mRNA_E-siliculosus-1a_F_contig1411.2438.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1411.2438.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1411.2438.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1411.2438.1 vs. uniprot
Match: A0A6H5KGP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP0_9PHAE)

HSP 1 Score: 696 bits (1796), Expect = 1.730e-248
Identity = 420/453 (92.72%), Postives = 428/453 (94.48%), Query Frame = 1

Query:    1 MLSKAAQVCVASLCLAATSXXXXXXXXXXXXXXXXXXXXXXXXXARGHQRGVSCARCNTSPVRPSPSSRVSATMAGDDPAGSNGRRRTTLSSALRNRLLSRGGDELSGREDDTAGADGEVSMRRRARGVMRRSFAGLATAVIIRASFNPQSASAVGLYRPRLDRGTATSRQLEKQEAKKQERIREEVQKEHEEKLGSAEEIYGEQAAPAAVSTAGEVVDQXXXXXVERAQATTGRPEIISRISDETVAKICALPTPEAQERALQMLLKEDYPKVWRKLTTQQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAAAAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQDLLG 1359
            MLSKAAQVCVASLCLAATSXXXXXXXXXXXXXXXXXXXXXXXX ARGHQ GVSCARCNTSPVRPSPS RVSATMAGDDPAGSNGRRR+TLSSALRNRLLSRGGDEL GREDD AGADGEVSMRRR RGVMRRSF GLATAVIIRASFNPQSASAVGLYRPRL RGTATSRQLEKQEAKKQERIRE+VQKEHEEKLGSAE+I  EQAA AAVSTAGE+VD XXXXX           EI SRISDETVAKICALPTPEAQERALQMLLKEDYPKVW KLTT+QRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAE+DEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAAAAGDEEEYDKKI+EALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGD+DLLG
Sbjct:    1 MLSKAAQVCVASLCLAATSXXXXXXXXXXXXXXXXXXXXXXXX-ARGHQHGVSCARCNTSPVRPSPSGRVSATMAGDDPAGSNGRRRSTLSSALRNRLLSRGGDELGGREDDAAGADGEVSMRRRVRGVMRRSFVGLATAVIIRASFNPQSASAVGLYRPRLGRGTATSRQLEKQEAKKQERIREQVQKEHEEKLGSAEDISDEQAAAAAVSTAGEMVDXXXXXXXXXXXXXXXXTEIRSRISDETVAKICALPTPEAQERALQMLLKEDYPKVWTKLTTKQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAEKDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAAAAGDEEEYDKKIREALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDEDLLG 452

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BLAST of mRNA_E-siliculosus-1a_F_contig1411.2438.1 vs. uniprot
Match: D8LDI5_ECTSI (MscS Mechanosensitive ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI5_ECTSI)

HSP 1 Score: 489 bits (1260), Expect = 1.190e-169
Identity = 272/288 (94.44%), Postives = 276/288 (95.83%), Query Frame = 1

Query:  511 QLEKQEAKKQERIREEVQKEHEEKLGSAEEIYGEQAAPAAVSTAGEVVDQXXXXXVERAQATTGRPEIISRISDETVAKICALPTPEAQERALQMLLKEDYPKVWRKLTTQQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAAAAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQDLLGGDDNA 1374
