV DDT SL+QQ H D  SS RL+PPIAKSEPVEAPSP+R AGQRGDEVDD      VDGS+MAGGR  PGSPA                 FVLRRPR+LLPW+ARKEGLPPPLLLT+KGWTEWEWQPV MNIPA
Sbjct:   93 SASYGVVGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQSSGRRKMAPTSGVGGEGGVGIGRAGRHQQQPQ-HPEGVDLAGRPNSVGSSVSSGMGEWGDSRHDAAGDWPVDQHHPGSIGVAGDGPRLRHTANRDSTRNFPAGYPFHGEKEMRVGGGPAHMMGXXXXXXXXXXXXXX----------XXXXXXXXLQQQLDRHRLNQRRQHQQQRWR--------------------------------GTHEWGTLPPAPPELYRLPQLGKAVPHDVGVPEPATPSXXXXXXXXXXXRNTSVSDDTPSLEQQ-HTDADSSSRLEPPIAKSEPVEAPSPERPAGQRGDEVDDKGAGAGVDGSEMAGGRKPPGSPAVGGTDAEEDAGAAA---FVLRRPRILLPWAARKEGLPPPLLLTNKGWTEWEWQPVTMNIPA 507          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2465.1 vs. uniprot
Match: D7FWU9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU9_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 8.220e-28
Identity = 91/140 (65.00%), Postives = 100/140 (71.43%), Query Frame = 0
Query:  474 SVLDDTSSLQQQQHRDPSSSFRLQPPIAKSEPVEAPSPKRRAGQRGDEVDDDKNTEVDGSDMAGGRNTPGSPAAXXXXXXXXXXXXXXXXFVLRRPRMLLPWSARKEG------LPPPLLLTSKGWTEWEWQPVMMNIPA 607
            SVLDDTSSLQQ+ H D  SS RL+PP+AKSEPVEAPSP+R AGQRGDEVDD+  T V GS++AGGR   GSPAA X XXXXXXXXXXXXX                        +P PLLLT+KGWTEWEWQPVMMNIPA
Sbjct:  124 SVLDDTSSLQQE-HTDADSSSRLRPPLAKSEPVEAPSPERHAGQRGDEVDDN-GTGVGGSEVAGGRKRLGSPAAGXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPXPLLLTNKGWTEWEWQPVMMNIPA 261          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2465.1 vs. uniprot
Match: A0A6H5KE32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE32_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 6.660e-17
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0
Query:   26 SCRYPGCPKRPTYGIEASRRRECCAEHALPGMVNIDLTR 64
            SCRYPGCPKRPTYGIEASRRRECCA HALPGMVNIDLTR
Sbjct:   31 SCRYPGCPKRPTYGIEASRRRECCAVHALPGMVNIDLTR 69          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2465.1 vs. uniprot
Match: D7FWU8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU8_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 2.990e-9
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
Query:   27 CRYPGCPKRPTYGIEASRRRECCAEHALPGMVNIDLTR 64
            C +PGC KRPTYG+EASR+RECC++HA P MVNIDLTR
Sbjct:   56 CLHPGCSKRPTYGVEASRKRECCSQHARPWMVNIDLTR 93          
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2465.1 vs. uniprot
Match: A0A6H5KFP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP4_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.530e-8
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:   27 CRYPGCPKRPTYGIEASRRRECCAEHALPGMVNIDLTR 64
            C Y GC KRPTYG+EASR+RECC++HA P MVNIDLTR
Sbjct:    7 CLYSGCSKRPTYGVEASRKRECCSQHARPWMVNIDLTR 44          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1417.2465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KMH1_9PHAE4.960e-11964.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU9_ECTSI8.220e-2865.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KE32_9PHAE6.660e-1797.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU8_ECTSI2.990e-976.32EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KFP4_9PHAE1.530e-876.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 394..423
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 187..428
NoneNo IPR availablePANTHERPTHR23355:SF54coord: 187..428

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1417contigE-siliculosus-1a_F_contig1417:19532..25470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1417.2465.1mRNA_E-siliculosus-1a_F_contig1417.2465.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1417 19532..25470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1417.2465.1 ID=prot_E-siliculosus-1a_F_contig1417.2465.1|Name=mRNA_E-siliculosus-1a_F_contig1417.2465.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=608bp
MQPAAAAASPGASGRAGAGAGTATASCRYPGCPKRPTYGIEASRRRECCA
EHALPGMVNIDLTRRVMCARLDCDTRATFGDPVTGRRTFCSKHAPPGTQN
VEKRKCAVEDCLTPPAYWHPGNRKRRCCAKHAEEGMVKLDKKLCPYKGCF
TSASYGVVGQKRKFCAAHAERGMVSIGGRRCAKEDCSKRANYGVAGTNKR
EFCAGHAAKGMVNINNQSSGRRKMAPTSGGGGGGGGGGISHTGGQQQQQQ
HPNGVDPAGRPNSVGSSVSSGMGEWGDSRHDAAGHWPVDHHHPGSVGVVG
DGPRPRHAVNRDSSRNFPVGYPFHGEKGMRVGGGPAHMMAGEEELAHQLL
PRQYQQQQEQQRERQQQRQQHHLQQELDLRRLNQRRHQHQHQLHQQLEHQ
HQLQQHQRQRQQQQRKHQQQQQQRWRGRHEAGTPPSPPPELYRLPQLGEA
VPPDVRAPEPATPPSRPSPPSKTSVLDDTSSLQQQQHRDPSSSFRLQPPI
AKSEPVEAPSPKRRAGQRGDEVDDDKNTEVDGSDMAGGRNTPGSPAAGGG
GGEDVEEDAGAAAFVLRRPRMLLPWSARKEGLPPPLLLTSKGWTEWEWQP
VMMNIPA*
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