            QLE+QEAKKQERIRE+VQKEHEEKLGSAEEIYGEQAAPAAVSTAGEVVD XXXXX       TGR EIISRISDETVAKICALPTPEAQERALQMLLKEDYP VWRKLTTQQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAE+DEFM+VDGEAEFDVDIMKELRDMKEKMAGPGD YAKDTRAYNPDFAAAAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQDLLGGD NA
Sbjct:    3 QLEEQEAKKQERIREQVQKEHEEKLGSAEEIYGEQAAPAAVSTAGEVVDXXXXXXXXXXXXXTGRTEIISRISDETVAKICALPTPEAQERALQMLLKEDYPTVWRKLTTQQRAAITKLRVENKTFKAVSIGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFDAEKDEFMDVDGEAEFDVDIMKELRDMKEKMAGPGDSYAKDTRAYNPDFAAAAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQDLLGGDGNA 290

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BLAST of mRNA_E-siliculosus-1a_F_contig1411.2438.1 vs. uniprot
Match: A0A835YR84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR84_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.540e-11
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1

Query:  991 SLRSMSNQRKRVKVESAKFDAERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAA 1200
            S   M+ QRKR++ E+ KF    +E M V+GE  ++ D+M+ELR MKE+  GPGDKYAK+TR YNP+FAA
Sbjct:   93 SATDMNAQRKRIREENTKFQQNAEEHM-VEGEVAYNEDLMRELRRMKEENVGPGDKYAKETRRYNPEFAA 161

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1411.2438.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1411.2438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KGP0_9PHAE	1.730e-248	92.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LDI5_ECTSI	1.190e-169	94.44	MscS Mechanosensitive ion channel n=1 Tax=Ectocarp...	[more]
A0A835YR84_9STRA	2.540e-11	54.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1411	contig	E-siliculosus-1a_F_contig1411:21225..32421 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	0
Cds size	1425
Model size	1425
Exons	8
Ec32 ortholog	Ec-15_000470.1
Ec32 ortholog description	MscS Mechanosensitive ion channel
Hectar predicted targeting category	chloroplast

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1411.2438.1	prot_E-siliculosus-1a_F_contig1411.2438.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1411 21225..32421 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1411:21225..32421+
coding sequence from alignment at E-siliculosus-1a_F_contig1411:21225..32421+

protein sequence of mRNA_E-siliculosus-1a_F_contig1411.2438.1

>prot_E-siliculosus-1a_F_contig1411.2438.1 ID=prot_E-siliculosus-1a_F_contig1411.2438.1|Name=mRNA_E-siliculosus-1a_F_contig1411.2438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=475bp
MLSKAAQVCVASLCLAATSTTTTTEAFVVPSAALKGSTAAAAAAARGHQR
GVSCARCNTSPVRPSPSSRVSATMAGDDPAGSNGRRRTTLSSALRNRLLS
RGGDELSGREDDTAGADGEVSMRRRARGVMRRSFAGLATAVIIRASFNPQ
SASAVGLYRPRLDRGTATSRQLEKQEAKKQERIREEVQKEHEEKLGSAEE
IYGEQAAPAAVSTAGEVVDQAGEATVERAQATTGRPEIISRISDETVAKI
CALPTPEAQERALQMLLKEDYPKVWRKLTTQQRAAITKLRVENKTFKAVS
IGDMRKRGKRDLSPLGLTFSAFLFVTGMRASLRSMSNQRKRVKVESAKFD
AERDEFMNVDGEAEFDVDIMKELRDMKEKMAGPGDKYAKDTRAYNPDFAA
AAGDEEEYDKKIKEALEGTGKAGKSNKGETRKVFTNEPTTGPTAASGDQD
LLGGDDNAGADTNGAAASAAAEVRR

mRNA from alignment at E-siliculosus-1a_F_contig1411:21225..32421+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1411.2438.1 ID=mRNA_E-siliculosus-1a_F_contig1411.2438.1|Name=mRNA_E-siliculosus-1a_F_contig1411.2438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11197bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1411:21225..32421+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTGTCCAAAGCCGCTCAGGTATGCGTGGCTTCTCTGTGCCTCGCTGC
TACCTCAACGACCACGACAACCGAAGCTTTCGTCGTTCCCTCGGCTGCCC
TGAAGGGCTCGACGGCGGCAGCAGCAGCAGCAGCCAGGGGGCACCAGCGT
GGGGTATCCTGTGCGCGGTGCAACACTAGCCCGGTGCGCCCCTCTCCCAG
CAGCAGGGTGTCAGCTACCATGGCGGGGGACGACCCCGCCGGCAGCAACG
GCCGCCGCAGGACAACGCTCAGCAGCGCGTTGCGCAACAGGCTTCTGTCT
AGGGGCGGGGACGAGCTGAGTGGACGAGAAGACGATACGGCCGGTGCAGA
TGGCGAGGTATCGATGAGGCGGCGGGCGCGGGGCGTGATGCGCAGGAGCT
TCGCGGGGTTAGCTACGGCTGTGATCATCCGAGCTTCCTTCAACCCGCAG
TCCGCTTCGGCGGTAGGGCTGTACAGGCCCAGGCTGGATAGGGGAACGGC
AACGAGCCGCCAGGTAACCGGTCAAGCGCGCTGTCGAGCACGGAGATGTA
GAGCAATCGGATTGCGGGATACATCCGTATGCAGCAACCCCTCCAATGTT
ACATGCGTCCTTGAGATGATGGGATAGTCTGTTGCACACATCACCGCCAT
CATACAACCGTCCGTGTGTTGGTCGCACTAAACTATGTATTGTTTGTGGT
GCGCAACGCGAAGCAAGAGCAACGTTCGCACCAAGCCGCGTACTGCTTTT
GCACTGCACCGACCACAGCAGTTGCGTGCAGCAGCTATCGGAGTGTTGGT
GCTTGCATTGACCGCTGCTTTCAAGAGTTTTTTTCTACAGCAGTACCGCA
GAGCCGCCGTCGGTGCTTCCGTACCCCCTCCGTTGTTCTGCCTACCACAC
AACATCGTAATACAGCAGTGTAGTTTCAGGTCGTCTTTGCCTACATTGCT
TCAAGTGTTTTGTGCACTCGTCCGTGTTCTTGAAAACTGAGCGCAAGCGC
CGCAGGGGCAAAGGCGGCGATTCCTCCTGTGTTACAATACATCCGCATTC
CCGGTTGGTGTTGGTGCGTTATACAATTATTAAAATATAAAAAAATCGTT
GTCGCACTTGGCTGTCTTGTTGACAAAGAAGAGACCAACAAACCCGTTCA
ACCACATTAGGAACTGGGGCGATTCACGTTCCACAGGTCGCAGGTCGCAG
CTCTTTGGCTACCCCCCCCCTCGTACCAGCTCGCTTGATCAGTGTGGCCC
AGAACGTGGACACACGCCCCTCTTTTCTTACCACATGTCTTCCACATACT
TACAATACATACCCTGCTACTACGAGAGGTCCCTGTATAGTGCCGGTGTG
TGCCAAGAAAATTCTCTGGCACTATTAGGAAACATAAATACAAACACAGA
GAGACTACCCATTCGAGATATAACCACAGTCGAACGGGATGTGTGGGAGT
CTTTTCGGTGAGTGAAGGAAAACCGGCTGGGTACTGGGCTTGTTTCGAGT
CTATTTAAGCCTATACACTGAAAATTGTTTATCAGTGATGCCTGGTACGT
GCTTATCACAAATACCGGACCGGCGCTGCTGTACACCGGGCACTGGCACT
GTTCAACCGGCACTAGACAGGGACCTCAACTGTACGTGGTAGTCTACATG
CCTGGGGGATACACGTGTCTCCTGTCATGTGGTATGCATGCAACTGCTGT
ACATTTTCTGTTGATGGATGGGGGTGCACTCATGTAAACACATGCCGTGG
TTGGGTAGACCATAGACCTCGCATCCCTGCAATGCCCGGAAGGATCGATG
TGCGGGGTTTTAGCCGGCCCAGGCTACTTTTCACAAGGATGAACCAGGAG
CTGGTCGTCATCCTTACGCTTGCTGCGCCAAACCGGATATTGCATGGGCA
TCCCGGCTACCCCAAACTTTCCACACCCAGCTAGTACATCAATGGGGGGA
TACATATCTAATGTACCTTGCAATCATGTTCGGCTGGGGCGTTTTTTTTT
GTTTCGCGGGCTTGACCGTGGCAGGGGCAAGGGTTGTCCTAGCACCCGCC
CTTAAGGGTGGCTGCGTTGGAAGGATTTGTGTCGGGCACTGAGCGAACGA
CAACAACAGTTGATATCGAGTAGCGGTAGAGTACCAGTGAGGCCATCCCG
CTTGTTCACAATGGGCACTGCATCTGGTACTGCTGTATCTGTCTGTCTAC
TGTCTACTAAATCTGCCAGAGGAGCGGAGACCCAAGGAGATGATAGCGGT
GTTGACTGGCTGATGCGCCAACTTTACGGTTTCCTAGATGGAAGAGGCGT
GGTGTCCTACCGTTAGTTCACAACGGCGCCGACAATCGTATCGCGGGTCT
CCGCAACATTGTCGGTCTGTGCTTCCCGTGGTCGGGGCACATCAACGTAC
AGCACCACGCGATTGGACTGTCTTCCAGATGAGGCCCCCCAAGCACAACC
ACATACACAGCAGTGTTTATTATTATTTCTCCGTCGGCCTCACACACGCT
TGAGACAGCGACTCTTCCAGGGCAAGCAGCTCAACGCTTCATGCAACGTA
CTCAACAGTCACCCTGAAAAACAGCAGTGTCACAGCAGTACTAATACCTC
TGTGTGTATCTCTTGACTGCTGCCCTCACCCCAACAAACGACGCTATGAT
ACAGCTGGAGAAGCAAGAGGCGAAGAAGCAGGAGCGGATACGCGAGGAGG
TTCAGAAGGAGCATGAGGAAAAGCTCGGCTCTGCTGAGGAGATCTACGGA
GAACAGGCAGCGCCGGCGGCGGTTTCGACCGCAGGAGAAGTCGTAGATCA
GGTATCTACTGCGACGATAGTTTTCTTGAGTTATTTTTTTGAGCCGCGCC
TCGCGAAGCGCGACCTTCATCCCAGGAGGAGAAAGAAAGACTCTATGTAT
CGTCCTGTTCCAACACGATGCAGGGGCCCCAAGTTGAGTTCCCGGGAAGC
CTACATATATAATCCCTACTTCCGACCCAACCGAGACCTATAGGGCACCG
TTTGACGATCTGTTGCCTTCCGAGGTTAATAGGGCACTCTTCTCCACACC
GGTTTGGTCGTACCGCGACAATAGATGGCGGTGCTACACAGGCACTTGTG
CCCAAAATTTAATGGAGATACCTCACCCTAACCCCGGGTTTTCGGGAGGG
CAAGGGGGGACAGAAGAGCGGAGATCTCCCACACAGACACACGCGCAGTT
CTGGTTCAAAACAGGAGAAACAAAGGAAGCACTCAGCTACACACGCAACG
CCGCTGGGAGGAGCAGGGCAGCACTGGGGGGGGAAGGGAATCATCCACGC
AGCTCGTGGCGGGTGCCTCTGTCATGCTGTTGCTTCAGTGGGTGGGAAGG
GATAATGGGTGAACCAAACCGGTGTCAGGGGCATGAGAAAGACAACCCAG
TTCCAGCAGACGCGGTGTTTTTGTTTCAGACTCTGCCTGACTCTCGCGCT
CACAATTTCTGAGCGCCCTACAGCCTCCCGGTATGTATCAATCACCCCAC
AAGACGGAGCATGGCACAGCTCGTGGCGGATACCTTTTTTATTTTTGTTG
CTTCGGTGGAAAGGGAGGGGTCACCTGGAAACAAACCTGTTCCATGGCAA
AATGCACAATGGCTTCTTTTTTTCGTTGACGTTTTTTTTTTTCTGTTTTG
CTCGCATGCATCCATGTGTTGTCGTGGATCCTATGGCTCCGTGGTCTCTA
TCAGGCGCCACACAAAACGTTGCATACGCACAGATCGCGGGGAATAGCTT
TACAGCTGCTCCTGCTTCACCCAGTCCAGAACAACCACCTAAAAACACAA
ATCGGCGGAGGAACTTACATTCTGCAAACCGTATGCCTTGGTCGATGCAC
ACGAATCTCAAACGGCCGTCGTATTTCATTTTTGTCGATGACTCGGGTTG
AAAATGATCGGCTGCACCGCCGCCGGCAAAAGCATCGCAGATAGACTGCT
GCAGGTGTTGAGTCCCTGCCGCTCATTACCCCTCCCTATGTAACTAGTAG
TTCGACGAGTCTGATACCTCAACGACGGACACACTCGCAAGCAACGGCGA
CGGTTGTAACACTCGGAGATGGGGTGTACCATGGCAGCTGTGCTCTCCTC
GCTGTTGCGTTTGGGCCGACTTCGCGAGAAATTTAAGTTTTCGAGGAAAT
ATAACAGGTGGGGGGTGGGCACGCAGAACCAACAACCTAGCCCAGCTTCC
CCCGATTGTATGCCTTGTCCAACATGTTAACTTAGTAGAGAAACCCTGCC
AAGCTATCGTTGATTTTTGATGCAAAGGCACGGTGAAAGGTTCGTCGGTT
TTGATGCCAAGTATCCAACCTGGTTGTCAAGAAAACCCGTGTCTCGGTTG
CGTTCCCGATGGTGTGCCGCTTGTACTGCTGTCTCTACTGATGTGTCGAT
CGGCGTGGAGGGGGGAAGTCATCCACGCTTCGTGCTGGGAGGGATGTGTT
TGTTGTTTGTGCCAAAGGGGGTGTTTGGCTTGAAACCATCGTTACCTCGT
TTACCGCAGCATTGTACGTCATTGCGATTGAAGATTCATGAATCATTTTT
TTACTTAGTTTTTTTTCGATCTGTATTCTAGGTTGGTGTCCCTCCAACCC
CGTCGTGGAGTTGATTGGAGACACTCATGCTTGGAAAAATCACGGACGGA
CCTTTTAGGAAAAATAAACAGAAACACAGAAAGACTACCCATTCGAGAAA
TAACCACAGCAGTCGAACGGGATGTGGTGGAGTCTTTTCGGTGAGTGAAG
GAAAACCGGCTGGGTACTGGACTTATTTCGAACCTCTCTAAGTCTATTCA
CTGATGATTTATACCAGTGATATCAGCTGGTGCTAAGTACGAATCCTTTT
GGACCTTTTGCTGGGGACAAAGTATTCCACAGTCGAGGTCCCGGTTTAGC
GGTTCCTTCCGTGTTTAGCGGAATGCCCTGAATACCATTTCCAAAGTCTA
GTGGCACGGCTGCAACTCGGTAGTCAAAACTACTACATAACTGTCAATCA
ATCCGGTTTAGCGGCGATGCCCTCAACAGGGGCTTTAACATTTTGTTAAA
CTATAGTTACATTATAGTTACACTAAATTACACTATAGACCGCTAAATCG
GGTCAACGACTGCATGTCCCCAAAACGGCAGCAAGTAAGTCATTGTGACG
TTTTGTTTTCGCTTCGGACACGGCTTTTTTTTTTTTTTTCGTTGTTGCAG
GCAGGAGAAGCCACGGTAGAACGGGCGCAGGCGACGACGGGGAGGCCAGA
AATCATATCGCGCATCAGCGATGAAACGGTGGCTAAGATTTGCGCGCTTC
CGACCCCTGAGGCTCAGGAACGAGCCCTGCAGATGCTCCTCAAGGAGGAC
TATCCAAAGGTAGGTTTGCACGCACGTTGAGAGGCGTTTTTTTTTATATT
GTCCTCTTGTCCTCGTGCGTGTTGGATTTTTTCTTTCTCGCGTTTCGTCG
AGAGCAGGATGATTGTTTCACGATACGTGTTCTTTTTTTTGTGTCGATTT
CGTTTCAGCTTATCGTCAATATTTTTATATTATATTTTCCAATTTGGACG
GGATTTTACTGGCGCGTGATGTTCGAACACCCATACCGTAAGTACTTCTC
AACTGCCGCCTACCCTTGGGTCTGCCCACGTGATTAACCATGGCCGGTGA
TTCTGTCATGATATTTGTCATCATAAGACTGTACAGTAGAGGTCCCTGTC
TAGTGCGGGTTGAATAGTGTCATCAGGAGACTGTACAGTAGAGGTCCCTG
TCTAGTGCGGGTTGAATAGTGCCATCAGGAGACTATACAGTAGAGGTCCC
TGTCTAGTGCCGGTATAGTGTTTTCGGCGGAAACACACTGAATTTCCAAG
TCATTCTCAACACTGGAACAGTGTCGGGTCCGGTAAGTGCCGGTCTACTC
TGGGCACGTATCGGCACTGAACAGGGACCTTGACTGTATATGGTGCATAT
TTGTAAGATTTTTCTTTTAGTTTTGTTGAGGTTCGCTGGGCTGTTCGAGT
AAAAAACACGTCAGCTGTGTGGGCTGTTGAGCTTGGGAAATGTCACGCGA
CAAGCTGGCAGCCAGCTGTTTTGCCTGCTTCTGTGTTCATGTTGCATCGC
AGCGCTTGATGATACTGCTGTGCTCACATGAGCCCACTATTGTATGCATA
CTTCTTTTTTTTGTGTGTGAAAGGTCTGGAGGAAGTTAACGACGCAGCAG
CGCGCCGCCATCACCAAGCTGAGGGTCGAGAACAAGACGTTCAAGGCCGT
ATCTATCGGGGACATGAGGAAGAGAGGAAAACGGTGAGATACTTGCAGAT
TCTTTTGTGTTTTTTTTTTTTTGGCTGTGCGGCGAGGCCGAACCGCAAAA
GAAAATAAGGTTGATTTGAAGACCTTTTTGTTGGTTGATATGGCGACTTT
TCTGAGTACAGTCGTGGTCCCGATATACCGCGGAATAGAGTGACAGGCAC
AAATCACCGCGGTATACCGGTACCACCGCACTATTGACGATATACCGCGG
AATAGTGAGGCAAAAATCACCGCGGTATATTGGGACCACCGCACTCTGAG
TGTTGGGGAATACAGGTTTTAGTATGTAGGCAAATCCCGTGTGAAGGCGG
TTTTTACCGCGTTGTATCGGTACCACACGACTCGGGACGGCGGTACGGTA
TATCGGTACGGTACGTCGGGACCACCACTGTAAGAGGCAGGAGGCCGAAG
CAGAGGCAAGTAGGTTGGCTTCGAAAGCCTTTGTTTCTTGACGTTGACTG
CCAACCGACCAACTTGCCACACATCTCCCATGAATCCACCGATGGATGCA
TGCCCGCGCCAGTCAGGGGGTACTCGGCAGAGTACTGATGTACGGGCCGC
CCGGGGGGGGGGAGGGGGCTTTCCGTGCATGTTGTGTGCATGATGGGCAC
TACGGGAGAGGATCTTCTGGACTCGCCCATGTCTCCGACTCAGAAAGCTC
GAAAGATACAGCAGTGTACGTTGCAACAGCCAACGCCAGCAGTCGTGCGA
TAAAAAGGGTTTATTCGCGTCAACCTGGTGGAGTTTTTTTTTCGTGTGTG
TGCTCCGTTTTCGGCTCACAGCAGCAACAGTAGCAGAGAGAGGGTGTTGG
CTTTAGTTTTTTTCGTTGCGATTGCTTCGAATTGTTCACAAATATTCCGC
TTCATTCATCGCAGTACATACCCCCCCCCCGCGCGCGCTTACATGAAAAG
TTTTGTTGATTGCACTACCCCTCCCGCCTGTGTCCGTTCATTTTCGGTTA
CGAAAGCGACTTGTCCCCGCTTGGTCTGACCTTCTCGGCCTTCCTGTTCG
TCACGGGCATGCGGGCGAGCCTCAGGAGCATGTCAAACCAAAGGAAGAGG
GTGAGTTGGGAGTTGGGCCTATGTGCTGCCGAGGGCACTTATTCGAAGAG
CACGACAAGTCCATCTCTTGCACAAATTAAGAGTCTGATTAGCGATCTCA
TAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGGTTGTTCTGTTCATAC
CGCAAGAAGTGCACGACAAATCCATCTCTTGCACAGCTTAAGAGTCTGAT
TAGCGATCTCATAGTGATGTTGTTGTCGTGGTTGTTCTGTTAACATGAAA
AATAAACGTCCCGATCTCTCTAGTCAGTACCTTGATCTGTCCTTTGTACT
GTGACGAACTTGTGTTTCTACCGTTTCCCGAGCAGCATACAGCGATATCT
CGATATAACCCTGTGGGTAACGGGCTCGACAAGCTATCGTTTCTTATTTC
TTCACTTTTTGTCGGTGTCATCATCATCTCATCTTCGCTGGGCACCCGTA
CAGGACTTCCTTGAAACCATTGTGTAAGCCTAGGCTACTTAGCCGGGTTC
ACGATGAGGAGTTCCCGTGAGGGAAGGCGGTTTTTCTCCAAGGGACCATC
CCAATTTGTCGGCAATGCTGTACGGTGTTCGGAAGTACAGCAGTCGTCCC
TCCCTTAAGGACACGTACGGTTTTTCGTTAAAACAGGCGTCCTCTCAAGA
AGGGCAAGTGTCCGTGAGGTTTATCCCCCCCCCCCCCCCCCCCCCCCCCC
CCTCCTGGGGGGGGCGGGCAGGAAAAGAGGGGGGAGGGGGGGGGGGAGGT
GGGGGAGGGAGGGGAGGGGAGAGGAGNNNNNNNNNNAGGTTTTTCTTTAA
AACAGGCGCCCCCCCAAAAAGGGCAAGGGTCCGTGAGGTTTTCCCCCCCC
CCCCCCCCCGTATTGTGTACATGAGTGAGCTGGGAAAAATAGAAGGGAGG
TACAGGGAGATGTTGGAGGCATGGAATAGCGAGGAAAAGACGATAGCCGT
ACTGGGGTATAGGAAGTGGGTTGAAAAGGCGGGAAGTGATATCGATAGGA
TAGATAGACTAGGGAAGACATTTTTGAGCCATCTTTGGCACAGTAGGAAG
GAACGATTGGACATCGGTGATCGGTCCTGTGGGAACATTGCTCCGTCCTC
TCGAGGACGCGTGGTCACTGGTCTGACCGCTAAGGCATGAAAAACATTTA
GAGTACGCCCCCCGGTTATGGTGTACATTCTGCGGGGCACCGTGCCTGTG
AACAAAAGGTACCCCCCGGTTATGGTATACATTCTGCGGGGCACCAGGCC
TGTGAAAAACAGTTTTCTCATTGGTGGTGTCCTTACGAGAGGGATGACTG
TACTGTACTGTACTGTACTTGCTGCGCGTTGTCCGACCGTTTTCTGCTGG
ACTTGGCTTGTCCCTTTGGTCCTTCCGTTGCTCTTGGGGCCAATGGTCTA
GGTTAGACGGCCTGCTCATTTCGTTCGGCTTCTCTTACGTTGGTCAGACC
TTCCTACAGGTGTTATTGCTTGGACTGGCCCACTCTCTAGAAGATTGACC
ATTTTGTTTCCGGCGATTTCTCTCGTTCGGTTTGCCATCATTTGTTATTT
TCCTATTTACAGTGATTTAGGCTGTGCATTAGTCTAGACGGACGTCTGTT
TCACGTGTTGGAGAGGGCGGAAGGGAGGCGCTGCGTAAAGACCAGAACCA
TGTTTCCGTTGAAAACGAAATTAATGAAAAACAAATAAACCCCGTCCAGA
AATTATTCCGGAAAGGTGTGCAACACCGACGTCTAGAACCGAAAAACACC
ACCACCACAGCAATACCACAGCAATCATCCTACGCTGTTTTGATCCAAGT
TTTGTGCTTTGTCCTTGATATGGTTGCGAATGCGGTATGGCTATGGGTAA
GAGTGAATATCCAAGAGGAAATCGGATCTAAGAGGGAGTGGTGATTGTTT
GTCGAATGTCCCAACCCTCTCTTCAAGCCGCAGCGGCGCCTCTGATATAC
GAGGGTGGTGTTGTGACAAAGGCCCTCGACCCTCTTACATCGGAGCCCCT
CTTTTTCCAGAATAAGAGCGCACCCAACTTATACTTACAGCGGGTCGAGT
CCGTGACAACCGATTTCGACCCTCTTATAAGGCACCCTCTTAAATCGGAG
CCCCCTCTCATACCAGAATAGAAGGTACCCAACTATACTTAAAAGCGGGT
CGAGTCTGTGACAACCGATTTCGACCGTCTTATGTTGGAGCCCCCTCTTA
TAAGGTACCCTCTGTCTTATATCGGAGCCATGGCTGTACTGCATTGTACG
CATAACTGTTCTTCAGGTGAAAGTGGAGTCGGCAAAGTTTGATGCCGAAA
GGGACGAATTCATGAACGTCGACGGAGAGGCTGAGTTTGACGTCGACATC
ATGAAGGAACTCAGGTGCGTCTCGTTACATCTTCGTCGTAGATCTCTTGT
CGTAGATCTCTTGACGTCGACGGGGAGGCTGAGTTTGACGTCGACATCAT
GAAGGAACTCAGGTGCGTCTCGTTACACCTTCGTCGTAGATCTCTAATCG
TAGATCTCTTGTCGTAGATCTCTGTTGTAGATTTCTATGAAGGAAACTCA
GGTGCGTTTCGTCGATCCGGTCAACCTTCTTTGTTGTAGATTTCTATGCT
GGGTTGTTGTGCGTATCATGTATCAGGGACATATCAGTGCGAAGTATTCA
TGTATCAGGGACATTAGTACCAAAGTAGAAGTACGATTTTCTTGGTAGAT
CTCTATCTCGTGTAGCGTTGTTTTGCGGATGTGTCCATGTACTAGAGATC
CGAAGTGTACATGTGTTCATCGTAGATATCTGTCGTAGATCTCTATCGTA
GACCTCTGTGATACGCGGATATTCTACGTGTCAGAGAATACGAAAAAATG
ATCTTAATTCCTCGTTCTGTATCGTTAATCTCTATGATAGGGTTGTATTG
CGGATAAACCAACGAATCAGAGAATGCCCGGCCGATCCTTCGTACCTGGC
ATTGATTGTGTTTGAAAATGTCATGGATGTTTTTTTTTTTACTTACAAAG
CAAATGAACATGTCATCTCTTCCACAGATTAGAGTACGTGGCATGTTAGC
AATGCATTTATTGTATTCTACGACGGTGACCAACTTATTTTGAAGTTTTT
CTCTGTCGTACCCCCCTTTTTTTTTACGGTTACACAGGGACATGAAGGAG
AAGATGGCCGGGCCGGGAGATAAATACGCCAAGGACACCCGGGCCTACAA
CCCCGACTTTGCCGCGGCTGCGGGCGACGAGGAAGAGTACGACAAGAAGA
TCAAGGAGGTGAGTACGACAAGAAGATCCGAAGAGGTACACCGCTTCGTT
TTGGAAACCAACTAGAAGTGTTGTATCCCCTTTTTGGGGGGTTGAGGCGG
CGCTCTCACAGTAGAGTACGATAAGAAGATGAGAGAGGTGCACCGCTTCG
ATTTCGAAACCTGCTGCTACTGCTGTACCCTTTGTTGGACTTGGCTCGGT
GCCCATAAGAGTGCGACAAGAAGATCAAAGAGGTACATATGCGATCCCGA
TTCGTTTTCGAAACCAACTGTAACCTTTTTTTTTTACTTCAGTCAGCTCT
CTCACAGTATAGAGTACGACAAGCAGGTCAAAGAGGTACACCGCTACGTT
TTCGAAATCCTTTTTTTTGACTCGCGTCGGCGCCCTTATTACTTATTGTG
ACTTGTTTTCCCAGGCTTTGGAGGGCACCGGCAAGGCCGGAAAGTCGAAC
AAAGGCGAGACAAGGAAAGTGTTCACCAACGAACCTACCACCGGTCCGAC
CGCGGCTTCCGGGGACCAAGACCTGCTGGGTGGCGATGACAATGCCGGGG
CCGACACGAACGGGGCTGCCGCAAGCGCGGCTGCGGAGGTACGTAGG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1411:21225..32421+

>mRNA_E-siliculosus-1a_F_contig1411.2438.1 ID=mRNA_E-siliculosus-1a_F_contig1411.2438.1|Name=mRNA_E-siliculosus-1a_F_contig1411.2438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2850bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1411:21225..32421+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTGTCCAAAGCCGCTCAGGTATGCGTGGCTTCTCTGTGCCTCGCTGC
TACCTCAACGACCACGACAACCGAAGCTTTCGTCGTTCCCTCGGCTGCCC
TGAAGGGCTCGACGGCGGCAGCAGCAGCAGCAGCCAGGGGGCACCAGCGT
GGGGTATCCTGTGCGCGGTGCAACACTAGCCCGGTGCGCCCCTCTCCCAG
CAGCAGGGTGTCAGCTACCATGGCGGGGGACGACCCCGCCGGCAGCAACG
GCCGCCGCAGGACAACGCTCAGCAGCGCGTTGCGCAACAGGCTTCTGTCT
AGGGGCGGGGACGAGCTGAGTGGACGAGAAGACGATACGGCCGGTGCAGA
TGGCGAGGTATCGATGAGGCGGCGGGCGCGGGGCGTGATGCGCAGGAGCT
TCGCGGGGTTAGCTACGGCTGTGATCATCCGAGCTTCCTTCAACCCGCAG
TCCGCTTCGGCGGTAGGGCTGTACAGGCCCAGGCTGGATAGGGGAACGGC
AACGAGCCGCCAGATGTTGTCCAAAGCCGCTCAGGTATGCGTGGCTTCTC
TGTGCCTCGCTGCTACCTCAACGACCACGACAACCGAAGCTTTCGTCGTT
CCCTCGGCTGCCCTGAAGGGCTCGACGGCGGCAGCAGCAGCAGCAGCCAG
GGGGCACCAGCGTGGGGTATCCTGTGCGCGGTGCAACACTAGCCCGGTGC
GCCCCTCTCCCAGCAGCAGGGTGTCAGCTACCATGGCGGGGGACGACCCC
GCCGGCAGCAACGGCCGCCGCAGGACAACGCTCAGCAGCGCGTTGCGCAA
CAGGCTTCTGTCTAGGGGCGGGGACGAGCTGAGTGGACGAGAAGACGATA
CGGCCGGTGCAGATGGCGAGGTATCGATGAGGCGGCGGGCGCGGGGCGTG
ATGCGCAGGAGCTTCGCGGGGTTAGCTACGGCTGTGATCATCCGAGCTTC
CTTCAACCCGCAGTCCGCTTCGGCGGTAGGGCTGTACAGGCCCAGGCTGG
ATAGGGGAACGGCAACGAGCCGCCAGCTGGAGAAGCAAGAGGCGAAGAAG
CAGGAGCGGATACGCGAGGAGGTTCAGAAGGAGCATGAGGAAAAGCTCGG
CTCTGCTGAGGAGATCTACGGAGAACAGGCAGCGCCGGCGGCGGTTTCGA
CCGCAGGAGAAGTCGTAGATCAGCTGGAGAAGCAAGAGGCGAAGAAGCAG
GAGCGGATACGCGAGGAGGTTCAGAAGGAGCATGAGGAAAAGCTCGGCTC
TGCTGAGGAGATCTACGGAGAACAGGCAGCGCCGGCGGCGGTTTCGACCG
CAGGAGAAGTCGTAGATCAGGCAGGAGAAGCCACGGTAGAACGGGCGCAG
GCGACGACGGGGAGGCCAGAAATCATATCGCGCATCAGCGATGAAACGGT
GGCTAAGATTTGCGCGCTTCCGACCCCTGAGGCTCAGGAACGAGCCCTGC
AGATGCTCCTCAAGGAGGACTATCCAAAGGCAGGAGAAGCCACGGTAGAA
CGGGCGCAGGCGACGACGGGGAGGCCAGAAATCATATCGCGCATCAGCGA
TGAAACGGTGGCTAAGATTTGCGCGCTTCCGACCCCTGAGGCTCAGGAAC
GAGCCCTGCAGATGCTCCTCAAGGAGGACTATCCAAAGGTCTGGAGGAAG
TTAACGACGCAGCAGCGCGCCGCCATCACCAAGCTGAGGGTCGAGAACAA
GACGTTCAAGGCCGTATCTATCGGGGACATGAGGAAGAGAGGAAAACGGT
CTGGAGGAAGTTAACGACGCAGCAGCGCGCCGCCATCACCAAGCTGAGGG
TCGAGAACAAGACGTTCAAGGCCGTATCTATCGGGGACATGAGGAAGAGA
GGAAAACGCGACTTGTCCCCGCTTGGTCTGACCTTCTCGGCCTTCCTGTT
CGTCACGGGCATGCGGGCGAGCCTCAGGAGCATGTCAAACCAAAGGAAGA
GGCGACTTGTCCCCGCTTGGTCTGACCTTCTCGGCCTTCCTGTTCGTCAC
GGGCATGCGGGCGAGCCTCAGGAGCATGTCAAACCAAAGGAAGAGGGTGA
AAGTGGAGTCGGCAAAGTTTGATGCCGAAAGGGACGAATTCATGAACGTC
GACGGAGAGGCTGAGTTTGACGTCGACATCATGAAGGAACTCAGGTGAAA
GTGGAGTCGGCAAAGTTTGATGCCGAAAGGGACGAATTCATGAACGTCGA
CGGAGAGGCTGAGTTTGACGTCGACATCATGAAGGAACTCAGGGACATGA
AGGAGAAGATGGCCGGGCCGGGAGATAAATACGCCAAGGACACCCGGGCC
TACAACCCCGACTTTGCCGCGGCTGCGGGCGACGAGGAAGAGTACGACAA
GAAGATCAAGGAGGGACATGAAGGAGAAGATGGCCGGGCCGGGAGATAAA
TACGCCAAGGACACCCGGGCCTACAACCCCGACTTTGCCGCGGCTGCGGG
CGACGAGGAAGAGTACGACAAGAAGATCAAGGAGGCTTTGGAGGGCACCG
GCAAGGCCGGAAAGTCGAACAAAGGCGAGACAAGGAAAGTGTTCACCAAC
GAACCTACCACCGGTCCGACCGCGGCTTCCGGGGACCAAGACCTGCTGGG
TGGCGATGACAATGCCGGGGCCGACACGAACGGGGCTGCCGCAAGCGCGG
CTGCGGAGGTACGTAGGGCTTTGGAGGGCACCGGCAAGGCCGGAAAGTCG
AACAAAGGCGAGACAAGGAAAGTGTTCACCAACGAACCTACCACCGGTCC
GACCGCGGCTTCCGGGGACCAAGACCTGCTGGGTGGCGATGACAATGCCG
GGGCCGACACGAACGGGGCTGCCGCAAGCGCGGCTGCGGAGGTACGTAGG